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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000256_pilon:29435..36285+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043769 ID=XLOC_043769|Name=XLOC_043769|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6851bp|location=Sequence derived from alignment at sc0000256_pilon:29435..36285+ (Clytia hemisphaerica_ch_hm2_pilon)
GATCAGATTGTGACAAGAGATCGCAAGTTGACAAGTAAAGACATCCTCAA
GACAATTGTTCACCGGTAAAAGCATGAGACTTTATGAGTTATTCCCACTG
ACCTTCATAAACCCTTggccaagctatatccgccatctttaatcAGAGCT
ATCTTTATGAAAAAGGGTTTCTGCAATGAATCCATTGCAGTGTTGAAGCC
TTGCCTAATGTTGAACTTAACCCGAAAATCAATACTATGTGtgttgaatt
tttcaaatttgcaacatttttgcaacttttccAACGATTCGAACGTTCTA
CAGCCAAACTCACTAAGTTAACTTTATATTTacgaatttgttttttttaa
tatggtAAGTGCAACCAACCATAGGAAATCGGGAAATAGGCAGGAAAGTC
AGTAATCGGCAGATCGGGATCCCCCCGacaacaagaaagtaaacaaaaca
tttttgtcaacaaaaccaaaaaagaactgaaaacCTTTTGTTTAAGGTGA
CACTACTGATTGGCTGGGTTTGTCTTGCTACTTTGACTACATTGAATTGA
TTCAATTTGCTTTAAAATTATCAACAACattaaaaagtgcaattaattTC
AATAGGCAATTAAGATTAAAcattattctcaacttcagttgagttagaat
ctgagaatgtgtgtctgtctgtgtgtctgtctgtgtgtgtgtatgtccca
aaactttggggcagcctggagacttcaaaaattgttcgatttggctgaaa
tttggcacacttgttccttgggtgaatatctgggggtgtttttttcattt
ttcaaaaattttgatttttggggtctggggacgagtttttcgccaaaacg
aggctaaaactttggggcagcctggagacttcaaaaatggtcggatttgg
ctgaaattttgcacacttgttccttgggtgaatatctgggggtgtttttt
cccattttttaaaagttttgatttttggggactggggacgagtttttcgc
caaaacgaggctaaaactttggggcaggctggagacttcaaaaatagtcG
GATTTGcttaaattttgcacacttgttccttgggtgaatatctgggggtg
ctttttaaatttttcaaaaattttgatttttggggcctgggaaggagttt
ttttgccaaaacgaggctaaagctttggagcagtctacaggcctccaaaa
tgatcggatttggttgaaattcggcacacttgttcatcgggtgaatatct
gggggtctacacctgggcctatgaatgatttgaagccactgaagttgagc
ccagtgcgttgcgcacgttcgactattagaATAGAGAATTGACATTAAAG
CAATAAAAGGAACTTGTTCCAAACGTCTCTTCCAAAATCATTACACATTT
CTTATCTCTAGACATGAACCACCTGTTGTGCACGAACCTTTCGAATTTCT
ACAGAACGACCAAGATATGATTGTCATCAACAAACCAGCCTCCATACCGG
TCCATCCCTGTGGCCGGTACCGTCATAATACCGTGGTCTTCATTCTCGGA
AAAGACCACGGGCTAGAGCGGCTGCATAGTATGTATGTTTATCTGTGGGC
CATAGGTAGTTAGGACTGGTTGCGCTCTAGTAACGACTTCCGGTTGGTTA
GACgcaaagatcgaattagagaagattttaaattgaagattttcaacatt
tttcaaaactttagacCAATAGTTAGTCgacattagcgcgcagtggccCT
GATTACCCATCATGCTTTGTGACTATGAAGTGACCTATTCGACTGACCGT
GTTGTGGTAAACAGTATGGAAATACTTAATTGTTGAATCCATCTTTTATG
CGAATCTTAATCTGTGTTGAGTCACGTCTCTACAATACGCATGTTGAAAG
GTATAGAGtttttttAACGTAATTCCCGCCATTatagaagcaaacgttcg
aatctgtagaggggatcccttacgcaaatcgaacgtttgcttccataatg
gcggaagttacgtaatttaacaaaacatgaGAAACCTCTATTTTTGTCTT
GATTATTCTTCGATCATCCGATCGTTTTTACTCTTTCCTTTTGTTTTAGC
GATCCATCGAATCGACCGTTTGACATCTGGTATACTTATGTTCGCCAAGT
CAGTATTATTTCGACTTAAGCTAAATTATTTAAATACCATACgctggtct
aatctcgacatccgtcATCTAATTAGGACACCCTTCTTTACAGTTGGGAA
TAAAAGGACGGTCGGAATAATACATCAGTCGGAGTTGCTGATAGAGAAAC
TATAATTTTGCTTAGAAAAAAtctttgtctatcagtgattccgacctttc
tattattcctatctttaaagaagggtgtcgaaattagatgaaggatgtcg
aaattagacaaACTCACGGTAGTATCTTTGaaactatatttttgtttttg
cttagcgatcagataggaaaaaatcttttgtgtatcagtgatttcgacct
tctcattattcctatctttaaagaagaaTATCGGAACTAgaagaggggtg
tcgacattagaccaacttacagtagtATTTTTGAATCCTTCACAACAGAT
GAATATCTGGTCAGAAGCAGAATAAGATACCCAACCTCGTCCACGTGTAA
CCTAGGCTTTATTTACGATAaatgatggacgccagagattATCATTTGGG
TGTcaattgtctgtacacaaacccgatatctacggcttatttcaaaattc
attgccgtatagggtctgttgtcattgtcttcaaaccgaccgctgcgatg
gagtgttggtaaGAGAGGGGAGACGAAGAGAGAaatgttgctatttataa
atcatacttcatcgcagaggtctccgtgggggaatttttttatcaaacag
acaatgcgcacagagtgtactacgaagcgataaacgtgagatacactctg
gcaCAGAGTAGGTATAAgtaagtatcaagtatcaaaagCCGATAATACAC
GGGGTACGAGGTTTTTGGCCACCGTATCAGGTAAAATGGTctgtttctca
aatttttacCCCCTTTTCTTCGATAAGATAAGATTTCTTTCACCGAAAGA
AAAACACATTTAGTATCTATCTTGaaacaacccagctggcacacaacgtt
ttttcgacgtttatctaacgttcacaacgtccatataacgttagatgaac
gttgaaacaacgttgtgggcCAGCTGGGAAAGGGCAAAATGTTCCCTTTC
AGAACACCAGAGAAAGCTAAAGCAATGGAGACAGCAGTTCACGGACGGAA
TGTGGAGAAAGTATACTACGCTCGCGTCGAAGGTGATTTCCCTAGGTAAG
TGGAAAGttgtttgtttttgtcaatACTGTTTGGCAACATATATACTCTT
TTCTCgagttcttttcttttttgtcgatAAAAGTTTGACCCATCATGTAA
TAGATTTTTTCTTGACTTACCCTTAGTTTCTGAGAatctttttatagaat
ttttctcGAGTCTGAGAACTTTTGTGTCACGTGAACAGCAGCTCTCACTT
GAAAAATAATGATCATAAGAAACTATGAAAAATGATCAAACATATTTCTT
TAGTCCGCCCATTATTAACGacttttaaagaaaacctcATTTTTTCATTA
CTAAGCAATGAATATAAAGTGCTCATTAAAAAACATTATCCAAATGAAAC
CGGACAGGCTGTAAATTTCgcatctacaatcagtgccaaaatacttggca
caaaagggaaattccccacgaaaTTCTATAaacacaaacaatttggaagc
gctctaaattaggttggaagggtagagttttaactctgagttttaacgct
agacttaagatcttaggatctgaggatccaaaagttcaaaaatggtccgg
tagggcttgaaatatagcctagaaaccaataaatccctcacagatcgaaa
tattcgatgaagccaagttgaaggcccgaaattaacattctcgctcgaac
ttcaattttcgaaaaatggtagaatagccaaaattgccaatatgttatgg
cactgattgttgGTCTGTTTGTGTCTGTGCTTGACCATCTAAACCTAATA
TGTGGTTAGACTGGagattcaaaaataattaactGGAATTTGgcgcaaag
cttctgattgtctgtttttttttcatttttcttattttcacattttcagg
TCTGCGGACTTAATGATATTCTCTACAGTCAACACGGCATATTCTCTTGT
TACAAATTTTTCCAAACcattaagggaacttattttggtgagaactaatt
ttggcaaatttgatgagtttagacaaaattcgccaaaatgaatttttgtt
gtttttttgtctcAATATCcttaaattcatcaaaattgcaaaaaaggACA
GGTTTAGGTTattgtcattcgccaaaattagatctcgccaaatttaccaa
attttgGACCATTCGTCAAAATAAGTTCTTgtcaatattaaaaattttca
aaatttagtaattcgccaaaattagttttcgCCGAAATAAGTTCGCTAAA
TGTAATGAGCTGTTATTGAATAATTGCCAACTCCAGTGCAGGATTTCTCG
TTGTCAATCAATTTCGTTCACTTTGGTTTATATTTCTAGTGAAAGTATTG
TCGTTGAAGAACCGTTATTAACCATGTCTCATAAAATCGGTGTTTGTCAA
GTTCATGTAGACGGGAAACCATGCTCTACCACTTTTCACAAGATATCGTT
CAATGGTAAAAGCAGCTTGGTTCGTTGTAAGTTAATTCTCATGCTTCATT
CTTTTtattagtgttttttttttcttttgcactgaggtttttaaatgaaa
caatagagtttCGAAatctaagccaatcagctgtgctttaaacattcttt
tgttttagatctctattgataaacttctttggttaaaaatttctattatg
tttaatcCTACTAATAGGTGAATTCCCGTTGGGGGTCatatatacagtgg
agtctccataactcgaaaaccACACGTGTAAAACAaagttgttcgagtta
aggatatTTCGAATTATGATTAACATttaaaaggcattgttaactgaagg
gacgaggaAGCTTGTTCAAGTTAATAAGGAGATATTCAATTTAAAGAGgt
tgagttaaagagactctattGTATTATTTCCAAAAGGATCTTTAGTCCTT
GTACACGAGCGTCACGGgtgatttttcacttttagaAAACTTGATAGGTT
AGCCTCCGTACTTTTTCTTTCCGAAGAAGAAgagttttgtttcatttttc
cataaatgtacccgtttcatatcagacacatatttcatatcaggacagtg
tctacctattgttatatcatgctgatataagcaaaaaatggttattattt
cctctttctgaccaatcttgctccacatccgtttCAAACCaaagtgaaaa
agcttgtaaattaaaattgacgagtaagcaaacgatatcactcttattta
aaaacaaaacctttaacatgtAAGATTAAATAATGTTTATTTCCAATCCT
TTATTCGGTGTAGGTTTACCACGTACAGGACGTATGCATCAGATACGAGT
CCATTTGCAATGGCTTGGTCACCCCATTCTAAACGATCCGATTTACAATC
ATGCCACAGCTTGGGGTGAAGGTGGTGGAAAGAAAGGGACAGAGATTGAT
GTCAAAAAGGTTTGAAATACGTGTTGGGTATAGCCTGGATATATTCTTTT
TAATCAAGCCTGGAATCAGAAGCCTGATATAAGGCTGACggcaatagcga
gtttatgtattcgagataaatcgagggggacggtataaagcaaagctgac
atggggtcaaaatcgccgtccactttgctcgacgacggtaaaaacaccaa
gataccgtcgtctgtttaggtgagcaaaggcgatattgagccgtacatca
actatcgactttgttttgtatcgatttcacttaccgtcgccctcgatatc
ctccgatacataaactcggtaatatagCGTGTTTAGGTGGTGTGTTTAGC
CTCTACGCTATATGTCTTTTTAATCAAGCCTTGAATCATAAGGCTTAGCT
AAAGCTGATGGCACTAAAGCGTCATCGGCGCTTagcttttttaagctttt
ttaatTCTAGTAAGTGAAACTAGCTTGGATTCCTAGGATATTCTAGAGAT
TATTATGATCAAATCTAGAATCACAGGCTCATAGGTACGGAAAAGTTTAT
ACCGATAGAAATTGGGCTTAAAATTGGGAAACCGGTCTCTCGGAAGACGC
TCTTTTTCAGACCTGTACAAATAAAACGATGCTAGTATTTTGTTTGATGA
GAAATAATAGAATTGCTGAACAAATTCCAGGTGGTGGCTGAACTCATCCG
AACACGTAAGGACAAGTCGTACGACGACGCCACTGGTGGTCAGGACGAAA
ATAGAGCTACGGCAAAATCCGAGAAAGACAATAATAATCATCGTCAGTCG
AAAAAGCTGAAAACAGACGACGGGGGTTCTGTCGAAGTAAAAACGGAGAT
AACGTCTAATTCTTCGAATTCAATAGACGCTGATGCTAATCAGAAAAGTA
AAGTTCAAAATGGCTGTTCACTAAAAGGGGTGAGAGAAACAGACAATATA
AAAACGAACGGTACTTCAGACAAGTTAAGTCATTTAAATATTCAGAAGGC
AAACTCAACTGAGTGTGAAACAAACTCTACGACAGAGAGCGAAACTTCTG
CAATGGAGAACAAAGTTAAAGACCTTTCTACTCTAAAATGTGAAGAAAAT
TCTAATAAGGAGAGTGTGGCGGAGAAGAGAGAAGGAAGCTCTGGGAAGGA
G Coding sequence (CDS) from alignment at sc0000256_pilon:29435..36285+ >XLOC_043769 ID=XLOC_043769|Name=XLOC_043769|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2256bp|location=Sequence derived from alignment at sc0000256_pilon:29435..36285+ (Clytia hemisphaerica_ch_hm2_pilon)
GATCAGATTGTGACAAGAGATCGCAAGTTGACAAGTAAAGACATCCTCAA
GACAATTGTTCACCGGATCAGATTGTGACAAGAGATCGCAAGTTGACAAG
TAAAGACATCCTCAAGACAATTGTTCACCGACATGAACCACCTGTTGTGC
ACGAACCTTTCGAATTTCTACAGAACGACCAAGATATGATTGTCATCAAC
AAACCAGCCTCCATACCGGTCCATCCCTGTGGCCGGTACCGTCATAATAC
CGTGGTCTTCATTCTCGGAAAAGACCACGGGCTAGAGCGGCTGCATAACA
TGAACCACCTGTTGTGCACGAACCTTTCGAATTTCTACAGAACGACCAAG
ATATGATTGTCATCAACAAACCAGCCTCCATACCGGTCCATCCCTGTGGC
CGGTACCGTCATAATACCGTGGTCTTCATTCTCGGAAAAGACCACGGGCT
AGAGCGGCTGCATACGATCCATCGAATCGACCGTTTGACATCTGGTATAC
TTATGTTCGCCAACGATCCATCGAATCGACCGTTTGACATCTGGTATACT
TATGTTCGCCAAAACACCAGAGAAAGCTAAAGCAATGGAGACAGCAGTTC
ACGGACGGAATGTGGAGAAAGTATACTACGCTCGCGTCGAAGGTGATTTC
CCTAGAACACCAGAGAAAGCTAAAGCAATGGAGACAGCAGTTCACGGACG
GAATGTGGAGAAAGTATACTACGCTCGCGTCGAAGGTGATTTCCCTAGTG
AAAGTATTGTCGTTGAAGAACCGTTATTAACCATGTCTCATAAAATCGGT
GTTTGTCAAGTTCATGTAGACGGGAAACCATGCTCTACCACTTTTCACAA
GATATCGTTCAATGGTAAAAGCAGCTTGGTTCGTTTGAAAGTATTGTCGT
TGAAGAACCGTTATTAACCATGTCTCATAAAATCGGTGTTTGTCAAGTTC
ATGTAGACGGGAAACCATGCTCTACCACTTTTCACAAGATATCGTTCAAT
GGTAAAAGCAGCTTGGTTCGTTGTTTACCACGTACAGGACGTATGCATCA
GATACGAGTCCATTTGCAATGGCTTGGTCACCCCATTCTAAACGATCCGA
TTTACAATCATGCCACAGCTTGGGGTGAAGGTGGTGGAAAGAAAGGGACA
GAGATTGATGTCAAAAAGGTTTACCACGTACAGGACGTATGCATCAGATA
CGAGTCCATTTGCAATGGCTTGGTCACCCCATTCTAAACGATCCGATTTA
CAATCATGCCACAGCTTGGGGTGAAGGTGGTGGAAAGAAAGGGACAGAGA
TTGATGTCAAAAAGGTGGTGGCTGAACTCATCCGAACACGTAAGGACAAG
TCGTACGACGACGCCACTGGTGGTCAGGACGAAAATAGAGCTACGGCAAA
ATCCGAGAAAGACAATAATAATCATCGTCAGTCGAAAAAGCTGAAAACAG
ACGACGGGGGTTCTGTCGAAGTAAAAACGGAGATAACGTCTAATTCTTCG
AATTCAATAGACGCTGATGCTAATCAGAAAAGTAAAGTTCAAAATGGCTG
TTCACTAAAAGGGGTGAGAGAAACAGACAATATAAAAACGAACGGTACTT
CAGACAAGTTAAGTCATTTAAATATTCAGAAGGCAAACTCAACTGAGTGT
GAAACAAACTCTACGACAGAGAGCGAAACTTCTGCAATGGAGAACAAAGT
TAAAGACCTTTCTACTCTAAAATGTGAAGAAAATTCTAATAAGGAGAGTG
TGGCGGAGAAGAGAGAAGGAAGCTCTGGGAAGGAGGTGGTGGCTGAACTC
ATCCGAACACGTAAGGACAAGTCGTACGACGACGCCACTGGTGGTCAGGA
CGAAAATAGAGCTACGGCAAAATCCGAGAAAGACAATAATAATCATCGTC
AGTCGAAAAAGCTGAAAACAGACGACGGGGGTTCTGTCGAAGTAAAAACG
GAGATAACGTCTAATTCTTCGAATTCAATAGACGCTGATGCTAATCAGAA
AAGTAAAGTTCAAAATGGCTGTTCACTAAAAGGGGTGAGAGAAACAGACA
ATATAAAAACGAACGGTACTTCAGACAAGTTAAGTCATTTAAATATTCAG
AAGGCAAACTCAACTGAGTGTGAAACAAACTCTACGACAGAGAGCGAAAC
TTCTGCAATGGAGAACAAAGTTAAAGACCTTTCTACTCTAAAATGTGAAG
AAAATTCTAATAAGGAGAGTGTGGCGGAGAAGAGAGAAGGAAGCTCTGGG
AAGGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000256_pilon | genome | sc0000256_pilon:29435..36285 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 658-1128:6381 |
| Aaloc | 514-657:5566 |
| Aaloc | 376-510:4641 |
| Aaloc | 283-372:3254 |
| Aaloc | 235-279:2102 |
| Aaloc | 67-231:1413 |
| Aaloc | 1-63:1 |
|
