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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000008_pilon:2794307..2797093+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043836 ID=XLOC_043836|Name=XLOC_043836|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2787bp|location=Sequence derived from alignment at sc0000008_pilon:2794307..2797093+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCGCGGTATTACCGATAAGAAAGTATGTCTCATCGGGGCGGGCCC
ATGCGGTATCACCCTTCTCTCCGCCTTCAGTGACGCCAAATCACGTGGTG
AAGCTATTCCACAAGTAGTATGTTTCGAAAAACAAGAACAAATCAGTGGT
TTATGGAACTACACATGGCGTACTGGCCTCACAGCCCATGGTGATGCTTT
ACCAAACAGTATGTACCGCCATCTCTGGTCAAACGGACCTAAAGAATGCT
TAGAATTTCCAGACTACACTTTCATGGATCATTTCAAGAAACCAATCCCT
TCCTTCCCTCCAAGAGCTGTCCTTCAAGACTACATTCTCGGAAAAGCCAA
CAAATACAACGTCGGACAATTCGTCAAAACAAGTCACGCCGTACGTCACG
TCGAAGAAAAAGGTACACAATTCTTGGTCACTTATGAAGATTTAGTCAAC
CACCAAACCTATAACGAAGTTTTTGATTATGTTGTATGCGCCACCGGTCA
TTACACTGTGCCACACTTCCCACAATATCCCGGATTAGACAAATTTGACG
GCCGTGTCATGCACGCTCATGATTTCCGAAGCGCAgaagaatttaaaaac
aaaaccattgTCTTGATTGGATCCAGTTACTCTGCTGAAGACATCTCCTT
GCAATTGTACAAATATGGTGCTAAGAAATGCATCATTTCATACCGTAAGA
ATCCTATGGGATACAAATGGCCTGCTGCTATTGTTGAGAAACCAGCCCTT
ATCAAGGTAAAGGAATTTTCTAAGTTGACCTTCTCTTCCATATAATCTTA
CTTAGACCAAAAGAATTTGTTATATCATGTTGCCTATGTATCTGACACGA
CTTTATTGTCTTGTATCAGCTCCGACCTAAAAGAAATGCCTTAAATTACG
CTTAGATTTTATGGCTATGCATTGTAGGTTAGTTTTACTTCTAAGCAGAC
AAAGCTCTATaacaacaaaatgttttgaatcCTTTGGACAAATACGATAA
AGCTGTTCAAAAATAATGATGCTTTAGCTATAGATTAAAAAGTAGCTATA
GAAATTCATAATCATTAACATCTTCCTCTTTCTTCAAATATTGTAGGTTG
AAGGAAGCAACAAATTCCATTTCACTGATGGTACAATTGAAgaagttgat
gacgtcatcttttgTACCGGCTACCAGCATTATTTCCCATTCATGTCACA
GAATTTGCGTTTATTCGCCACCAACATCATGTATCCTGACCATCTATACA
AGGGAATCATGTGGCATCGTAATCCTAATTGTTTGTACATGGGAATGTCT
GATCAATATTACACCTACACCATGTTCGACACACAAGGTTAGCGGAAGTT
TCGACCCCAGCtgccacacaacgttgtttcaacgtttatctaatgttcat
aacgtccatttaacgttagatgaacgttgaaacaatgttgtgtgtcagct
gggacgGTTACCAATACCATTAagagttcttccgtctcagacggattttc
gtctcaGTGAAAGTATATAAAGAGGATTTTCCTTCTCCAAATCTCtacat
aattcaccaaaatttcaaaaatatgtgCTCATTTCCtttgtaaaatccat
tttccgccTCTGACGTGAAAACCTTGCTTTGGACAGTGGTGTCTTATGTA
GATAACGAAAGCTATCACGTAGCGTCAGCTCGTCTTGACTGACAGCTTGA
AATTAACTATACTATTGTTTTAAGGAGAATTGAGACTGACATCCCGACTT
CTTCAAATATTTGCTTgataaaaaatctacaaaatcaatCCCAATGCATC
CAAATTATATCCACCTGTAAGCCGCTATCAGTTTGCGATTTGATTAATTA
GCAAATCTAATAATCCCACATAATTCATATTTATCTTACtttttttCCTA
AAGGATTATGGATCCGCGATTACGTCATGGGTAAGATCAATATCGGAGAC
GTTGGCAAACGTTCAGAACACATGAAACAATGGTACGATCGTGGCCAAGC
ACTCAAGAATGCTGTCGAAGAAATCGAATTCCAACGTGATTATGTACATG
ATCTTGTCGCAGTAAGTCTTCCATAACTTTCTCATTGAAAAATAACTAGT
TACTTGttactagtttgagtaaagaaaacgatttaagttaatttcatact
gtcaaagtttcatgccatccaggatggcaatcttcagtgaaatcttAGTT
ACTTGTTCCTCCATGTATGTATGTAAACGAGTTGAAGTAagaggaaagaa
aaatcatGTGAGTAGGTAGTTGGTTAGTATTTTCCTAGCCATACACTTAG
AAACccttaaaatacaatttctcatcataaagaacttttaaacCTGGCTC
TTaaaccatgttcgcacgtgacggttccgtttcgctccgaaacgaaatga
agccattctattggttacattcaagtgttacgtcaattctaaccaataga
atggcttcactccgtttcggagcgaaacgaaaCCGTCACGTGAGAACATG
GTCTTAACATTTGGAACGATTCCTTCTATTTTTCTTAATTATCGTCTTTT
TCGTCTCTCCAGGACATGCCAAACTACCCAAAGAAACATGACATCAATAT
CATTGCTGAACATTTGAAAGTATGGAAAGTGCACAAGAGTGAAGATATCT
TGACGTACCGAGATCACTCTTTCACCTCACCCAATGATGGTCATTTAGCC
TGCAAACACGTTCTTCCATGGATCAAGTCCTTTGATGATTCACTTGAAGG
GTATGTCAACCAAACCGAAAAATCACAACCTGCATAA Coding sequence (CDS) from alignment at sc0000008_pilon:2794307..2797093+ >XLOC_043836 ID=XLOC_043836|Name=XLOC_043836|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2760bp|location=Sequence derived from alignment at sc0000008_pilon:2794307..2797093+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCGCGGTATTACCGATAAGAAAGTATGTCTCATCGGGGCGGGCCC
ATGCGGTATCACCCTTCTCTCCGCCTTCAGTGACGCCAAATCACGTGGTG
AAGCTATTCCACAAGTAGTATGTTTCGAAAAACAAGAACAAATCAGTGGT
TTATGGAACTACACATGGCGTACTGGCCTCACAGCCCATGGTGATGCTTT
ACCAAACAGTATGTACCGCCATCTCTGGTCAAACGGACCTAAAGAATGCT
TAGAATTTCCAGACTACACTTTCATGGATCATTTCAAGAAACCAATCCCT
TCCTTCCCTCCAAGAGCTGTCCTTCAAGACTACATTCTCGGAAAAGCCAA
CAAATACAACGTCGGACAATTCGTCAAAACAAGTCACGCCGTACGTCACG
TCGAAGAAAAAGGTACACAATTCTTGGTCACTTATGAAGATTTAGTCAAC
CACCAAACCTATAACGAAGTTTTTGATTATGTTGTATGCGCCACCGGTCA
TTACACTGTGCCACACTTCCCACAATATCCCGGATTAGACAAATTTGACG
GCCGTGTCATGCACGCTCATGATTTCCGAAGCGCAgaagaatttaaaaac
aaaaccattgTCTTGATTGGATCCAGTTACTCTGCTGAAGACATCTCCTT
GCAATTGTACAAATATGGTGCTAAGAAATGCATCATTTCATACCGTAAGA
ATCCTATGGGATACAAATGGCCTGCTGCTATTGTTGAGAAACCAGCCCTT
ATCAAGATGTCTCGCGGTATTACCGATAAGAAAGTATGTCTCATCGGGGC
GGGCCCATGCGGTATCACCCTTCTCTCCGCCTTCAGTGACGCCAAATCAC
GTGGTGAAGCTATTCCACAAGTAGTATGTTTCGAAAAACAAGAACAAATC
AGTGGTTTATGGAACTACACATGGCGTACTGGCCTCACAGCCCATGGTGA
TGCTTTACCAAACAGTATGTACCGCCATCTCTGGTCAAACGGACCTAAAG
AATGCTTAGAATTTCCAGACTACACTTTCATGGATCATTTCAAGAAACCA
ATCCCTTCCTTCCCTCCAAGAGCTGTCCTTCAAGACTACATTCTCGGAAA
AGCCAACAAATACAACGTCGGACAATTCGTCAAAACAAGTCACGCCGTAC
GTCACGTCGAAGAAAAAGGTACACAATTCTTGGTCACTTATGAAGATTTA
GTCAACCACCAAACCTATAACGAAGTTTTTGATTATGTTGTATGCGCCAC
CGGTCATTACACTGTGCCACACTTCCCACAATATCCCGGATTAGACAAAT
TTGACGGCCGTGTCATGCACGCTCATGATTTCCGAAGCGCAgaagaattt
aaaaacaaaaccattgTCTTGATTGGATCCAGTTACTCTGCTGAAGACAT
CTCCTTGCAATTGTACAAATATGGTGCTAAGAAATGCATCATTTCATACC
GTAAGAATCCTATGGGATACAAATGGCCTGCTGCTATTGTTGAGAAACCA
GCCCTTATCAAGGTTGAAGGAAGCAACAAATTCCATTTCACTGATGGTAC
AATTGAAgaagttgatgacgtcatcttttgTACCGGCTACCAGCATTATT
TCCCATTCATGTCACAGAATTTGCGTTTATTCGCCACCAACATCATGTAT
CCTGACCATCTATACAAGGGAATCATGTGGCATCGTAATCCTAATTGTTT
GTACATGGGAATGTCTGATCAATATTACACCTACACCATGTTCGACACAC
AAGGTTGAAGGAAGCAACAAATTCCATTTCACTGATGGTACAATTGAAga
agttgatgacgtcatcttttgTACCGGCTACCAGCATTATTTCCCATTCA
TGTCACAGAATTTGCGTTTATTCGCCACCAACATCATGTATCCTGACCAT
CTATACAAGGGAATCATGTGGCATCGTAATCCTAATTGTTTGTACATGGG
AATGTCTGATCAATATTACACCTACACCATGTTCGACACACAAGGATTAT
GGATCCGCGATTACGTCATGGGTAAGATCAATATCGGAGACGTTGGCAAA
CGTTCAGAACACATGAAACAATGGTACGATCGTGGCCAAGCACTCAAGAA
TGCTGTCGAAGAAATCGAATTCCAACGTGATTATGTACATGATCTTGTCG
CAGATTATGGATCCGCGATTACGTCATGGGTAAGATCAATATCGGAGACG
TTGGCAAACGTTCAGAACACATGAAACAATGGTACGATCGTGGCCAAGCA
CTCAAGAATGCTGTCGAAGAAATCGAATTCCAACGTGATTATGTACATGA
TCTTGTCGCAGACATGCCAAACTACCCAAAGAAACATGACATCAATATCA
TTGCTGAACATTTGAAAGTATGGAAAGTGCACAAGAGTGAAGATATCTTG
ACGTACCGAGATCACTCTTTCACCTCACCCAATGATGGTCATTTAGCCTG
CAAACACGTTCTTCCATGGATCAAGTCCTTTGATGATTCACTTGAAGGGT
ATGTCAACCAAACCGAAAAATCACAACCTGCATAAGACATGCCAAACTAC
CCAAAGAAACATGACATCAATATCATTGCTGAACATTTGAAAGTATGGAA
AGTGCACAAGAGTGAAGATATCTTGACGTACCGAGATCACTCTTTCACCT
CACCCAATGATGGTCATTTAGCCTGCAAACACGTTCTTCCATGGATCAAG
TCCTTTGATGATTCACTTGAAGGGTATGTCAACCAAACCGAAAAATCACA
ACCTGCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000008_pilon | genome | sc0000008_pilon:2794307..2797093 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1156-1380:2563 |
| Aaloc | 1000-1155:1906 |
| Aaloc | 757-996:1097 |
| Aaloc | 1-756:1 |
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