|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000120_pilon:282915..283964+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043825 ID=XLOC_043825|Name=XLOC_043825|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1050bp|location=Sequence derived from alignment at sc0000120_pilon:282915..283964+ (Clytia hemisphaerica_ch_hm2_pilon)
atgcaaaatgaAGGCTACGATTCCAGCCAAAAATATTCAGATATAACTGA
GGACAATTTAGATACAGAAATAGTTCAAATTAAGCAAAGTCATCCTTTAG
CAGGTGAAAGAATGGTTTGTGGTATTTTGAGAGCTAAGGGATATCATCTT
CAAAGAAGAAAGGTTCGAGAAAGTATACATCGAGTTGATCCTATCAACAC
TATAAAAAGATGGCTtcaaaaaaatccaagatgggTTTACAGTGTGCCCG
GCCCTAACAGCCTTTGGCACAACGATGGCTTGCACAAGCTGATAAAGTTT
GGTTTTGTCATTCACGCATGTATAGATGGCTTCTCCAGAATGGTAACATC
ATTACATTGTGCCACAAATAACTATGCCAGCACTGCACTTCAAGGCTTTT
TGACAGGTGTTTCGAAATTCGGCATACCTGCTCGTGTTAGAGGAGATAGA
GGGGGCGAAAATGTCCGAATCCTTGAATACATGAGGCAAAAGCAAGGCTA
TGAAGGTGCTTACATTCAAGGTACCTCGGTACACAACCAGAGAATCGAAA
GGCTACACTATGACACCACACACTGTGTCTTAGCACACTTCATTGATCTA
TTCAAGTATATGGAAGAGAATGGTTTGTTACAACGAGATCGTTTTGCTTt
gcattttgtcttccttccaAGAATTCAAAATTCTCTCAATCAGTTTCAAG
AAGGTTGGAATCATCATAAATTGTCAACAGAGCACAATAAAACCCCCTAT
CAGCTTTGGCTTTTGGGGATGATGGATGAGGATAAACAATCACAAAGAGG
TGTAAGGAGATTCTATAACGATACAAATGATGATCTATTCGGTGTGGATA
TGTCTTCCAATTTAAGTTTTATGCCAGACGATTTGTCAACAGTTGAGCTT
CACAATGTCACCATCAATAATGAATCATTCATTCTGAACACTCTCAAGAC
AGAATTCAATCCCACGGATCATGACGGAAACTatggaatagcttgttttt
ctGCTGTCAAAGAAAGAATCTCTGAACTGTTAGAATCTTTTGATCATTGA
Coding sequence (CDS) from alignment at sc0000120_pilon:282915..283964+ >XLOC_043825 ID=XLOC_043825|Name=XLOC_043825|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2100bp|location=Sequence derived from alignment at sc0000120_pilon:282915..283964+ (Clytia hemisphaerica_ch_hm2_pilon)
atgcaaaatgaAGGCTACGATTCCAGCCAAAAATATTCAGATATAACTGA
GGACAATTTAGATACAGAAATAGTTCAAATTAAGCAAAGTCATCCTTTAG
CAGGTGAAAGAATGGTTTGTGGTATTTTGAGAGCTAAGGGATATCATCTT
CAAAGAAGAAAGGTTCGAGAAAGTATACATCGAGTTGATCCTATCAACAC
TATAAAAAGATGGCTtcaaaaaaatccaagatgggTTTACAGTGTGCCCG
GCCCTAACAGCCTTTGGCACAACGATGGCTTGCACAAGCTGATAAAGTTT
GGTTTTGTCATTCACGCATGTATAGATGGCTTCTCCAGAATGGTAACATC
ATTACATTGTGCCACAAATAACTATGCCAGCACTGCACTTCAAGGCTTTT
TGACAGGTGTTTCGAAATTCGGCATACCTGCTCGTGTTAGAGGAGATAGA
GGGGGCGAAAATGTCCGAATCCTTGAATACATGAGGCAAAAGCAAGGCTA
TGAAGGTGCTTACATTCAAGGTACCTCGGTACACAACCAGAGAATCGAAA
GGCTACACTATGACACCACACACTGTGTCTTAGCACACTTCATTGATCTA
TTCAAGTATATGGAAGAGAATGGTTTGTTACAACGAGATCGTTTTGCTTt
gcattttgtcttccttccaAGAATTCAAAATTCTCTCAATCAGTTTCAAG
AAGGTTGGAATCATCATAAATTGTCAACAGAGCACAATAAAACCCCCTAT
CAGCTTTGGCTTTTGGGGATGATGGATGAGGATAAACAATCACAAAGAGG
TGTAAGGAGATTCTATAACGATACAAATGATGATCTATTCGGTGTGGATA
TGTCTTCCAATTTAAGTTTTATGCCAGACGATTTGTCAACAGTTGAGCTT
CACAATGTCACCATCAATAATGAATCATTCATTCTGAACACTCTCAAGAC
AGAATTCAATCCCACGGATCATGACGGAAACTatggaatagcttgttttt
ctGCTGTCAAAGAAAGAATCTCTGAACTGTTAGAATCTTTTGATCATTGA
atgcaaaatgaAGGCTACGATTCCAGCCAAAAATATTCAGATATAACTGA
GGACAATTTAGATACAGAAATAGTTCAAATTAAGCAAAGTCATCCTTTAG
CAGGTGAAAGAATGGTTTGTGGTATTTTGAGAGCTAAGGGATATCATCTT
CAAAGAAGAAAGGTTCGAGAAAGTATACATCGAGTTGATCCTATCAACAC
TATAAAAAGATGGCTtcaaaaaaatccaagatgggTTTACAGTGTGCCCG
GCCCTAACAGCCTTTGGCACAACGATGGCTTGCACAAGCTGATAAAGTTT
GGTTTTGTCATTCACGCATGTATAGATGGCTTCTCCAGAATGGTAACATC
ATTACATTGTGCCACAAATAACTATGCCAGCACTGCACTTCAAGGCTTTT
TGACAGGTGTTTCGAAATTCGGCATACCTGCTCGTGTTAGAGGAGATAGA
GGGGGCGAAAATGTCCGAATCCTTGAATACATGAGGCAAAAGCAAGGCTA
TGAAGGTGCTTACATTCAAGGTACCTCGGTACACAACCAGAGAATCGAAA
GGCTACACTATGACACCACACACTGTGTCTTAGCACACTTCATTGATCTA
TTCAAGTATATGGAAGAGAATGGTTTGTTACAACGAGATCGTTTTGCTTt
gcattttgtcttccttccaAGAATTCAAAATTCTCTCAATCAGTTTCAAG
AAGGTTGGAATCATCATAAATTGTCAACAGAGCACAATAAAACCCCCTAT
CAGCTTTGGCTTTTGGGGATGATGGATGAGGATAAACAATCACAAAGAGG
TGTAAGGAGATTCTATAACGATACAAATGATGATCTATTCGGTGTGGATA
TGTCTTCCAATTTAAGTTTTATGCCAGACGATTTGTCAACAGTTGAGCTT
CACAATGTCACCATCAATAATGAATCATTCATTCTGAACACTCTCAAGAC
AGAATTCAATCCCACGGATCATGACGGAAACTatggaatagcttgttttt
ctGCTGTCAAAGAAAGAATCTCTGAACTGTTAGAATCTTTTGATCATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000120_pilon | genome | sc0000120_pilon:282915..283964 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 649-1062:637 |
| Aaloc | 1-636:1 |
|
