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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000256_pilon:156406..158727+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043776 ID=XLOC_043776|Name=XLOC_043776|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2322bp|location=Sequence derived from alignment at sc0000256_pilon:156406..158727+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTCCCCGATTGGAATTCTTGGAACTTTCAAATAACCCGATTCGGGATGT
ACCAGTTTTCGCGTTCAAAGGGATACCATCGTTAAAGGAACTTATCATTA
CGACAGATACGATAGTTGAATCTTCATTTGACGGATTGGAATTAGAATCG
TTGACGTTAATTGGTGTTAAAATGGAAACCTTGCCGGCAAGATTTCTAGA
TTCAAGCCGCGACACGTTGAAAGCTCTTACGGTACAAAACACAGAAATTG
AggaattgaaattcgattttcCAAACTTGGAGACATTGATTTTGACAGGA
AATcatttgacaacttttgtgTTTGACGGCGAGACACCAAACCTCAAAGA
TGTCactttgtcaaaaaataagttCAAACAGATCCAATGCATACAACCTC
TTCAAAATGTCACATATCTTGATGTCAGCTATAATCAGCTCAGAAATTTA
ACAGAAGATTTTTCCCGATGTTTTTCGAATTTGACAGATGTGAAATTGCA
AAATAACGCCCTATCTACACTCCCAATAGGCTTTTTCTCCAGCCTACAAA
ACACACTTCAATCGATCGACTTAAGTCATAACCCTTTGACAACTCTCTCA
ACAGACGAACTCAGGCTAATGTTAAAATTGAAAGAACTCAGGCTACAAAA
TATGGGTTCGATAGACATAGACCTTTCTCCTATGGAGAATTGGGAAAAAT
TCGTGGCAGAAAAAGGTCTTATCTTAGATCTTTCTTATAACACTAAATTG
AAGAGTTATCAAATTCCACGAAACATAAAACTTGACAAACTTATTTTCAC
CAACAGTGAATTGAAAACATTCCCAATCTTAAACCACAAACATGGTGATA
TAGTTCacattgaaattcaaatgaaCAACCTTGAGAAACTCATCATCGCT
AGACCTGTCGCACATTTGAATGCTTCCCACAACAAAATACGTTTCATAAA
TATCTCATATGAATGGACCAAGATTGATATTCTGGATGTTGGTCATAACT
TGATCGAAAGCACACGGAACATACACATTTATCCGAACACATATCTAAAA
TACGTCAATTTAACTTTCAATAAACTGAAACAAATTCATCCTTTCTATCA
AGCACCGCCAGACATACGAGGGAAATATGGCTACAAGATCAGCCCCATAC
GCATGGATTTTTCGTATAATTCGATCAGTTCCATTAATCGTTCCGCATTC
TTTGGCCTTCAACCGATGGTCTCTTTAAAACTTAATAACAACAACATAAC
CAGTCTACCAGATGATCTCTTACTGCAACAGCCTCACTTGAATAAGCTTG
ACCTCAATCATAATAAACTACAACAAGTACCGACTGAATTACTACGAACC
ATCAAACTTCTTTCCTACCTCCTACTCAAAGATAaccaaatcaatcaaat
cttACCTACAGATTTACAAGGTTTGTTCAGGCTTCTCTCGCTGGATTTAT
CGTCTAATTACAATCTTTCAAAACTACCTTCCAATTTTTTATCCAGGAAT
AAGCGTCTTCGTCGGTTCTCTATTTTCAATACGTCAATCGACTGCACGTG
TAACTTAACTTCAATCCTCCAGAACATCATAATGACAAATAAAAGACTAA
AATATGATGGACATTGTCTTGATAAGTCAACATCTCATTTACAACATTTA
AAGACAATAGTCGAAACAAGCGAGGCAAATCCTTGGTTTTGCAGTACAGA
CTGTCCAACGTTGAAATGCATTTTACAGAACGAATGTACTCAACGAATCG
ATACTTCCATGAGTTTTAACTGCTCGTGTCAAAATCTTAATAACAACACT
GACTCAAATACAATCTTCAATTTTCCAATCTTTAATAACCCTCCTTGGAT
CGCACCGGCTAGAGAATCACCGTTTTCTAGAAACTTAATTTTCTGTCAAA
CGACGCCTTGCTCAAGTGATACCGACTTTTTATCAAGAAATGGGACAAAT
AATTCTACAAGAAGGACTGACCCCTCATTTAGACACCCAGAATCGAAATG
TAGATGGAGCCTaaacaaagaaagtaatttacagaccggaattCTTGTCG
AATGTTCAAGGATTCCTGTATTAACTGAAATATTTTGTAAACCTTTTGGA
TTTCTTTCAACCACAATTTCTCCAAGAAGTAAAAATGCATCTTTTCCTCA
GACTACAAAAGCTATAATCGGACTCAGTGTGGGTGCATTATTTCTCGTTG
GAATTTTCGCGTATTTTGGTCATAAGTGGAAAGCACGACGTTCGGTGACA
AATAAACTTACAGATACGTATATTCTTAcagattttgattatttgaaTGA
CATTTCCTCAATTGATGGATAA Coding sequence (CDS) from alignment at sc0000256_pilon:156406..158727+ >XLOC_043776 ID=XLOC_043776|Name=XLOC_043776|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4644bp|location=Sequence derived from alignment at sc0000256_pilon:156406..158727+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTCCCCGATTGGAATTCTTGGAACTTTCAAATAACCCGATTCGGGATGT
ACCAGTTTTCGCGTTCAAAGGGATACCATCGTTAAAGGAACTTATCATTA
CGACAGATACGATAGTTGAATCTTCATTTGACGGATTGGAATTAGAATCG
TTGACGTTAATTGGTGTTAAAATGGAAACCTTGCCGGCAAGATTTCTAGA
TTCAAGCCGCGACACGTTGAAAGCTCTTACGGTACAAAACACAGAAATTG
AggaattgaaattcgattttcCAAACTTGGAGACATTGATTTTGACAGGA
AATcatttgacaacttttgtgTTTGACGGCGAGACACCAAACCTCAAAGA
TGTCactttgtcaaaaaataagttCAAACAGATCCAATGCATACAACCTC
TTCAAAATGTCACATATCTTGATGTCAGCTATAATCAGCTCAGAAATTTA
ACAGAAGATTTTTCCCGATGTTTTTCGAATTTGACAGATGTGAAATTGCA
AAATAACGCCCTATCTACACTCCCAATAGGCTTTTTCTCCAGCCTACAAA
ACACACTTCAATCGATCGACTTAAGTCATAACCCTTTGACAACTCTCTCA
ACAGACGAACTCAGGCTAATGTTAAAATTGAAAGAACTCAGGCTACAAAA
TATGGGTTCGATAGACATAGACCTTTCTCCTATGGAGAATTGGGAAAAAT
TCGTGGCAGAAAAAGGTCTTATCTTAGATCTTTCTTATAACACTAAATTG
AAGAGTTATCAAATTCCACGAAACATAAAACTTGACAAACTTATTTTCAC
CAACAGTGAATTGAAAACATTCCCAATCTTAAACCACAAACATGGTGATA
TAGTTCacattgaaattcaaatgaaCAACCTTGAGAAACTCATCATCGCT
AGACCTGTCGCACATTTGAATGCTTCCCACAACAAAATACGTTTCATAAA
TATCTCATATGAATGGACCAAGATTGATATTCTGGATGTTGGTCATAACT
TGATCGAAAGCACACGGAACATACACATTTATCCGAACACATATCTAAAA
TACGTCAATTTAACTTTCAATAAACTGAAACAAATTCATCCTTTCTATCA
AGCACCGCCAGACATACGAGGGAAATATGGCTACAAGATCAGCCCCATAC
GCATGGATTTTTCGTATAATTCGATCAGTTCCATTAATCGTTCCGCATTC
TTTGGCCTTCAACCGATGGTCTCTTTAAAACTTAATAACAACAACATAAC
CAGTCTACCAGATGATCTCTTACTGCAACAGCCTCACTTGAATAAGCTTG
ACCTCAATCATAATAAACTACAACAAGTACCGACTGAATTACTACGAACC
ATCAAACTTCTTTCCTACCTCCTACTCAAAGATAaccaaatcaatcaaat
cttACCTACAGATTTACAAGGTTTGTTCAGGCTTCTCTCGCTGGATTTAT
CGTCTAATTACAATCTTTCAAAACTACCTTCCAATTTTTTATCCAGGAAT
AAGCGTCTTCGTCGGTTCTCTATTTTCAATACGTCAATCGACTGCACGTG
TAACTTAACTTCAATCCTCCAGAACATCATAATGACAAATAAAAGACTAA
AATATGATGGACATTGTCTTGATAAGTCAACATCTCATTTACAACATTTA
AAGACAATAGTCGAAACAAGCGAGGCAAATCCTTGGTTTTGCAGTACAGA
CTGTCCAACGTTGAAATGCATTTTACAGAACGAATGTACTCAACGAATCG
ATACTTCCATGAGTTTTAACTGCTCGTGTCAAAATCTTAATAACAACACT
GACTCAAATACAATCTTCAATTTTCCAATCTTTAATAACCCTCCTTGGAT
CGCACCGGCTAGAGAATCACCGTTTTCTAGAAACTTAATTTTCTGTCAAA
CGACGCCTTGCTCAAGTGATACCGACTTTTTATCAAGAAATGGGACAAAT
AATTCTACAAGAAGGACTGACCCCTCATTTAGACACCCAGAATCGAAATG
TAGATGGAGCCTaaacaaagaaagtaatttacagaccggaattCTTGTCG
AATGTTCAAGGATTCCTGTATTAACTGAAATATTTTGTAAACCTTTTGGA
TTTCTTTCAACCACAATTTCTCCAAGAAGTAAAAATGCATCTTTTCCTCA
GACTACAAAAGCTATAATCGGACTCAGTGTGGGTGCATTATTTCTCGTTG
GAATTTTCGCGTATTTTGGTCATAAGTGGAAAGCACGACGTTCGGTGACA
AATAAACTTACAGATACGTATATTCTTAcagattttgattatttgaaTGA
CATTTCCTCAATTGATGGATAATTTCCCCGATTGGAATTCTTGGAACTTT
CAAATAACCCGATTCGGGATGTACCAGTTTTCGCGTTCAAAGGGATACCA
TCGTTAAAGGAACTTATCATTACGACAGATACGATAGTTGAATCTTCATT
TGACGGATTGGAATTAGAATCGTTGACGTTAATTGGTGTTAAAATGGAAA
CCTTGCCGGCAAGATTTCTAGATTCAAGCCGCGACACGTTGAAAGCTCTT
ACGGTACAAAACACAGAAATTGAggaattgaaattcgattttcCAAACTT
GGAGACATTGATTTTGACAGGAAATcatttgacaacttttgtgTTTGACG
GCGAGACACCAAACCTCAAAGATGTCactttgtcaaaaaataagttCAAA
CAGATCCAATGCATACAACCTCTTCAAAATGTCACATATCTTGATGTCAG
CTATAATCAGCTCAGAAATTTAACAGAAGATTTTTCCCGATGTTTTTCGA
ATTTGACAGATGTGAAATTGCAAAATAACGCCCTATCTACACTCCCAATA
GGCTTTTTCTCCAGCCTACAAAACACACTTCAATCGATCGACTTAAGTCA
TAACCCTTTGACAACTCTCTCAACAGACGAACTCAGGCTAATGTTAAAAT
TGAAAGAACTCAGGCTACAAAATATGGGTTCGATAGACATAGACCTTTCT
CCTATGGAGAATTGGGAAAAATTCGTGGCAGAAAAAGGTCTTATCTTAGA
TCTTTCTTATAACACTAAATTGAAGAGTTATCAAATTCCACGAAACATAA
AACTTGACAAACTTATTTTCACCAACAGTGAATTGAAAACATTCCCAATC
TTAAACCACAAACATGGTGATATAGTTCacattgaaattcaaatgaaCAA
CCTTGAGAAACTCATCATCGCTAGACCTGTCGCACATTTGAATGCTTCCC
ACAACAAAATACGTTTCATAAATATCTCATATGAATGGACCAAGATTGAT
ATTCTGGATGTTGGTCATAACTTGATCGAAAGCACACGGAACATACACAT
TTATCCGAACACATATCTAAAATACGTCAATTTAACTTTCAATAAACTGA
AACAAATTCATCCTTTCTATCAAGCACCGCCAGACATACGAGGGAAATAT
GGCTACAAGATCAGCCCCATACGCATGGATTTTTCGTATAATTCGATCAG
TTCCATTAATCGTTCCGCATTCTTTGGCCTTCAACCGATGGTCTCTTTAA
AACTTAATAACAACAACATAACCAGTCTACCAGATGATCTCTTACTGCAA
CAGCCTCACTTGAATAAGCTTGACCTCAATCATAATAAACTACAACAAGT
ACCGACTGAATTACTACGAACCATCAAACTTCTTTCCTACCTCCTACTCA
AAGATAaccaaatcaatcaaatcttACCTACAGATTTACAAGGTTTGTTC
AGGCTTCTCTCGCTGGATTTATCGTCTAATTACAATCTTTCAAAACTACC
TTCCAATTTTTTATCCAGGAATAAGCGTCTTCGTCGGTTCTCTATTTTCA
ATACGTCAATCGACTGCACGTGTAACTTAACTTCAATCCTCCAGAACATC
ATAATGACAAATAAAAGACTAAAATATGATGGACATTGTCTTGATAAGTC
AACATCTCATTTACAACATTTAAAGACAATAGTCGAAACAAGCGAGGCAA
ATCCTTGGTTTTGCAGTACAGACTGTCCAACGTTGAAATGCATTTTACAG
AACGAATGTACTCAACGAATCGATACTTCCATGAGTTTTAACTGCTCGTG
TCAAAATCTTAATAACAACACTGACTCAAATACAATCTTCAATTTTCCAA
TCTTTAATAACCCTCCTTGGATCGCACCGGCTAGAGAATCACCGTTTTCT
AGAAACTTAATTTTCTGTCAAACGACGCCTTGCTCAAGTGATACCGACTT
TTTATCAAGAAATGGGACAAATAATTCTACAAGAAGGACTGACCCCTCAT
TTAGACACCCAGAATCGAAATGTAGATGGAGCCTaaacaaagaaagtaat
ttacagaccggaattCTTGTCGAATGTTCAAGGATTCCTGTATTAACTGA
AATATTTTGTAAACCTTTTGGATTTCTTTCAACCACAATTTCTCCAAGAA
GTAAAAATGCATCTTTTCCTCAGACTACAAAAGCTATAATCGGACTCAGT
GTGGGTGCATTATTTCTCGTTGGAATTTTCGCGTATTTTGGTCATAAGTG
GAAAGCACGACGTTCGGTGACAAATAAACTTACAGATACGTATATTCTTA
cagattttgattatttgaaTGACATTTCCTCAATTGATGGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000256_pilon | genome | sc0000256_pilon:156406..158727 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 265-2331:256 |
| Aaloc | 1-255:1 |
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