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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000348_pilon:249595..251041- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043880 ID=XLOC_043880|Name=XLOC_043880|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1447bp|location=Sequence derived from alignment at sc0000348_pilon:249595..251041- (Clytia hemisphaerica_ch_hm2_pilon)
GGTAATGATAAGCTTCGAACAAAGGGTAATGTTTTGATCAGAGACTTTTT
TGAAAAAAACCCTGACTCATAGCTGAAAACAATAACAATTTTTCAAATGA
CAATGGTACACTTCTTGCGCTTCAAATTCACGTAATAATCATACCTTTAA
AGAATTAATTTTGATGAAAACTAATCTTGAAAATTTTAAGTTAGGTCATT
CCAAAATCAAGCAAAATTTAGTACGTTTTCTATCGCAAAAATATGATATT
TTTCTTACCAAAATCCCTCATTTGTTGCTTTTTAGTTTCTCAACAAAGAT
ATCTCCAAGGTAGCTAATAATATTTTATTGCGTTTCAGTGAGCACCATGC
ATCACTTCAACAACACAACGATGGCGTTCCCTGTATGGTCGGATGAATTA
GACCCGCTTTCCATCAGTGTGGCGGCAACCAACATCTTTGCTGGCTGTTT
CAGTCTCATCGGAAACACTCTGGTTATTGCGGTCATGTTGAAAAGATTCC
GGACAGCATCCACCTTCAAGAAACTATTGGCGCATTTAGCATTTTGTGAC
ATCATCTATGCGATCTCTATATTACTGGATACGCCCAACTGGCTTAAGAA
GCACTGGGTGTATACGCCCATGTTCTGTAAAGTACTCCCTACCACCCAAT
TCGCTTCCAGTTTGGCAGCGGAAGGAACAGTCGTTGTTATAGCAATAGAA
AGATATCGTGGAATCACACAACCATTGAAAGTACATTGGAACAATCGAGA
TTTTTCATTTTCCTTGATCATAGCTTGGCTGTTTGCTTTCGTCTCTGCTT
CACCTTATTTCAACGTCTTAAACACAGTAACCATACCATATATGGGCAAC
CATACTTTCTGTATCGAAACTTGGAGCACAGGAGATCATATCGATCAAGA
AAATTCCGCTTTCATTTACTCTACCTATACATTTGTGGGCACCTTCATGT
TACCGATGGTCATTTTAGCGGTATTGTACGGGCGAATCATTTACATTATT
CGCAAACCGATTGATCCTATCCCATGTTTTGAACAACTTTTCATAAAACG
ACGCGAAAAAGACATCAGAATCACCAAACTTTTGATTCTAGTTATTGTGG
CGTTCGCCATTTGCGTTTTACCCAACCAAATTGGACACTTTATAATGTCG
AAGGCGACGCTTTCAAAATCTGAAAAAGAAATTCTTGCTTATGTTCTATT
GATTCCATACCCTTTCCAATGTGTTTTGAATCCTCTCATATATTCCATTG
TGGATAAGAAGTTTAGAAAAGACGCAAAACTAATTTTATCGTGTCAAGGG
GATAAAGAGCGGAAGATTTCTCGAACAATGACCTCTTACTTTATGGTGGA
AAGTACATGTCACAAGAAGACATCGCATAGTGGAGAGACATCTATTTGTT
CGATGCCTTTGAGGACATCTCGTGAAGAAAGTGAAAGCTTATTCTGA Coding sequence (CDS) from alignment at sc0000348_pilon:249595..251041- >XLOC_043880 ID=XLOC_043880|Name=XLOC_043880|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2268bp|location=Sequence derived from alignment at sc0000348_pilon:249595..251041- (Clytia hemisphaerica_ch_hm2_pilon)
GGTAATGATAAGCTTCGAACAAAGGGGTAATGATAAGCTTCGAACAAAGG
TGAGCACCATGCATCACTTCAACAACACAACGATGGCGTTCCCTGTATGG
TCGGATGAATTAGACCCGCTTTCCATCAGTGTGGCGGCAACCAACATCTT
TGCTGGCTGTTTCAGTCTCATCGGAAACACTCTGGTTATTGCGGTCATGT
TGAAAAGATTCCGGACAGCATCCACCTTCAAGAAACTATTGGCGCATTTA
GCATTTTGTGACATCATCTATGCGATCTCTATATTACTGGATACGCCCAA
CTGGCTTAAGAAGCACTGGGTGTATACGCCCATGTTCTGTAAAGTACTCC
CTACCACCCAATTCGCTTCCAGTTTGGCAGCGGAAGGAACAGTCGTTGTT
ATAGCAATAGAAAGATATCGTGGAATCACACAACCATTGAAAGTACATTG
GAACAATCGAGATTTTTCATTTTCCTTGATCATAGCTTGGCTGTTTGCTT
TCGTCTCTGCTTCACCTTATTTCAACGTCTTAAACACAGTAACCATACCA
TATATGGGCAACCATACTTTCTGTATCGAAACTTGGAGCACAGGAGATCA
TATCGATCAAGAAAATTCCGCTTTCATTTACTCTACCTATACATTTGTGG
GCACCTTCATGTTACCGATGGTCATTTTAGCGGTATTGTACGGGCGAATC
ATTTACATTATTCGCAAACCGATTGATCCTATCCCATGTTTTGAACAACT
TTTCATAAAACGACGCGAAAAAGACATCAGAATCACCAAACTTTTGATTC
TAGTTATTGTGGCGTTCGCCATTTGCGTTTTACCCAACCAAATTGGACAC
TTTATAATGTCGAAGGCGACGCTTTCAAAATCTGAAAAAGAAATTCTTGC
TTATGTTCTATTGATTCCATACCCTTTCCAATGTGTTTTGAATCCTCTCA
TATATTCCATTGTGGATAAGAAGTTTAGAAAAGACGCAAAACTAATTTTA
TCGTGTCAAGGGGATAAAGAGCGGAAGATTTCTCGAACAATGACCTCTTA
CTTTATGGTGGAAAGTACATGTCACAAGAAGACATCGCATAGTGGAGAGA
CATCTATTTGTTCGATGCCTTTGAGGACATCTCGTGAAGAAAGTGAAAGC
TTATTCTGATGAGCACCATGCATCACTTCAACAACACAACGATGGCGTTC
CCTGTATGGTCGGATGAATTAGACCCGCTTTCCATCAGTGTGGCGGCAAC
CAACATCTTTGCTGGCTGTTTCAGTCTCATCGGAAACACTCTGGTTATTG
CGGTCATGTTGAAAAGATTCCGGACAGCATCCACCTTCAAGAAACTATTG
GCGCATTTAGCATTTTGTGACATCATCTATGCGATCTCTATATTACTGGA
TACGCCCAACTGGCTTAAGAAGCACTGGGTGTATACGCCCATGTTCTGTA
AAGTACTCCCTACCACCCAATTCGCTTCCAGTTTGGCAGCGGAAGGAACA
GTCGTTGTTATAGCAATAGAAAGATATCGTGGAATCACACAACCATTGAA
AGTACATTGGAACAATCGAGATTTTTCATTTTCCTTGATCATAGCTTGGC
TGTTTGCTTTCGTCTCTGCTTCACCTTATTTCAACGTCTTAAACACAGTA
ACCATACCATATATGGGCAACCATACTTTCTGTATCGAAACTTGGAGCAC
AGGAGATCATATCGATCAAGAAAATTCCGCTTTCATTTACTCTACCTATA
CATTTGTGGGCACCTTCATGTTACCGATGGTCATTTTAGCGGTATTGTAC
GGGCGAATCATTTACATTATTCGCAAACCGATTGATCCTATCCCATGTTT
TGAACAACTTTTCATAAAACGACGCGAAAAAGACATCAGAATCACCAAAC
TTTTGATTCTAGTTATTGTGGCGTTCGCCATTTGCGTTTTACCCAACCAA
ATTGGACACTTTATAATGTCGAAGGCGACGCTTTCAAAATCTGAAAAAGA
AATTCTTGCTTATGTTCTATTGATTCCATACCCTTTCCAATGTGTTTTGA
ATCCTCTCATATATTCCATTGTGGATAAGAAGTTTAGAAAAGACGCAAAA
CTAATTTTATCGTGTCAAGGGGATAAAGAGCGGAAGATTTCTCGAACAAT
GACCTCTTACTTTATGGTGGAAAGTACATGTCACAAGAAGACATCGCATA
GTGGAGAGACATCTATTTGTTCGATGCCTTTGAGGACATCTCGTGAAGAA
AGTGAAAGCTTATTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000348_pilon | genome | sc0000348_pilon:249595..251041 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 28-1134:1108 |
| Aaloc | 1-24:1448 |
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