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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000093_pilon:6839..11871- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043778 ID=XLOC_043778|Name=XLOC_043778|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5033bp|location=Sequence derived from alignment at sc0000093_pilon:6839..11871- (Clytia hemisphaerica_ch_hm2_pilon)
GATAAAAATATGAATCGGACGAATCGCATGTTGTCGCTCTTTTATGCTGT
CTTGAGTAAAGTGGACCAACAATTAGAACAATTTTTACTGTGGTAAGTTC
AAAATTTCTTTATATATTTTCCTGTTCTTTGTACTATATAGTTTTTCACT
TTGAATTGGGTTTTTATAAATATTTTAGCTGCAGTCCAATATTGTTAGAT
ACACCGTTTCTTCTTGTAAGAATGGCCCAAAAACAATGAGGCTATAAAGC
TCCAAAAATAAGAACACTTTAAGAACAAGGCTGGCCATAAAATGACTGAA
TATTATCGAATCTAATAACATGACGGGAGAAGAATCTCTCGAAACGTAGC
CAAACGTAAATCTCGTGATCCAAGCCACGATAAACCTCCAATATACTAAT
AACATAGATACACGCTTTTTGGACCTACCCCGGTGGGGTGAAGGTCCTAT
AAATTAACCCGTGTTCGTTAGTTCGTTCGTTAGTTACCAACTTTTCTCGA
GATTGGCTCATTCAATTTTTCTGATTTTTTGCACAAAGGTGCATTACTAT
AAACCCTCGAATGTGACGGAGCCCGATTTTCGAAAAAAAAATTTTTCCGG
CCGGTAGAACCGGAAATGTCCCGAAAAAAGCGGTTTTTTGAGATTTTCGC
GAGATTTTATCATTAGTTTTTTGCGATTTTTTGCACATAGATGCACATTA
GTACTGCCGAAAAGTTGTCGAAAACCGTTTGCCGAAAAAAAATTTTTTCC
GGTCTGTAGAACCGGAAATGTGCCGGAAATCGTCGTTTTTTCACATTTCC
GTCACATTTTTTTCAACTCATTTAATTGTTTCTTTACAGAAAAATGTTCT
TTATGATGATGCCCAAAACTTAGCATCGTTTGATTTCCAAAAAAATCATC
CTTTGAATCCGGAACTCCTTAAAAATCGCCGGAACAGCCGAAAACCGGCG
TAAAACGGTTTTCCTTCATTTTTTCAACTTATACTCGACAGATTTTCATG
ATTTTTTGCACAATGATGTAAAATGGCAATGCCCAAAATGTGACAGAGCC
CAATTTTCGAAAAAAAAATTTTCCGGCCGGTAGAACCGGAAATGTCCCGA
AAAAAGCGGTTTTTTGAGATTTTCTCGAGATTTTATCATTAGTTTTTTGC
GATTTTTTGCACATAGATGCACATTAGTACTGCCGAAAAGGTGTCGAAAA
CCGTTTGCAGAAAAAAAAAATTTTCCGGTCTGTAGAACCGGAAATGTGCC
GGAAATCGTCGTTTTTCACATTTCCGTCACATTTTTTCAACTTATTTAAT
TGTTTCTTTACAGAAAAATGTTCTTTATGATGATGCCCAAAACTTGGCAT
CGTTTGATTTCCAAAAAAATCATCCTTTGAATCCGGAACTCCTTAAAAAT
CGCCGGAACAGCCGAAAACCGGCGTAAAACGGTTTTCCTTCATTTTTTCA
ACTTATACTCGACAGATTTTCATGATTTTTTGCACAATGATGTAAAATGG
CAATGCTCAAAATGTGACAGAGCCCAATTTTCGAAAAAAAATTTTTCCGG
CCGCTAGAACCGGAAATGTCCCGAAAAAAGCGGTTTTTTGAGATTTTCTC
GAAATTTTCTCATTAGTTTTTTGCGATTTTTTGCACATAGATGCACATTA
GTACTGCCGAAAAAGGTGTTTCTTAATTGCTTTCTCCGTTCCAATAGATA
TATAATTCGAAATTTAAAATTATACATTACTTCCATTAAATTCTAATTAT
TCGTTTTATAAATAGGTAGGTCCATTAAAGTATTGCTTGTTTAATAACAA
TTCTATTAGAACACGAGGTTGAAAATTGGTTAAAACCTAAGAACAAATTG
AGAACAATGAACCTCAGATTTCAAAAGATTATTATTATTAAGAAAGTATT
GATTTTAACAGATTTTAAACTCATTTTAAGTTTTAAGTAAAGAAACTAAA
GCGTATTAAGAACATTTAAGCCTGAAAATTCCAAAAATCAAGAACAGCCC
AGCCTGGCCAAACGTTTATTCATTTCAGCCCCTGTTTATTTGAAACCTAA
GAGTAAGAACAATCCAAGCCCCGGATTTCAGATTAACAGATTTTAAACTC
ATTTTTGGACCTACCTCCGGGTGCCCCGGTGGAGGTTCTATAAATTAACC
CATGTCCGTTCGTCTGTTCGTCTGTTCGTCCGTCCGTCCGTCTGTTACCA
ACTTTTCTCAGGATTGGCTCATTAGTTTTTTCTGATTTTTTGCACAATGA
TGCAAAATGGCAATGCCCAGAACGTGACGGAGCCCGATTTTTGAGAAAAA
ATTTATTTGGGCAAATTTGGGCCAAAAACTACCTAAAAATAGGGTTTTTT
GGACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGATTTTTTGTACAAA
GATGGAGGGCAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCCGGAA
AATTCTTATTCGCCTTAAAAAACGGATTTTCGTATTTTGGGGGAAATTCC
CTTTAACCAAATAAGAAAATATAGCTTTTCTCAATGTTGACTTGTTATTT
TTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCTAAAATGTGT
CGGAGCCCGATTTTCGAAAAAAAATATATTTGGGCAAATTTGGGCCAAAA
ACTGCCTAAAAATAGGGTTTTTTGGACTTTGTGCAAAATTCTGTCATTAC
TTTTTTCTGATTTTTTGTACAAAGATGGAGGGCAAGATTCTCTAAAGAAT
GGCTGAAGTGGTTTTTCCCGGAAAATTCTTATTCGCCTTAAAAAACGGAT
TTTCGTATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAATATAGCTTT
TCTCAAAGTTGACTCATTATATTTTTCTGATTTTTTGCACAATGATGCAA
AATGGCAATGCCTAAAATGTGACGGAGCCCGATTTTCGAAAAAAAATATA
TTTGGGCAAATTTGGGCCAAAAACTACCTAAAAATAGGGTTTTTTGGACT
TTGTGCAAAATCCTGTCATTACTTTTTTCTGATTTTTTGTACAAAGATGG
AGGGCAAGATTCTTTAAAGAATGGCTGAAGTGTTTTTTCCTGGAAAATTC
TTATTCGCCTTAAAAGACGGATTTTCGTATTATGGGGAAATTCCCTTTAA
CCAAATAAGAAAATATAGCTTTTCTCAATGTTGACTCATAATTTTTTTCT
GATTTTTTGCACAATGATGCAAAATGACAATGCCCAAAATGTGACGGAGC
CAGATTTTTAAGGAAAATCTCTTTTGGGCAAATTTGGGCCAAAAACAGCT
TAAAAGGTTTTTTGGGTCTGAACGGTTTAAGTGATTTTCGTATTTGGGGA
CATTCCTTTTTACCATTTTACATTTATTCAACACAACGCTTTATTTTTCC
ATTCTGAATTTTTGTACAATTATTGTCACTTTTTTCTTATTTTCATCTGA
TGTTAATCATTAGGTAGGTCCATTCAGCATGTTGCTTGTTAGTTTTCAAG
TAAAGGAACTAAAGCGCATTAAAAACGTCGTTAGAACATTTATGTAGAGG
TTTTATTTTTACGTAAATGTTCCCGTTTCATATCAGTCACATATTTCATA
TCAGGACACTGTCTATTGCTATATTATGCTTTATATAAGCAAAAAAAGTG
TTTTTGTTTTCCTCCTTCTGACCAATCTTGCTCCACATTCGTGTCAATTC
AATGTGAAAAAGCTTGTGAATTAAAATTGACGAGTAAGCAAACGATATCA
CTTATTTAAAAACAAAACCTTTTAAGCCTGAAAATTGTAAAAAAATGAAG
AACAGATTTAGCCTGAATCAAAATTTACTGGTTCTTATGAAGAAAATGCG
TGTAAAGAAGAAATTGTTTTCTATTGTTGCTCTTTCCCTACCATAGCTCT
GATGTGGGTACCATCTTTGCTTTGAGTTGGTTGATCACGTGGTTTGGGCA
TGACGTCAACAGTTTTGAAACTATCGTCCGATTGTGCGATTTCTTTTTGG
CCACGCATCCTGTCATGCCCGTTTATGTTTCAGTCGTGGTATGATATAAA
AAACAATTTCATGTTTTTATTTTATTCCCATTAAATACACCTATCAACAT
ATAAAATGTGAGGAGACTATGTTTATTATAAGATATGACGTCTAAATGCT
AGGCTGCACACATCCCCTCTGATAAGTTTTGATATAGGGGATGCGAATCA
GGCTCACAAAACCGTTCCGAACTTAGCAAAAAATCTGCTAACCAAAAAAA
GAGTTGAATGATAGAGAACTTTGATTGACAGTTTGTCGTCTTTTGTTATC
TTGAGAGTTTTGTTTGCTAATTCAATTAATTTCGATAAACAAAATGAAAG
AGAGGAGAAAGAGAGATTTCTAGCCATATGTTCTTTTTATTTGAATCTTT
ATTTGATTTCTATTTACGTCATCAAATAACTCAAACAATATACATCGAGT
TTTTTGAAAAATACAAGTCGCCAAAATTCTGCAAAATACATAGCTATTCG
GTAATTTTCTCGGAAGCGATATAAAAGCCTGATTCGCATCCCCTATATCA
AAACTAATTTGGGGATGCATGCAGCCTATCTAAATGCCTGAAATCGTTAT
ATTGACATTCTTACAGACATAGAATTTTGACGTCATTTCCTCGTAAATTC
CTCTACCTACCTTTTGTCTCTTTATAGACAAGAATTTCTATAAAGACTAT
GTTATTATCAAACCTTCTAATACTTTTTTGAAAAAATTCCTCTACAAGGA
ACGATTTTCCATTTTTTGGTGAATTTACCTGAAATCTGGAGATTACGAGA
TCTTTGAACACTCTTTTGTATGTAACTGTAGGGACGAAGGCGTAATAAGA
ATAAGAACAGGGGGTCAGTACTCGGGTCTGGAGGAAAGCCATTAAAGTTA
AAATCATGGGGAGAAGTCATAATTAGGGTAATAATAATTTGTAATAAAAT
GACCAAGTCCTTTCCACATTTTTCTTTATTTTCAGCTTGTAAGAAATCAT
AAAACACAGGTGCTACAACAAGAATGTGATATG Coding sequence (CDS) from alignment at sc0000093_pilon:6839..11871- >XLOC_043778 ID=XLOC_043778|Name=XLOC_043778|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=564bp|location=Sequence derived from alignment at sc0000093_pilon:6839..11871- (Clytia hemisphaerica_ch_hm2_pilon)
GATAAAAATATGAATCGGACGAATCGCATGTTGTCGCTCTTTTATGCTGT
CTTGAGTAAAGTGGACCAACAATTAGAACAATTTTTACTGTGGATAAAAA
TATGAATCGGACGAATCGCATGTTGTCGCTCTTTTATGCTGTCTTGAGTA
AAGTGGACCAACAATTAGAACAATTTTTACTGTGCTCTGATGTGGGTACC
ATCTTTGCTTTGAGTTGGTTGATCACGTGGTTTGGGCATGACGTCAACAG
TTTTGAAACTATCGTCCGATTGTGCGATTTCTTTTTGGCCACGCATCCTG
TCATGCCCGTTTATGTTTCAGTCGTGCTCTGATGTGGGTACCATCTTTGC
TTTGAGTTGGTTGATCACGTGGTTTGGGCATGACGTCAACAGTTTTGAAA
CTATCGTCCGATTGTGCGATTTCTTTTTGGCCACGCATCCTGTCATGCCC
GTTTATGTTTCAGTCGTGCTTGTAAGAAATCATAAAACACAGGTGCTACA
ACAAGAATGTGATATGCTTGTAAGAAATCATAAAACACAGGTGCTACAAC
AAGAATGTGATATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000093_pilon | genome | sc0000093_pilon:6839..11871 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 424-471:49 |
| Aaloc | 283-423:1137 |
| Aaloc | 190-279:5034 |
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