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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000141_pilon:743676..746379- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043844 ID=XLOC_043844|Name=XLOC_043844|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2704bp|location=Sequence derived from alignment at sc0000141_pilon:743676..746379- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCAAACAAATCTTGATGTTATTTGTCATCCTCATATTGAGGACAAC
ACAAGGACAACAAGATGGAAATGATGAGAACTATGTGGTTACGTTGAATG
ATAGTGATTTTGAACATAAAACACAAATCTCAACTGGAATGACTACAGGC
GATTGGTTTATTTTGATGTAAGTTTGACTGGCACATCTCCCAATTTCTAA
TTTTGTTTAATTTTCGTCATTCACCATACCAGATTCAAATATTATATTAT
TTAATCTCGTTCCATGTTTATACTTGAAGACATTTCTACCCTGAAATGGG
GGGTCTTTTGGTCTTCCTCTCACCAAAGAGGAGGCCGTGCTACAGAATTG
GTTGGTTTCCCTTGAGCGTGGGTAAAATTTGAAATTCCACTGCGATGCTC
AAAGGTGGGAGTTTTGAATTTCCATTGAATTTTCATGGGGGAGGTCTTGA
CTTTTCGCATTTTATTTTAGGAAGTGGCCAATACCTTGACTGAATACTTA
AATCTCATCATTTTCACTTTTTTTTTTTCAATGCATGGTTGTTAGCTTCT
TAACGAGGTTGCAATATGCGAGTCCGTTGAGTTGTGGATGCAGTATCTTG
TATGGTGGACTTTGTTACTAACCATTACAATATAAATTTTCTTTTATTCC
AGGGCACCAAAGGGAGATTGTAAAAAGTGTGCAGGGATAGAAAAAATATT
GAAACAACTTTCAACTGAGTAAGTAATCCATAGATAGAAAAATACAAGAA
GCAATTGCATTTTTTAAGTTTTGGTTATTGAACCGCTTTGGCATTCCAGT
GTTTTCAATTTGAACTTTAATTCTTTGGTAATGTTTATATATTTACCTTT
GAACAATAGATTTCGAGGCAGAATCAACATTGCTGTTTTAGACCGTGACC
ACTCCAGACGTAAGTATCACATTTGTTTACCTCAAGGTAGAGGAAAGTGG
GGCAATTTTTAAAAGATTAAAATAAAAAATACGTTTTATATGACAATTAT
GATTTAATTAATTTAAGGATGAGACTTTTGCAAATGAGCAAATTCAAAAA
TCAGAAAATCACGACTTGCGGTAAGCTTAGCCCCACGTGGCAGTGTGCTA
ACTTGGGATTGGTATCTACCAATAGTGATAAACTAGTGTCTAACAATATC
AATTATGATTTATTATTGATGATTTGATATTGAATCTAAATGTCATTGTT
TTACTTTTTAGTGACTCAAAGAAGGTTCAAAATTAAAACACCTGTTCTTA
AATTGTGAGTGATTTTCATTTTATGGAAGATTTCTTATCAACCTTTAAAA
GAAAAGAATACCAATACCAACGTTGAAAAGATTCTTTCTTGCTTTTATTT
TTCAAGAAGTTTATGACTCCAATATGATCTTCTTCTTCTTCTTCTTCTTT
TTCAGCTTTCGAAGTGGTTTTCAATGGGAGTACAAAGGAATGGTAGCTCA
ATCCAATATCGCTAATTTTATCACTGGTGGATATCAATCCCAAACTGGAT
ATCGACCTCCTAAACCTATCGATGCTATGTAAGAGTTTTTATTTTTAAAT
TGCCTTTTTGCGATGCTAACTCGCGAAATTTTCAAAATCGTATGTTTGTT
TAAAGTTTGCATCTTCAGGGTCATTTTTCTCCGTTAAGTTCAGGTCCTTT
CATGAAATTAGATCCATATAATTTTTTAAAACGTTGACAAAATTGTAAAT
TCCCACCCATTGAAAAAGGTGATTTGACAAACTCCCTTATAATTTTTGCT
TCTTCATTTTATCTCTAAATTGCTAAGAAATTCTAACCGAGTGGCTGAGA
CAGAGGTGTAGTTCTACGAATACTGTACCTGTACCACTTAAATTTCTCAT
TTTATTTGCAGTGATGCGTGGCAAGAGGATTTCGTGAAAGAAATGAAGGT
CATTTATTTTTTATTGTCAAAATTTTATCAAAAAGGTTAGACATAACATT
ACCGTTAAATTTGTGCAACTGACGGTAGTTTGGGTGTAGAAAGTAACAAA
ATAGCGAAAAATACCACCAATATAGGATATTTTTTAGACTTTTACAAATT
TTTTAGTTTTGAATTTTTCGCGAGCATAAACCTTTGTGAATAGGCTGGAA
TAGGCCTGTTAAGAATGGGCTTTTCCAGAAATAGTCCGTGCCCCCCTGTT
GAGGATATCGGATATCCAGTGGGTCAACGATTTTTGTTCAAAAGTGGATA
TCTAGGGAGTTGAATATCTACAAGGGAGCGGATATCCAGGGGGTAAAGTG
TCTTTTCAAGTAAAAAATACGATATCCAGGGGTAAGCATCTTTATAAGAG
AGGATATCCAGGGGGTTGAGCATATTTTTTAGAGTGGAAATATATCGAAA
TATCAATATCCTCAACAGTGGGGGTAAATTTTTGTTCTGGAAAAGCCCAA
TTTTCAAAGGCTTTTTTTTGCAAAAAAAGGTAAAAAAAACACTGAAATCC
TGTAAGTTGACACGTCTAAAATATTCTTTAGTAGTAGTTATATACTACGT
GGATCAAACCATAACTCGCGATTTTTTTTTTTTCAGGCTGCTTACAAAGA
GAAAAGATTGCCAGAAAAAGATACATTGATCGTGACGTTGATTGGTTTGG
GTGTTGGGTTGCTCGTGTTGGCCTGTATTTGTGCTCCAAAGTCGACAGGC
GAGGGTAATGAGAAAACTGCTTCAAAACGTCAATCCAAAAAGAAAAATAA
ATAA Coding sequence (CDS) from alignment at sc0000141_pilon:743676..746379- >XLOC_043844 ID=XLOC_043844|Name=XLOC_043844|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1308bp|location=Sequence derived from alignment at sc0000141_pilon:743676..746379- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCAAACAAATCTTGATGTTATTTGTCATCCTCATATTGAGGACAAC
ACAAGGACAACAAGATGGAAATGATGAGAACTATGTGGTTACGTTGAATG
ATAGTGATTTTGAACATAAAACACAAATCTCAACTGGAATGACTACAGGC
GATTGGTTTATTTTGATATGATCAAACAAATCTTGATGTTATTTGTCATC
CTCATATTGAGGACAACACAAGGACAACAAGATGGAAATGATGAGAACTA
TGTGGTTACGTTGAATGATAGTGATTTTGAACATAAAACACAAATCTCAA
CTGGAATGACTACAGGCGATTGGTTTATTTTGATGGCACCAAAGGGAGAT
TGTAAAAAGTGTGCAGGGATAGAAAAAATATTGAAACAACTTTCAACTGA
GGCACCAAAGGGAGATTGTAAAAAGTGTGCAGGGATAGAAAAAATATTGA
AACAACTTTCAACTGAATTTCGAGGCAGAATCAACATTGCTGTTTTAGAC
CGTGACCACTCCAGACATTTCGAGGCAGAATCAACATTGCTGTTTTAGAC
CGTGACCACTCCAGACTGACTCAAAGAAGGTTCAAAATTAAAACACCTGT
TCTTAAATTTGACTCAAAGAAGGTTCAAAATTAAAACACCTGTTCTTAAA
TTCTTTCGAAGTGGTTTTCAATGGGAGTACAAAGGAATGGTAGCTCAATC
CAATATCGCTAATTTTATCACTGGTGGATATCAATCCCAAACTGGATATC
GACCTCCTAAACCTATCGATGCTATCTTTCGAAGTGGTTTTCAATGGGAG
TACAAAGGAATGGTAGCTCAATCCAATATCGCTAATTTTATCACTGGTGG
ATATCAATCCCAAACTGGATATCGACCTCCTAAACCTATCGATGCTATTG
ATGCGTGGCAAGAGGATTTCGTGAAAGAAATGAAGTGATGCGTGGCAAGA
GGATTTCGTGAAAGAAATGAAGGCTGCTTACAAAGAGAAAAGATTGCCAG
AAAAAGATACATTGATCGTGACGTTGATTGGTTTGGGTGTTGGGTTGCTC
GTGTTGGCCTGTATTTGTGCTCCAAAGTCGACAGGCGAGGGTAATGAGAA
AACTGCTTCAAAACGTCAATCCAAAAAGAAAAATAAATAAGCTGCTTACA
AAGAGAAAAGATTGCCAGAAAAAGATACATTGATCGTGACGTTGATTGGT
TTGGGTGTTGGGTTGCTCGTGTTGGCCTGTATTTGTGCTCCAAAGTCGAC
AGGCGAGGGTAATGAGAAAACTGCTTCAAAACGTCAATCCAAAAAGAAAA
ATAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000141_pilon | genome | sc0000141_pilon:743676..746379 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 487-654:169 |
| Aaloc | 451-486:843 |
| Aaloc | 328-447:1299 |
| Aaloc | 286-324:1492 |
| Aaloc | 235-282:1845 |
| Aaloc | 169-231:2052 |
| Aaloc | 1-165:2705 |
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