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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000141_pilon:565441..569595- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043839 ID=XLOC_043839|Name=XLOC_043839|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4155bp|location=Sequence derived from alignment at sc0000141_pilon:565441..569595- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGAGAAACGCCGACGTGCAAGGGTCCAAGGGGGGTGGGCTTCAAC
CTCCAAGCCACGAAGAGATGAGGGACCAACAAAGATTGCCAACAAAGATG
AAAAATATCCTATTAATTTCAAATTTAAACCAACTGTAGAGGTAAAGATA
TAATTTTTTGGTTTTTCTTATTTTGATTATCTTTTTGGTGTGTACTGTTT
TTGAAAATGAACTTTTTGATTTCTATAAAATTGACAAAAAGTGAATAAAA
GTTTTTAAAAAATATCAACAAGTAAAAGAAACAATGACATGTTCTATCTT
TGCAAGTTTGCAATAGAATGAAAAACCTTCAAAATATATTATATTTGTCT
TCAGAACAGAAGTAAGCCTAAAGAGCTGGTCATAAAGTAAGTTTTCGCTT
ATTATTACCTCTCCATCAAATTGTTATGAATAGAATTATACGGGTCAAGC
AATTATCTTAAATTTTGACCTAATATTGTTTGGAAACTTTTAGTAGTTGT
GACTTTGTCTTTCAAGGATATATATAACTTGTTTTTTATATGCCATACAA
AGCAACCCAGACTGCATCATTTGAAAATTCCAGGTGTGTGGTTAATCACA
CCCTAGAATGTTAATTTTAGTAATTTAGGCGTGTGATAAGTGAGTGCTAT
AAACAACTTTTAGTTGTGAAACTAACTTTATGTTGTGTGATTGATGGCAT
GCTCCTTAGACATTTTAGGTGTTTATGGGGGTGTGCGCGTGCTATGGCAC
GCCTCAAATGATGTAGCCTGGCAAGCCTGTCATACTGATTGATGCAAATG
TTGCCATTGTTTATTTTTCATTTTTAGGAAGAATGGGGTTCATCAACTGA
GTGATACTGACAATGGACTATCCAGGTCAGAGTGCTAGATAATATTTTAT
TATGCTATGCTATTTTAGCTTAATTGAGTTTTGATTCCTGAAAACCTAAT
ACTCTGAAGATTCATTTATTTGACAATTTTCTGACAATTCCTTCAGTGGA
TTAATTTTCGCGCTTTTCGCAAATTTTGGTCATTTTCGCAAAATTTAATC
CAGGGCAAAATTTTTAAAATCCTTGATACGCAAAAATTAATCCTGGTTCT
CATGATAATTAATCCACTTAAGGTGGTTAGAGTTTAAATTAAAAGTAATA
CTCATTTAGAATATTTCCATTGTTCTCTTTTTGGACCTACCTTAAGGTAG
TCCTTTAAATTAACCCTTGTCCGTTCGTCCGTTCGTCCGTCCGTTCGTTC
GTCTGTTGCCAGCTTTTCTCGGGATCGGCTCATTAGTTTTTTCTAATTTT
TTGCACAATGATGTAAAATGGCAATACCCAAAATGTGACGGAGCCCGATT
TTCGAAAAAAAATTTTTTCCGGTCGCCAGGTCCGGAAATGTCCCGGAAAA
AGCAGTTTTTTGGGATTTTCTCGAGATTTCATCATTAGTTTTTTCTGATT
TTTTGCTCAAAGATGCGTATTAACAATGCCCAAAACATGGCCTAGTCCAA
TTCTTGAGAAAAAATTTTTTCCGGCTGAAAATGCCGGAAATATGCCGGAA
ATCGCCGTTTTTCTGGATTTTCATTGGATTTTTTCCATATAATTGGTTTT
TTTTTTCATTCAAAAACATTATTAATAGCAATGCCCACCATTAAGTATGT
TTCAATTTTCAATAAAATTGATTTTTGAAGCCGGAACTTTCTAAAAATCG
CCGGAACAGCCGATTTTCGCCGGAAAAACGGTTTTTCTTGAATTTCTTGA
GCTGTACTTTATATTTTTTCATTTTTTCAATTTTGCACACTGATGCAAAA
TGTCAATACCTAAATTGTGATAGAGCCCGATTTTCGAAAAAAAATTCAAT
TCCTGCCGAAAATGCCGGAAATATGCCGGAAAAACTGGTTTTTTGGCATT
TTCTCAAGATTTTATCATTAGTTTTTTCTGATTTTTTGCTCAAAGAATCG
TATTAACAATGCCCAAAACTTGACCTAGTCCGACTCTTGAGAAAAAATTT
TTCCGGTTTAGTTTACTTATATTTCTATGCTTTTCACACAAAAACATTAT
TCATAACAATGCTCATTATCAAGCATGATTCAATTGTCAATAAAACTGAT
TTTTGCGACCAGAACTTCCTATTTATTATTTCCCTACAACCCTTCCCTCT
CCCCCCCATCAACAATCAATGATGAATTTATTGTGTTGTGTATTTTCGCT
AAACGCTATATTTTCTGACTGATTTTTTTCATTTTTCTTTTCGCATTGCT
ATCTAACTTTAATCATCAGGTAGGTCCATTCAGCATATTGCTTGTTATGT
TACAGGATATTTCTCCAAAATGAATTTTTCGATAGCAATGAATGTGAATG
GATTTTTGAACAGTTGCATGCTGAGGTGCCTTGGAAGCAAGAACTCATTA
AAATTAAAGGTTTCATTACTATATAATATAGAAGCTCTAAATTCCCTCAC
ACCAAAAATGCTTTTGAAAGAGGATTTCAGAGAAATATTCGACCAACTAG
AAATTAAAATATATTTTTCCCAATGCATTGAGATCAGCGTAGATAAATCT
CGTGATCCAAGCCACAATAGACTTCCCTTTTAAAACTAAACCCAAATTTT
GAAGTTTAGGAATGGAAGACGTGTAGTAACTAATGCTTGCTATTATACTT
AAGCGTTTATAATGTTATTATTTTAGGTGAAACAGTAGAACAACCAAGAC
ATACAGCATGGTTTGGAGATATTACATACACATACTCAGGACTTACACTA
AATCCACATCAGGTTTGAATGACCTATTCACATACAGTAATCCAGAAAAA
TGGACATAGTTGAAACTCAGACTGTTAACTTTCTTGAAGTTCATTTTGAT
CCGTATAATAATTGTTACTGGGCTGAAATGAAAATCATTTGTTTTCTGGT
TAACTAGCTGTTGTAAATTCAGATGCAGATGACCCCTAATTGAAACTTAG
AATTCTTTTTTGTTCGGTGTAGGTATTTTAATCTTAAATTCAATTTAGTT
TGCTTTTCTATATACTTTTAGTTTTCACCACTGTTGATCATGATCAGAGA
CAAGATTGAATCATATATGAATGAGCAGCAGATCAATCGCGTGCCATTCA
ACTCAATGCTGGCAAATTTGTATCGTGGCGAGAAAGACAGTATCGTAAAT
ACATCATTTCTTGCTTTTTTCTATACTTTAAACTCAACAAAAAATTACGA
ATCAAATTTCATCTTTAACCCATTAAATGCCATTGAATAACTTCAAATTT
TCTTATATTTTTTTTTGATTTCAAACGCCTGTACACACCCCAACTAAAAA
TAAAATACCAATCTGGACTTTTATTGGACGTTTTTTATTTAGGTGGGGTT
AAAAAACCTAGTACAGGACTGAATAAATTGAGCGATCTCGTATAATACCA
TTGGCACTTTTAATGGGTTAAGATCATTATTTCCAACACCATAACTGCAC
AAAACGAGGACCACTTAGTTCTATTCACTTGGATGTCTAAAGATGTGAAC
TGATTCCCTTTCCATATCTCTTCAGGACTGGCATTCAGACGATGAAGTAT
CTTTACAAAGAAATCCTGTCATTGCTTCTTTATCATTTGGTGAAACAAGA
AATTTTGAACTGCGGCGGAAAGACCAAAGTGAAGTAAAAGTTTTAATATT
TTAATTGTTTTTTTCAACTATAAAGTAGCATTATCTGTATTATTTTCCAA
ATAAAAATGGTTTGGTTGTATTTTTTGCTTATTTTTAGAGGGAATTTTGT
ACTCTTTTATATATATGCTAACAATTAAAACATTTACCAAACTTTTACAT
GCAGATTATTGATGGTGAAGTTGATTACACTTATTCGCAACACGTTAAAG
TACCTCTATCCAATGGTAGTTTGCTAATCATGGATGGAGCTTGTCAAGAA
GACTGGCAGGTACATAGTCTAAGAATTTCTCTAAACAAAAAGGAGAAACT
CTTGCAAAAATTTCCAATTATTTCTAATTTTTGTCAAAATTAAGTGGAGT
TGTAGGGTGAACCTTCTCTGGACCTGCAAGTTTGTTCAACATCATTATGT
TAAATTGTTTTATCTTTCATATCATTCTAGCATCGTGTTCCAAAAGAATA
CCATGATCGACAGCCAAGGATCAATTTGACATTTAGAACAATTTATCCAA
GCTAA Coding sequence (CDS) from alignment at sc0000141_pilon:565441..569595- >XLOC_043839 ID=XLOC_043839|Name=XLOC_043839|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1644bp|location=Sequence derived from alignment at sc0000141_pilon:565441..569595- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGAGAAACGCCGACGTGCAAGGGTCCAAGGGGGGTGGGCTTCAAC
CTCCAAGCCACGAAGAGATGAGGGACCAACAAAGATTGCCAACAAAGATG
AAAAATATCCTATTAATTTCAAATTTAAACCAACTGTAGAGATGAGTGAG
AAACGCCGACGTGCAAGGGTCCAAGGGGGGTGGGCTTCAACCTCCAAGCC
ACGAAGAGATGAGGGACCAACAAAGATTGCCAACAAAGATGAAAAATATC
CTATTAATTTCAAATTTAAACCAACTGTAGAGAACAGAAGTAAGCCTAAA
GAGCTGGTCATAAAAACAGAAGTAAGCCTAAAGAGCTGGTCATAAAGAAG
AATGGGGTTCATCAACTGAGTGATACTGACAATGGACTATCCAGGAAGAA
TGGGGTTCATCAACTGAGTGATACTGACAATGGACTATCCAGGATATTTC
TCCAAAATGAATTTTTCGATAGCAATGAATGTGAATGGATTTTTGAACAG
TTGCATGCTGAGGTGCCTTGGAAGCAAGAACTCATTAAAATTAAAGGATA
TTTCTCCAAAATGAATTTTTCGATAGCAATGAATGTGAATGGATTTTTGA
ACAGTTGCATGCTGAGGTGCCTTGGAAGCAAGAACTCATTAAAATTAAAG
GTGAAACAGTAGAACAACCAAGACATACAGCATGGTTTGGAGATATTACA
TACACATACTCAGGACTTACACTAAATCCACATCAGGTGAAACAGTAGAA
CAACCAAGACATACAGCATGGTTTGGAGATATTACATACACATACTCAGG
ACTTACACTAAATCCACATCAGTTTTCACCACTGTTGATCATGATCAGAG
ACAAGATTGAATCATATATGAATGAGCAGCAGATCAATCGCGTGCCATTC
AACTCAATGCTGGCAAATTTGTATCGTGGCGAGAAAGACAGTATCTTTTC
ACCACTGTTGATCATGATCAGAGACAAGATTGAATCATATATGAATGAGC
AGCAGATCAATCGCGTGCCATTCAACTCAATGCTGGCAAATTTGTATCGT
GGCGAGAAAGACAGTATCGACTGGCATTCAGACGATGAAGTATCTTTACA
AAGAAATCCTGTCATTGCTTCTTTATCATTTGGTGAAACAAGAAATTTTG
AACTGCGGCGGAAAGACCAAAGTGAAGACTGGCATTCAGACGATGAAGTA
TCTTTACAAAGAAATCCTGTCATTGCTTCTTTATCATTTGGTGAAACAAG
AAATTTTGAACTGCGGCGGAAAGACCAAAGTGAAATTATTGATGGTGAAG
TTGATTACACTTATTCGCAACACGTTAAAGTACCTCTATCCAATGGTAGT
TTGCTAATCATGGATGGAGCTTGTCAAGAAGACTGGCAGATTATTGATGG
TGAAGTTGATTACACTTATTCGCAACACGTTAAAGTACCTCTATCCAATG
GTAGTTTGCTAATCATGGATGGAGCTTGTCAAGAAGACTGGCAGCATCGT
GTTCCAAAAGAATACCATGATCGACAGCCAAGGATCAATTTGACATTTAG
AACAATTTATCCAAGCTAACATCGTGTTCCAAAAGAATACCATGATCGAC
AGCCAAGGATCAATTTGACATTTAGAACAATTTATCCAAGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000141_pilon | genome | sc0000141_pilon:565441..569595 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 748-822:76 |
| Aaloc | 643-747:352 |
| Aaloc | 535-642:631 |
| Aaloc | 412-534:1135 |
| Aaloc | 328-411:1478 |
| Aaloc | 223-324:1850 |
| Aaloc | 175-219:3328 |
| Aaloc | 142-171:3802 |
| Aaloc | 1-141:4156 |
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