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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000256_pilon:109143..110486+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043773 ID=XLOC_043773|Name=XLOC_043773|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1344bp|location=Sequence derived from alignment at sc0000256_pilon:109143..110486+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAATATTTGTGAAGACTTTAACTGGTAAAACTTTAGCTTTGAAATG
TGATCCAAATTATACAATACATGACTGCCAATGCCAAATACAAGATATGG
AAGGTATCCCTCCTTCTGCACAACGTTTAATTTTTACTGGAAAGCAATTG
GAAgttcatcacaaattgattgaCTATGGTATTAAAAAGGAAGATACTCT
GCACTTAGTACTTCGATTGCGAGGGATGATATCCAATTTCTCTGAATACG
ATGTCACTGACCCTGTAACAGCATTTTTAATGAAAGGTGACATAACTGGA
GTTGAAATCTCAGATGAACttttaaaagagaaaaggaAATCTATTCCAAA
CAGTGCGGAATACTCCAAATTGAAGATGGAGTACACTCATGAAAGTATAA
TGagtgaaaatcaaagaaaaaaattactcgGTGTGGCTGACTACATTCAT
TCTTTGCAACAAATTAGAAGAAAACCTCAGCAGGTTTTACAAGATATTAA
AATTATATTACCTGATGGTGTGATCAATGAAATTACTCTTGTAAGGTGTA
TTGAAAAGATTCTGAAAAGTCACCATCCATCAAACTCAGGTTTGAAACTG
GTTCTAAGGAGAACATGCCCAACTGAAGGATGTCTACCTTGGCATGTTGA
TGGAAGTTATTCTCAAGGTGTAGTTCAATACACACTTAACAGTGATAACG
AGTACACTGGAGGGAGATTATGTTATTATACTGATGATGTTGGTCTTTTT
GTACCGCAGCGATCAGCAGGTACTCTATCTATACATCAAAGAGAAATACA
TGCAGTCACCAAATTATTGTCAGGTGTACGATATGTCCTTTTTGTTGTTG
ATGGCACCAATGATTTAGGTGGTTCCGATGCAAATATTGTGAAGTTAAGA
CCAAAACTCTTGGCAAAAATGAAATCCTCAATGGAACTGTTAGATTGTGA
TTCAGATGACGAGGTTGGTGAAAACAGCAATATTAATAAAGTATATTTTG
TCTTCATTTCAATCAACAAAGTTTAAATAGAATATTTTGGAAGGTTATTT
AGCAAAATTTCAAGACTATGTGCTCTAATTTGCTGTGTAGAATCAATTCC
TTCTCAAAcaaaaaaccttgctttgaccactggcATATGACACTCTGCTG
CCAGCTATGTACTATCAgattgaaaaattgtaaaagctTTTACAGCATAG
CTGTAGTAATAGTTTCCGAAAGATGTGTCCAAAGTTACATCTCAAACTCT
TGTTTAGGACGATGAAAGTGATACGAGAAGTAACAAAAGGGATCAGAAGG
AAGACCCAACTCCAAGTCGTGCGAAACGAGCCAGAAAAAACTGA Coding sequence (CDS) from alignment at sc0000256_pilon:109143..110486+ >XLOC_043773 ID=XLOC_043773|Name=XLOC_043773|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2100bp|location=Sequence derived from alignment at sc0000256_pilon:109143..110486+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAATATTTGTGAAGACTTTAACTGGTAAAACTTTAGCTTTGAAATG
TGATCCAAATTATACAATACATGACTGCCAATGCCAAATACAAGATATGG
AAGGTATCCCTCCTTCTGCACAACGTTTAATTTTTACTGGAAAGCAATTG
GAAgttcatcacaaattgattgaCTATGGTATTAAAAAGGAAGATACTCT
GCACTTAGTACTTCGATTGCGAGGGATGATATCCAATTTCTCTGAATACG
ATGTCACTGACCCTGTAACAGCATTTTTAATGAAAGGTGACATAACTGGA
GTTGAAATCTCAGATGAACttttaaaagagaaaaggaAATCTATTCCAAA
CAGTGCGGAATACTCCAAATTGAAGATGGAGTACACTCATGAAAGTATAA
TGagtgaaaatcaaagaaaaaaattactcgGTGTGGCTGACTACATTCAT
TCTTTGCAACAAATTAGAAGAAAACCTCAGCAGGTTTTACAAGATATTAA
AATTATATTACCTGATGGTGTGATCAATGAAATTACTCTTGTAAGGTGTA
TTGAAAAGATTCTGAAAAGTCACCATCCATCAAACTCAGGTTTGAAACTG
GTTCTAAGGAGAACATGCCCAACTGAAGGATGTCTACCTTGGCATGTTGA
TGGAAGTTATTCTCAAGGTGTAGTTCAATACACACTTAACAGTGATAACG
AGTACACTGGAGGGAGATTATGTTATTATACTGATGATGTTGGTCTTTTT
GTACCGCAGCGATCAGCAGGTACTCTATCTATACATCAAAGAGAAATACA
TGCAGTCACCAAATTATTGTCAGGTGTACGATATGTCCTTTTTGTTGTTG
ATGGCACCAATGATTTAGGTGGTTCCGATGCAAATATTGTGAAGTTAAGA
CCAAAACTCTTGGCAAAAATGAAATCCTCAATGGAACTGTTAGATTGTGA
TTCAGATGACGAGATGCAAATATTTGTGAAGACTTTAACTGGTAAAACTT
TAGCTTTGAAATGTGATCCAAATTATACAATACATGACTGCCAATGCCAA
ATACAAGATATGGAAGGTATCCCTCCTTCTGCACAACGTTTAATTTTTAC
TGGAAAGCAATTGGAAgttcatcacaaattgattgaCTATGGTATTAAAA
AGGAAGATACTCTGCACTTAGTACTTCGATTGCGAGGGATGATATCCAAT
TTCTCTGAATACGATGTCACTGACCCTGTAACAGCATTTTTAATGAAAGG
TGACATAACTGGAGTTGAAATCTCAGATGAACttttaaaagagaaaagga
AATCTATTCCAAACAGTGCGGAATACTCCAAATTGAAGATGGAGTACACT
CATGAAAGTATAATGagtgaaaatcaaagaaaaaaattactcgGTGTGGC
TGACTACATTCATTCTTTGCAACAAATTAGAAGAAAACCTCAGCAGGTTT
TACAAGATATTAAAATTATATTACCTGATGGTGTGATCAATGAAATTACT
CTTGTAAGGTGTATTGAAAAGATTCTGAAAAGTCACCATCCATCAAACTC
AGGTTTGAAACTGGTTCTAAGGAGAACATGCCCAACTGAAGGATGTCTAC
CTTGGCATGTTGATGGAAGTTATTCTCAAGGTGTAGTTCAATACACACTT
AACAGTGATAACGAGTACACTGGAGGGAGATTATGTTATTATACTGATGA
TGTTGGTCTTTTTGTACCGCAGCGATCAGCAGGTACTCTATCTATACATC
AAAGAGAAATACATGCAGTCACCAAATTATTGTCAGGTGTACGATATGTC
CTTTTTGTTGTTGATGGCACCAATGATTTAGGTGGTTCCGATGCAAATAT
TGTGAAGTTAAGACCAAAACTCTTGGCAAAAATGAAATCCTCAATGGAAC
TGTTAGATTGTGATTCAGATGACGAGGACGATGAAAGTGATACGAGAAGT
AACAAAAGGGATCAGAAGGAAGACCCAACTCCAAGTCGTGCGAAACGAGC
CAGAAAAAACTGAGACGATGAAAGTGATACGAGAAGTAACAAAAGGGATC
AGAAGGAAGACCCAACTCCAAGTCGTGCGAAACGAGCCAGAAAAAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000256_pilon | genome | sc0000256_pilon:109143..110486 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 964-1050:1258 |
| Aaloc | 1-963:1 |
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