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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000111_pilon:381621..385521+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043864 ID=XLOC_043864|Name=XLOC_043864|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3901bp|location=Sequence derived from alignment at sc0000111_pilon:381621..385521+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTAGGCGCCCGATGCTTTTGTGTTCCGCCTCATTCTACCACCAC
CGTAGAGTAAGTTTGAAAAACTGTTTTCTCCCAAGGTACATTTGGCTGTT
TCATTTAATATCAAAGCAGGGGGTGTACGAATCTTTCCTAgctaaaaaaa
tcttgaaattttgtgGATAATcctggaaaatagcaaaattttcgaaaagc
tCTCTGTTGtccatcgaaaaattgaaatctaaacGAGCTAACCATAATGC
TTAGTCATTCCTTGGAAGCaattagcaaaaaaaaactataatcAAGCTGC
CTTGTAAAATGCAAAATAATCCCCCCtagaatttcttctttttggacCAC
CTGGAAATGTTTACACACCCATGTACGAATAGAAAATGGAATGACCCATC
GTCAACGCTTCGTTTCAATCTATCTTTTCTTCCGTACCTAATTCAGATGG
TTTGAGCGATTCATTTTGTCTGTACATTTGTGAGTCTGCTACTCAAAGGG
ACCACAGAAGGAGTCTACAAGCTaaatatttcaaaccatctgattatctc
tTTCAGGTAATCAAAAAAGTTTAGGGTTTTGATGGCTAAGCTGTGTAGAG
ATTAGTAAATATTTAGTAACATTCGCTTTTCATTATGACTAGAATATGAG
ATTTTGAGTTACTCTCCAGTCaaaattcatatttcaaaacttctaAAATA
AGCTAAAGCATGTTGCTTTTCATGTGAacagaaaataacttttttttcca
tCTTATTTTTCAGTATTAAAGATCTTGCAATTCGtcgaattttacaaaaa
tactttCGCTACTTTATCAAGAAACTCACGGACGAGAATGGCAACCTTTA
CACTGCAGAAGATATTCATCAAgtttatgatttcaaaaaatcgatcGAAA
GTCAACTCGATTTAGACAATTTACCAAAGGAAGCTCACAAGGGATATAAA
CAAGGCAAAGAGAACAAAGGTGAGTGTCACCGCCGATTTGTGTAATTGAA
ATATCTGGGTGTTCCTAACAATTCTCTGGTATATATATGATTATCGTCCA
CCTCTAAGCAAAACGCACTGTCGAttatttttagatatccgatagcaaga
tatctcttctgtagcagcgagcataaagaaaatgtttattgatcaaataa
ttatttaaatgtcacagataaaaaaacagataaacagaaagaaattcgaa
cgttttgtaattaattttgatttttcttgtcgaatatctgcttaatattc
CCCAAATAGTTCACTTCTTCATACCAGTATATGATTATTCGTCTATCTGC
CCTTGTTTGGTAATGAGATGTTCCATTTAATATCCATTCACAGCTAGTGA
TTCTTTTAACCACATTGAGCTGGGGCCGTTTTTGTAAACTTAGATTGAAT
TTCTAATATGCCTGAAAGGGAACTTGCTCAGCAAAGCTGTACATTTGTGA
ATGTTGGGGGCATTGTGGTTGTTCAGAGGGCGAACTCTCGAAGACTCTTG
TATATTTAGATGATAATTAGTTATTGTTGctcataaacaacaaaaaatat
taagttCTCATTTATTTTGGATTGAGTTTCAAAGACTCAATCTTGAGTAT
TTTGGCCGGTATACGGACacaaaagtgcttagaaaaccCCTAACAAtttt
tttGGTTATCCCCTGGAAATATGGTAATCTTGCGAAAGGCCCCTCGAAAA
GGGATAATTGTCCttggaaaaattgttttatacCGTAAAGTGAGGATAGA
ACTATAATCTTTTGCccctttgaaatttgaaaatcgacttttaTTCAGGG
GTATTCCTTAGAAATTTAAATCAGGTCCCTTCTCAAAAACCTTTATGGAA
CCCTTTGATATAAAGGAACATATCATTTCACagtttaaaaaacttttgtt
cTTCCTTTATAGCTATCCGAGAATTATGCGAACTTATCAGTTTAAAGGAA
GTGTATTTGAAAATCGACATCTTTATTCTTCCTTCGTCACAAGAAGAAAA
GAACCTTCTATCCTTCCCAAGACAAGATCAGTTGAAAATGCTGCACGAGA
ATTATAGAAAATTAGCAACGCTCGCTCCCAAGTGTATTCAGGAACCAGGA
AATGGGAAACCAGCCGACGAAGAAACGCCCATAAACAGTGTGCCAAATCA
TATCACGTCCAATGACAGGAGCAATAACGCCCAGCCAAACTTGTTTCGAC
AAACTGGAGACGCAGACCAAAGCATTTCGTTAATCACTCCAGAAGTATCC
CAAATGGTCGCGGTGGAAAATTCTGAAGCACCGAGAAATCCTCTCGGAGG
CAACGGTGTTCAGGGGTTTGGCCAAAAGAATAACTATCCTAGTGCAAATG
CTCTTTTCTCCCAAACATCTAACTTGATGGAAAAGCAAAGGAATGATCAT
ACTTCACAATTCATGGTCAACTCTCACTGGAATACACCAATTGATGGTTA
TGCTTTCACACCATCTCAAACACAAATCCCAAACAATCCAACATATTTTC
AGACATACCAGAAAACGGAACTCAACCGACAAAGCATAGCTTTACGAAAC
ACTGAGTTTATGACTCAGACTCCAGCTATAACTGGATATGACCCAGACTC
TGTCCACCCTATAACTAGTCCCATGACCGATTCGCTACAACCAGACCACA
GACAAGTTGCGCATGCTCTATTGAATCAAGGCAACGATCAACTCTCAGGT
CAAGTTTTATCCCAATGTAATGATACCAGCCATTACCAAGATAAAACTTT
CACCTTTCCATCGCTGGTATACAACCAAAATAATGGTACTGCAAACTATA
ACCAATCAGCTCAACAAATGACAGCTTTCCTCCAGAACCAGGGGAATCAG
AATGTAAATATTGGAAGCTTCTTTAACACTGGGAACAAGCCAGTTCAACA
GAGCATTCATCTATGGAGCAGCAACAATCAACAAGCAAACCTTCAACACC
AGAATACAGTCGCTGTAGATTGCCAACAAGATCAACACACTTACTGTCCA
TCCTCAGAGCTGAACACCTTTCCACGCTATGCTTTCCAAGAGTCTCCCAG
CAATGGCCCCTGGATTTCACCTTGCATGGAAATCACGGCAACTGGGGACA
GCGAATACATCAATAAACCAATTAATGAGCTTTCACAACAAACTGTACAA
ATGAACGGTGAGTGGATTTTACTAAATGAAGCGCGGATCCCTCCTATTTT
CTTTATCAGTGTGAATAATAAGTcaacttatttttctttttggtttgact
caaaattttagaatttgacactttttttcttcacccgACCGCTGTAGAAA
ACTCTGCTCAGTTGCGTTAGTTAAATCTAAATCTTCTCTCAAGCTCGAAC
CAAAGCTCTGCGGATTGTTACTAAGCTTAAATATTATACACGACTCCAGA
TTTACCAAATCCATTTTTCTATTCTTAGAACCATCAAAAGCTgtcgaaaa
ttcatcaaattgtAAAAGCTTTGGACAAAGAACGTACAAAAATGCCTCAA
TAACCGCTGAGCACGAAGCTATATTCGAAGCGTTAGAGATACCTGTTACG
AACTACTCAAAACCGCCCACCACACGCCAACGTCAACGCCATATTAGAAA
TCCTTACAGTCAAGCACTTAAGATAAAACGGAAAACTCCAACAAGCAACA
CTGAGGCTATCTATCATCTACAAGTCGAATTTCCCACACCATCTTATTCA
TCTACCTTGACCACGACACAGGTAGAAGGTCACACTTCCTGtcaacaaaa
tttcgaaaatttccctATAAACATACCCGGTGAAGCTGTTTCCACAGAGT
TAGAAATACCGCCGGGTTTTGATTATCAAGACTATTTAAAAGATTGCGAC
AACTTTGAGTTACAATTACAATCACAATCGCCTACACCAATTGAATTATG
A Coding sequence (CDS) from alignment at sc0000111_pilon:381621..385521+ >XLOC_043864 ID=XLOC_043864|Name=XLOC_043864|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3960bp|location=Sequence derived from alignment at sc0000111_pilon:381621..385521+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTAGGCGCCCGATGCTTTTGTGTTCCGCCTCATTCTACCACCAC
CGTAGAATGGAAGTAGGCGCCCGATGCTTTTGTGTTCCGCCTCATTCTAC
CACCACCGTAGATATTAAAGATCTTGCAATTCGtcgaattttacaaaaat
actttCGCTACTTTATCAAGAAACTCACGGACGAGAATGGCAACCTTTAC
ACTGCAGAAGATATTCATCAAgtttatgatttcaaaaaatcgatcGAAAG
TCAACTCGATTTAGACAATTTACCAAAGGAAGCTCACAAGGGATATAAAC
AAGGCAAAGAGAACAAAGTATTAAAGATCTTGCAATTCGtcgaattttac
aaaaatactttCGCTACTTTATCAAGAAACTCACGGACGAGAATGGCAAC
CTTTACACTGCAGAAGATATTCATCAAgtttatgatttcaaaaaatcgat
cGAAAGTCAACTCGATTTAGACAATTTACCAAAGGAAGCTCACAAGGGAT
ATAAACAAGGCAAAGAGAACAAAGCTATCCGAGAATTATGCGAACTTATC
AGTTTAAAGGAAGTGTATTTGAAAATCGACATCTTTATTCTTCCTTCGTC
ACAAGAAGAAAAGAACCTTCTATCCTTCCCAAGACAAGATCAGTTGAAAA
TGCTGCACGAGAATTATAGAAAATTAGCAACGCTCGCTCCCAAGTGTATT
CAGGAACCAGGAAATGGGAAACCAGCCGACGAAGAAACGCCCATAAACAG
TGTGCCAAATCATATCACGTCCAATGACAGGAGCAATAACGCCCAGCCAA
ACTTGTTTCGACAAACTGGAGACGCAGACCAAAGCATTTCGTTAATCACT
CCAGAAGTATCCCAAATGGTCGCGGTGGAAAATTCTGAAGCACCGAGAAA
TCCTCTCGGAGGCAACGGTGTTCAGGGGTTTGGCCAAAAGAATAACTATC
CTAGTGCAAATGCTCTTTTCTCCCAAACATCTAACTTGATGGAAAAGCAA
AGGAATGATCATACTTCACAATTCATGGTCAACTCTCACTGGAATACACC
AATTGATGGTTATGCTTTCACACCATCTCAAACACAAATCCCAAACAATC
CAACATATTTTCAGACATACCAGAAAACGGAACTCAACCGACAAAGCATA
GCTTTACGAAACACTGAGTTTATGACTCAGACTCCAGCTATAACTGGATA
TGACCCAGACTCTGTCCACCCTATAACTAGTCCCATGACCGATTCGCTAC
AACCAGACCACAGACAAGTTGCGCATGCTCTATTGAATCAAGGCAACGAT
CAACTCTCAGGTCAAGTTTTATCCCAATGTAATGATACCAGCCATTACCA
AGATAAAACTTTCACCTTTCCATCGCTGGTATACAACCAAAATAATGGTA
CTGCAAACTATAACCAATCAGCTCAACAAATGACAGCTTTCCTCCAGAAC
CAGGGGAATCAGAATGTAAATATTGGAAGCTTCTTTAACACTGGGAACAA
GCCAGTTCAACAGAGCATTCATCTATGGAGCAGCAACAATCAACAAGCAA
ACCTTCAACACCAGAATACAGTCGCTGTAGATTGCCAACAAGATCAACAC
ACTTACTGTCCATCCTCAGAGCTGAACACCTTTCCACGCTATGCTTTCCA
AGAGTCTCCCAGCAATGGCCCCTGGATTTCACCTTGCATGGAAATCACGG
CAACTGGGGACAGCGAATACATCAATAAACCAATTAATGAGCTTTCACAA
CAAACTGTACAAATGAACGCTATCCGAGAATTATGCGAACTTATCAGTTT
AAAGGAAGTGTATTTGAAAATCGACATCTTTATTCTTCCTTCGTCACAAG
AAGAAAAGAACCTTCTATCCTTCCCAAGACAAGATCAGTTGAAAATGCTG
CACGAGAATTATAGAAAATTAGCAACGCTCGCTCCCAAGTGTATTCAGGA
ACCAGGAAATGGGAAACCAGCCGACGAAGAAACGCCCATAAACAGTGTGC
CAAATCATATCACGTCCAATGACAGGAGCAATAACGCCCAGCCAAACTTG
TTTCGACAAACTGGAGACGCAGACCAAAGCATTTCGTTAATCACTCCAGA
AGTATCCCAAATGGTCGCGGTGGAAAATTCTGAAGCACCGAGAAATCCTC
TCGGAGGCAACGGTGTTCAGGGGTTTGGCCAAAAGAATAACTATCCTAGT
GCAAATGCTCTTTTCTCCCAAACATCTAACTTGATGGAAAAGCAAAGGAA
TGATCATACTTCACAATTCATGGTCAACTCTCACTGGAATACACCAATTG
ATGGTTATGCTTTCACACCATCTCAAACACAAATCCCAAACAATCCAACA
TATTTTCAGACATACCAGAAAACGGAACTCAACCGACAAAGCATAGCTTT
ACGAAACACTGAGTTTATGACTCAGACTCCAGCTATAACTGGATATGACC
CAGACTCTGTCCACCCTATAACTAGTCCCATGACCGATTCGCTACAACCA
GACCACAGACAAGTTGCGCATGCTCTATTGAATCAAGGCAACGATCAACT
CTCAGGTCAAGTTTTATCCCAATGTAATGATACCAGCCATTACCAAGATA
AAACTTTCACCTTTCCATCGCTGGTATACAACCAAAATAATGGTACTGCA
AACTATAACCAATCAGCTCAACAAATGACAGCTTTCCTCCAGAACCAGGG
GAATCAGAATGTAAATATTGGAAGCTTCTTTAACACTGGGAACAAGCCAG
TTCAACAGAGCATTCATCTATGGAGCAGCAACAATCAACAAGCAAACCTT
CAACACCAGAATACAGTCGCTGTAGATTGCCAACAAGATCAACACACTTA
CTGTCCATCCTCAGAGCTGAACACCTTTCCACGCTATGCTTTCCAAGAGT
CTCCCAGCAATGGCCCCTGGATTTCACCTTGCATGGAAATCACGGCAACT
GGGGACAGCGAATACATCAATAAACCAATTAATGAGCTTTCACAACAAAC
TGTACAAATGAACGAACCATCAAAAGCTgtcgaaaattcatcaaattgtA
AAAGCTTTGGACAAAGAACGTACAAAAATGCCTCAATAACCGCTGAGCAC
GAAGCTATATTCGAAGCGTTAGAGATACCTGTTACGAACTACTCAAAACC
GCCCACCACACGCCAACGTCAACGCCATATTAGAAATCCTTACAGTCAAG
CACTTAAGATAAAACGGAAAACTCCAACAAGCAACACTGAGGCTATCTAT
CATCTACAAGTCGAATTTCCCACACCATCTTATTCATCTACCTTGACCAC
GACACAGGTAGAAGGTCACACTTCCTGtcaacaaaatttcgaaaatttcc
ctATAAACATACCCGGTGAAGCTGTTTCCACAGAGTTAGAAATACCGCCG
GGTTTTGATTATCAAGACTATTTAAAAGATTGCGACAACTTTGAGTTACA
ATTACAATCACAATCGCCTACACCAATTGAATTATGAAACCATCAAAAGC
TgtcgaaaattcatcaaattgtAAAAGCTTTGGACAAAGAACGTACAAAA
ATGCCTCAATAACCGCTGAGCACGAAGCTATATTCGAAGCGTTAGAGATA
CCTGTTACGAACTACTCAAAACCGCCCACCACACGCCAACGTCAACGCCA
TATTAGAAATCCTTACAGTCAAGCACTTAAGATAAAACGGAAAACTCCAA
CAAGCAACACTGAGGCTATCTATCATCTACAAGTCGAATTTCCCACACCA
TCTTATTCATCTACCTTGACCACGACACAGGTAGAAGGTCACACTTCCTG
tcaacaaaatttcgaaaatttccctATAAACATACCCGGTGAAGCTGTTT
CCACAGAGTTAGAAATACCGCCGGGTTTTGATTATCAAGACTATTTAAAA
GATTGCGACAACTTTGAGTTACAATTACAATCACAATCGCCTACACCAAT
TGAATTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000111_pilon | genome | sc0000111_pilon:381621..385521 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1519-1989:3431 |
| Aaloc | 799-1515:2440 |
| Aaloc | 265-789:1915 |
| Aaloc | 58-261:765 |
| Aaloc | 1-54:1 |
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