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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000111_pilon:483557..486595- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043867 ID=XLOC_043867|Name=XLOC_043867|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3039bp|location=Sequence derived from alignment at sc0000111_pilon:483557..486595- (Clytia hemisphaerica_ch_hm2_pilon)
AAACCAAGCTGTGACGTCAAAGTTGATGTTGGATTCGTGCTCGACTCATC
AGGCAGTTTGAAAGACGATTACGGCAAAGAAAAGAGCTTCTTGAAGGCTT
TGGCAGCGACTTTCGGTGTCAGCGAACAAGGTGCGAGAGCAGGAGTGGTG
ACATTCAGTTTTGACGCAGAACACAGCGTCAAACTGAACGACCATTACGA
TTTGGCGAGCTTCAATGATGCTGTTGACAACATTCCACTGATGGGATACA
CGACAAGAATCGATAAAGCTCTTCGTCTGACTCAGAGCCAAATGTTTTCC
ATCGCAAATGGAGGCAGACCTGGTGTGAGCAAAGTTGTGGTTTTGTTGAC
AGACGGCTCACAAACTCAAGACGCTGGTGCTGAAAATCCTGCAGTTGTGG
CTGAAGAACTTCGATCACAGGGCTACAAAGTGTTGGCCGTCGGTATCGGA
GGTGGCGTCAACAGTACAGAGTTGGCTCCAATTACTGGTGCTCAATCAAA
TGTGTTTTCTGCAGCGACTTTTGACGAGCTTATCAGTCAAGAATTTTTGG
ACAAACTCAACCAAGCTGGATGCAAAGAAGGTAGGTTGGGTGGAATCTTT
TTAGAAAGATCTCCTTTTGTTATACTGTGTTTTGGTTTTCACGGATGACT
GTTGTTTGTAGTCTTCAAAAAGGGGAATATTGTATTTTGGATTCGATTCT
CACTCTACAAGATTTTCTTCCACCAGAGAAGAGCAGGTGAATCACATACC
GTACCATTTGAACAGCTTTAGAATGAAGATTTTCGAATGTTCTTTCTATT
TTAGCCAAGAGGGAAGTGAACCAAGCTGTGACGTCAAAGTTGATGTTGGA
TTCGTGCTCGACTCATCAGGCAGTTTGAAAGACGATTACGGCAAAGAAAA
AGAGCTTCTTGAAGGCTTTGGCAGCGACTTTCGGTGTCAGCGAACAAGGT
GCGAGAGCAGGAGTGGTGACATTCAGTTTTGACGCAGAACACAGCGTCAA
ACTGAACGACCATTACGATTTGGCGAGATTCAATGATGCTGTTGACAACA
TTCCACTGATGGGATACACGACAAGAATCGATAAAGCTCTTCGTCTGACT
CAGAGCCAAATGTTTTCCATCGCAAATGGAGGCAGACCTGGTGTGAGCAA
AGTTGTGGTTTTGTTGACAGACGGCTCACAAACTCAAGACGCTGGTGCTG
AAAATCCTGCAGTTGTGGCTGAAGAACTTCGATCACAGGGCTACAAAGTG
TTGGCCGTCGGTATCGGAGGGTGGCGTCAACAGTACAGAGTTGGCTCACA
TTACTGGTGCTCAATCAAATGTGTTTTCTGCAGCGACTTTTCGACGAGCT
TATCAGTCAAGAATTTTTGGACAAACTCAACCAAAGCTGGATGCAAAGAA
GGTAGGTTGAGTGGAATCTTTTTAGAAAGATCTCCTTTTGTTATACTGTG
TTTTGGTTTTCACGGATGACTGTTGTTTGTAGTCTTCAAAAAGGGGAATA
TTGTATTTTGGATTCGATTCTCACTCTACAAGATTTTCTTCCACCAGAGA
AGAGCAGGTGAATCACATACCGTACCATTTGAACAGCTTTAGAATGAAGA
TTTTCGAATGTTCTTTCTATTTTAGCCAAGAGGGAAGTGAAACCAAGCTG
TGACGTCAAAGTTGATGTTGGATTCGTGCTCGACTCATCAGGCAGTTTGA
AAGACGATTACGGCAAAGAAAAGAGCTTCTTGAAGGCTTTGGCAGCGACT
TTCGGTGTCAGCGAACAAGGTGCGAGAGCAGGAGTGGTGACATTCAGTTT
TGACGCAGAACACAGCGTCAAACTGAACGACCGTTTACGATTTGGCGAGC
TTCAATGATGCTGTTGACAACATTCCACTGATGGGATACACGACAAGAAT
CGATAAAGCTCTTCGTCTGACTCAGAGCCAAATGTTTTCCATCGCAAATG
GAGGCAGACCTGGTGTGAGCAAAGTTGTGGTTTTGTTGACAGACGGCTCA
CAAACTCAAGACGCTGGTGCTGAAAATCCTGCAGTTGTGGCTGAAGAACT
TCGATCACAGGGCTACAAAGTGTTGGCCGTCGGTATCGGAGGTGGCGTCA
ACAGTACAGAGTTGGCTCACATTACTGGTGCTCAATCAAATGTGTTTTCT
GCAGCGACTTTCGACGAGCTTATCAGTCAAGAATTTTTGGACAAACTCAA
CCAAGCTGGATGCAAAGAAGGTAGGTTGGGTGGAATCTTTTTAGAAAGAT
CTCCTTTTGTTATACTGTGTTTTGGTTTTCACGGATGACTGTTGTTTTGT
AGTCTTCAAAAAAGGGGAATATTGTATTTTGGATTCGATTCTCACTCTAC
AAGATTTTCTTCCACCAGAGAAGAGCAGGTGAATCACATACCGTACCATT
TGAACAGCTTTAGAATGAAGATTTTCGAATGTTCTTTCTATTTTAGCTAA
GAGGGAAGTGAAACCAAGCTGTGACGTCAAAGTTGATGTTGGATTCGTGC
TCGACTCATCAGGCAGTTTGAAAGACGATTACGGCAAAGAAAAGAGCTTC
TTGAAGGCTTTGGCAGCGACTTTTGGTGTCAGCGAACAAGGTGCGAGAGC
AGGAGTGGTGACATTCAGTTTTGACGCAGAACACAGCGTCAAACTGAACG
ACCATTACGATTTGGCGAGCTTCAATGATGCTGTTGACAACATTCCACTG
ATGGGATACACGACAAGAATCGATAAAGCTCTTCGTCTGACTCAGAGCCA
AATGTTTTCCATCGCAAATGGAGGCAGACCTGGTGTGAGCAAAGTTGTGG
TTTTGTTGACAGACGGCTCACAAACTCAAGACGCTGGTGCTGAAAATCCT
GCAGTTGTGGCTGAAGAACTTCGATCACAAGGCTACAAAGTGTTGGCCGT
CGGTATAGGAGATGGAATCAAGGCTGTTGAACTGCAAGGGATTGCAGGTT
CTATTGACAATATTTACATTTCCTCTTCGTTTGATGAATTGATACAACCA
CAGTTTTTAAAAACCGTTACAGATGCTTCCTGTAAATTA Coding sequence (CDS) from alignment at sc0000111_pilon:483557..486595- >XLOC_043867 ID=XLOC_043867|Name=XLOC_043867|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1398bp|location=Sequence derived from alignment at sc0000111_pilon:483557..486595- (Clytia hemisphaerica_ch_hm2_pilon)
AAACCAAGCTGTGACGTCAAAGTTGATGTTGGATTCGTGCTCGACTCATC
AGGCAGTTTGAAAGACGATTACGGCAAAGAAAAGAGCTTCTTGAAGGCTT
TGGCAGCGACTTTCGGTGTCAGCGAACAAGGTGCGAGAGCAGGAGTGGTG
ACATTCAGTTTTGACGCAGAACACAGCGTCAAACTGAACGACCATTACGA
TTTGGCGAGCTTCAATGATGCTGTTGACAACATTCCACTGATGGGATACA
CGACAAGAATCGATAAAGCTCTTCGTCTGACTCAGAGCCAAATGTTTTCC
ATCGCAAATGGAGGCAGACCTGGTGTGAGCAAAGTTGTGGTTTTGTTGAC
AGACGGCTCACAAACTCAAGACGCTGGTGCTGAAAATCCTGCAGTTGTGG
CTGAAAAACCAAGCTGTGACGTCAAAGTTGATGTTGGATTCGTGCTCGAC
TCATCAGGCAGTTTGAAAGACGATTACGGCAAAGAAAAGAGCTTCTTGAA
GGCTTTGGCAGCGACTTTCGGTGTCAGCGAACAAGGTGCGAGAGCAGGAG
TGGTGACATTCAGTTTTGACGCAGAACACAGCGTCAAACTGAACGACCAT
TACGATTTGGCGAGCTTCAATGATGCTGTTGACAACATTCCACTGATGGG
ATACACGACAAGAATCGATAAAGCTCTTCGTCTGACTCAGAGCCAAATGT
TTTCCATCGCAAATGGAGGCAGACCTGGTGTGAGCAAAGTTGTGGTTTTG
TTGACAGACGGCTCACAAACTCAAGACGCTGGTGCTGAAAATCCTGCAGT
TGTGGCTGAAAGCCAAATGTTTTCCATCGCAAATGGAGGCAGACCTGGTG
TGAGCAAAGTTGTGGTTTTGTTGACAGACGGCTCACAAACTCAAGACGCT
GGTGCTGAAAATCCTGCAGTTGTGGCTGAAGAACTTCGATCACAAGGCTA
CAAAGTGTTGGCCGTCGGTATAGGAGATGGAATCAAGGCTGTTGAACTGC
AAGGGATTGCAGGTTCTATTGACAATATTTACATTTCCTCTTCGTTTGAT
GAATTGATACAACCACAGTTTTTAAAAACCGTTACAGATGCTTCCTGTAA
ATTAAGCCAAATGTTTTCCATCGCAAATGGAGGCAGACCTGGTGTGAGCA
AAGTTGTGGTTTTGTTGACAGACGGCTCACAAACTCAAGACGCTGGTGCT
GAAAATCCTGCAGTTGTGGCTGAAGAACTTCGATCACAAGGCTACAAAGT
GTTGGCCGTCGGTATAGGAGATGGAATCAAGGCTGTTGAACTGCAAGGGA
TTGCAGGTTCTATTGACAATATTTACATTTCCTCTTCGTTTGATGAATTG
ATACAACCACAGTTTTTAAAAACCGTTACAGATGCTTCCTGTAAATTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000111_pilon | genome | sc0000111_pilon:483557..486595 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 406-699:295 |
| Aaloc | 1-405:3040 |
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