XLOC_043872 (mRNA) -

Overview
NameXLOC_043872
Unique NameXLOC_043872
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000111_pilon:745466..746503+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043872 ID=XLOC_043872|Name=XLOC_043872|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1038bp|location=Sequence derived from alignment at sc0000111_pilon:745466..746503+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCGAGTCCGCTCAAAGAATCTATCAGTGACCAACAAAGCAAGAAG TATGGAGCATACACCACAAGATATGCAAGAACTCAATGAAGAAATGCTTT CTTATAGCATGGAGCATGCACCACATTCACCATCAGGTCATCGGCACCGT CACGGCTCCACCTCGATGACCATGCAAAGTGGCTTTTCAGACGAGAGCGG TGTTGACAAATCGGATAAAATCAAACGCCCTATGAACGCCTTCATGCTTT GGTCGAAACTGAGACGTCGCGAGATTTCCAAAAATGACCCCACCATACAT AACGCTCAAATCAGTAAGCTGTTAGGTGAAGAATGGAAGGTCCTATCGAC AGAAGACAAGCAACCGTTCCTGAGAGAGTCACAAAAACTGATGGCCAAGC ACAAGAAGGAGCACCCCAACTATCGATACAAACCACGCAAAAATAAACAA GAGCGAGGTCATACATCAGGAGGTGGATCATACCATCAGAAAGCTTTCTC CTTACCAAGCCAAGCTAAACCGTATATGAAATACTCTTCATATCACCACC ATTACAGACCATCGCAATCACGTTCGATGGTGGATGATCGTAGACCACCG TCACCGCCCACACACCACCCGGTTGTTTATTATCAATACCGTAAATGTCA CGTGCCCGGTTGCTACGATTGTGAATATCAACGCGCCTATGAGTCGCACG GTCCAAGTCCGCCATCTTTCTGTTGCCGTGGTAGCGGTTATGAAAAATCG AACACGCATGCGTCGAGACGTTGCATGTGTTGCTCTCCACCACCCTATCA CCAACCCGCCTGCATGGGGTGTAACCGCCAAAGCCCACCACCACCCTCCT CAAATCAGCAACGAAATAACAGCTTTACAGTTGAATCTCTCATCAACGAT CGAGGCTATAACTCATCTGGTAAATCGACATGCACTAGCTCGTGTTCCAA TGGATCGACGTCACCAAGCACCAGCCTAAGGTCGTCAGCAGAGAATGACA CAAAGGGATCGGATGGGTCTGGGCCCGAAGAATCTTAA

Coding sequence (CDS) from alignment at sc0000111_pilon:745466..746503+

>XLOC_043872 ID=XLOC_043872|Name=XLOC_043872|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2076bp|location=Sequence derived from alignment at sc0000111_pilon:745466..746503+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCGAGTCCGCTCAAAGAATCTATCAGTGACCAACAAAGCAAGAAG
TATGGAGCATACACCACAAGATATGCAAGAACTCAATGAAGAAATGCTTT
CTTATAGCATGGAGCATGCACCACATTCACCATCAGGTCATCGGCACCGT
CACGGCTCCACCTCGATGACCATGCAAAGTGGCTTTTCAGACGAGAGCGG
TGTTGACAAATCGGATAAAATCAAACGCCCTATGAACGCCTTCATGCTTT
GGTCGAAACTGAGACGTCGCGAGATTTCCAAAAATGACCCCACCATACAT
AACGCTCAAATCAGTAAGCTGTTAGGTGAAGAATGGAAGGTCCTATCGAC
AGAAGACAAGCAACCGTTCCTGAGAGAGTCACAAAAACTGATGGCCAAGC
ACAAGAAGGAGCACCCCAACTATCGATACAAACCACGCAAAAATAAACAA
GAGCGAGGTCATACATCAGGAGGTGGATCATACCATCAGAAAGCTTTCTC
CTTACCAAGCCAAGCTAAACCGTATATGAAATACTCTTCATATCACCACC
ATTACAGACCATCGCAATCACGTTCGATGGTGGATGATCGTAGACCACCG
TCACCGCCCACACACCACCCGGTTGTTTATTATCAATACCGTAAATGTCA
CGTGCCCGGTTGCTACGATTGTGAATATCAACGCGCCTATGAGTCGCACG
GTCCAAGTCCGCCATCTTTCTGTTGCCGTGGTAGCGGTTATGAAAAATCG
AACACGCATGCGTCGAGACGTTGCATGTGTTGCTCTCCACCACCCTATCA
CCAACCCGCCTGCATGGGGTGTAACCGCCAAAGCCCACCACCACCCTCCT
CAAATCAGCAACGAAATAACAGCTTTACAGTTGAATCTCTCATCAACGAT
CGAGGCTATAACTCATCTGGTAAATCGACATGCACTAGCTCGTGTTCCAA
TGGATCGACGTCACCAAGCACCAGCCTAAGGTCGTCAGCAGAGAATGACA
CAAAGGGATCGGATGGGTCTGGGCCCGAAGAATCTTAAATGAAGCGAGTC
CGCTCAAAGAATCTATCAGTGACCAACAAAGCAAGAAGTATGGAGCATAC
ACCACAAGATATGCAAGAACTCAATGAAGAAATGCTTTCTTATAGCATGG
AGCATGCACCACATTCACCATCAGGTCATCGGCACCGTCACGGCTCCACC
TCGATGACCATGCAAAGTGGCTTTTCAGACGAGAGCGGTGTTGACAAATC
GGATAAAATCAAACGCCCTATGAACGCCTTCATGCTTTGGTCGAAACTGA
GACGTCGCGAGATTTCCAAAAATGACCCCACCATACATAACGCTCAAATC
AGTAAGCTGTTAGGTGAAGAATGGAAGGTCCTATCGACAGAAGACAAGCA
ACCGTTCCTGAGAGAGTCACAAAAACTGATGGCCAAGCACAAGAAGGAGC
ACCCCAACTATCGATACAAACCACGCAAAAATAAACAAGAGCGAGGTCAT
ACATCAGGAGGTGGATCATACCATCAGAAAGCTTTCTCCTTACCAAGCCA
AGCTAAACCGTATATGAAATACTCTTCATATCACCACCATTACAGACCAT
CGCAATCACGTTCGATGGTGGATGATCGTAGACCACCGTCACCGCCCACA
CACCACCCGGTTGTTTATTATCAATACCGTAAATGTCACGTGCCCGGTTG
CTACGATTGTGAATATCAACGCGCCTATGAGTCGCACGGTCCAAGTCCGC
CATCTTTCTGTTGCCGTGGTAGCGGTTATGAAAAATCGAACACGCATGCG
TCGAGACGTTGCATGTGTTGCTCTCCACCACCCTATCACCAACCCGCCTG
CATGGGGTGTAACCGCCAAAGCCCACCACCACCCTCCTCAAATCAGCAAC
GAAATAACAGCTTTACAGTTGAATCTCTCATCAACGATCGAGGCTATAAC
TCATCTGGTAAATCGACATGCACTAGCTCGTGTTCCAATGGATCGACGTC
ACCAAGCACCAGCCTAAGGTCGTCAGCAGAGAATGACACAAAGGGATCGG
ATGGGTCTGGGCCCGAAGAATCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043872XLOC_043872-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000111_pilongenomesc0000111_pilon:745466..746503 +
Properties
Property NameValue
Aaloc1-1038:1