|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000403_pilon:189521..194981- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043742 ID=XLOC_043742|Name=XLOC_043742|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5461bp|location=Sequence derived from alignment at sc0000403_pilon:189521..194981- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGCAATTGACATTACGTGGAACTTTAAAAGGTCATAATGGATGGGT
CACCCAAATTGCCACCACACCTCAAGATCCAAACCAAATTTTGTCAGCCT
CAAGAGGTATCCATATTTACTGAATTTTTGAAGCTCTAAATGTTTGTGTG
AAAACAAATTATTTGAGAAAAGTGCTATCTTGAACAGTCTATGCCACTAA
CAAGATCAGGAAGATTGGGCGGTTCCAGTTACAGTCTGTTATGACATGGA
CTTTCCGTAACAGTTTACTTTTGTAGAGCCTCCCGATTTCCGTAATATTC
AAGAATTTTTAAGGATATCTTGGATTTTTTTATACCACCAATGACCAATA
GGAAAATCCCGCATTTTCTGGAATCTTTTTCAAAATTTCTCAGGATTTCC
AAGCGATGGGTACATAATGCCTAAAACATAATGCATAATGCATAATATCT
GAAAAATGTCAATTTTAGAGGCTATAATAAGTAAAATTTGAAAGAGAATA
CTTTCAACAAAACAAATATACCACTTTCTGCCAGAAAATAAAGGGTAGAA
AGTTGTAAGTTTGAATTTTGGATGATGAAGAAAATCCATGATCCACTGAA
AATACATGTCGCCATTTTGATTTTCATAGTTGTATTTTATAGAACGTAGT
ATAGTGTAAAACACGAAAGTATCTCCTCCGTATATTACTTTTCTAACTTG
AAAACGTAAAATTTTATAGCAAGATCTTTATTCTGGCTTTTCTCAGAGAT
CTTTTCGAAGAATTGCTAATAAATTTACGACCCTGCCTATGCCCCGGACA
GTCCGGGGCAAATGTCTGGGGTCTGAAAAAAATAACTTTTTCCCCGGACC
TACGTCCGGGGCTCCAATTTTTGCGCCATAAATTTACCCCGGACGTATAT
CGCCGAGCACACTTTAAACCCCCGGACATTTTATCCAGGTCTAAAACTCA
CTTACTTACCTTACCTTACCTTTCTCTGTCTGATCAGGATCCATTTTTCA
GCTTTCGGTTAGATTTTAGAATTTGATTGCTGAACAAACCACGCTTGAGA
TTTAAGGTTCAAATACAGGCCTCACACACGAAACGCCAAAATCAGGACAT
TACAAAATCTTTTGGAAGACGGCGTTTGTCCACGGAAGAATATTTCAATG
AATTAGAAAAAAGCCCGCGCGGTCAGCGATTCTATAAAAAGCGACCGCGC
GGGCTGTCTGGGGCGTCCGGGGTAGTCTCTCAAAAACAAATAATACGGAC
CCCGGGCACGCATCAAAAAAACCCCGGACTGTCCGGGGCATAGGCAGGGT
CGTATAAATTTTGATGGGTTTTCCCTCTTAAAAAGCATTAACCATGTGAA
TGCTTTTTGTTAAATAAGCCAATATCCAGCCAATATAAATTAAAGAGCTT
CATACGAAAGGTAGATCTAAGAAATTGGAAGTCAAATTCTTTTACATTCG
AAATGTTATGTGTTTACCTTTTTTTTGAGAAAGAAGAAGGGGGAAACCTT
TCAGATCTGTTGCATCTTATTATTATTTATGCTGACGGAAAACCCTTTGT
TGTTATGATTCGAATGTTTTCTCTTTCGTTCGGATTCGAAAAGTAAATAT
CATGTCTGGGGAAATCCCTCTGATTGGAATGTTTACTTAAGAAACTTTTC
TAAAGAGGTTTTTGCGGTTCTAGCCTCTACAAAGGAGAGTTTTAGAAAAT
ATAAAATCGTTCTGTATATTACACAATACTATTATCATGCATTATGGTTT
ATGCATTTTGTAGCCGTCAGATTTCCAAGTGAAAAAAAAATTCCTAACAA
CCCTGTCTACAGAGGGGGTATGGTTTTTCTCTGAAATCACCCATTCTTTA
GAATGGGGAAAAGTTTTCTCAAGTGGGAACATTTTTAAATTGAATTCTGT
CTGTTTGGGAAGATTCTTCCTCATCAGGAAGTTGAATAGTGACTGATTTT
TTGGCAAAGCTGTACGATGGCTGGCAAAAGCTGAAATGTTTTTGAGGTCT
TAAAGTATCAAACTTTAAGATTTTTCACCAAAAGAAAAATAAACTTCACC
GTGGAAATCTTGTTTGGTTGAGAAAAAAACTACTGAAACTTCCAAACAGG
AACTTCCAACCCAATCAGGAAGTCCTTGCGAAGTTGTGCACCGACTGGAT
ATGATATACCGTTGGAAAGGTTTTTTCACACAGATTCTAAAAATCATCAC
CATATGCATTTCAAAATGAACTTAGACACTTCCAGAACACATGTTAGTGT
ATTTTAATAGCAGGCAGTAGCAGGCCATATTTTAAAAAGGGAGGGCAGCA
TCCGTTGGTGGTGAAAAAGGGCACTTTTCTCGTGTTTCTCCACTAAAAAG
GCTGTTATTACCAAAATTTTAGTGATTTCAGGAGGGCTAAAACGGCCTGA
ATAGTGTGGAAAGTTTTGTCTGTAACAGGGGGCTGGGCGACACAGGAATT
CCAAAGGCAAAATTTTTCTCTGAAATTCGAAATATCCAAGGCGAGAGAAG
AAAATGTATGAATTCCCCATGCAAATGAATTAAAAAGCCAAAAAAGAGAT
TCTTAGCGACAGCTACTTGCTAGTATATGTCAATAATGACCTTCATTTTT
AAGGAAATATTTAGTCACATTTTTGCGAATCTTGTTATACTTTTTTTATA
ATTATCTTTCAACCTTCAAAAAACTTTTTGTCATTAATTTTTGCACACTT
TACCTTTTATAAAACAGAAATAAGTATCTCAAAAAAGGAGCATAATTATT
CTCTTCCTTTCCAAAAAAACATATTAGTCCTTTAATTACTTTGCATCCCA
CTTCTAAAAATTCTTCCCCATTCTGAAGAATCTTCCTTTCTGATTGTAGT
GGCATATACTTTTGAATTTGTATGGAACGCATCTTTTCAAAGGACTGGGA
AACCATTTCTGTGTTTTGCAAAACAGTTTTGGGCCCATATTTTGTTGCTC
TGCTCTTAATTACAGCCTTAACTTCTGAGATTTAAATGCGCAACTACATG
GCTTTAGATATTGTAGAATTTTTATGTGTGCAATATAAGCGCTTATCACT
AGCTCTTTGAATGGGGTGGAAAACATGTAATCGCATCCTTAACTAGTCCA
TTGTTTAAACAAACTAATAAGCTTTTTACAAGACTTGTGAAAAAATTCCA
AAAAGATACCCTTTCAATGTTACAGTGTTGAAACCTTTCTCCCTGATTAT
GGAACACTTAAGATTCCTTAAATCAACTTTGTATTTTGGTACCTTAATAT
TCACAACAATCTGTCACTAAAAAACTTTTCTATTACATTTAGACAAGACC
CTCATTTTGTGGGAATTGACTCGTGATGACGAAATGAACTATGGAGTACC
AAAGAGATGCCTCACAGGACACAACCACTTCATCTCTGATGTAGTCATGT
CTTCTGATGGACAATTCGCACTCTCTGGATCATGGGACAAAACTCTTCGT
CTTTGGGATTTGAACGCGTAAGTTGATTACCTGATCTATTACCTTAGGGA
AGAAATTTTCGCGAGAAGAAATCTTTGCGGAATTTAATTTTGCGAATGAG
CCGATTTCAAGAGTTTCACGGAATTTAATTTCGTGATTGAGAAATTTCAA
AAGAATTCTTTTTACAGAGAAAATGTTTTTGATATTTTTCATCAATTTCA
AGACATATTTCAGTCACATTAACAAACTTTAACAACAAAATTATAACATC
AAATATGAATTTTTTTATGATAAGTCATGATTAAACTTCATTGCCGTCAT
CTTCCTCCAAAATTGAGTTTCGTGGAATTTAATTTCGCGACTTAGCCATT
TTGGTGTGTTTCGCGGAATTAAATTCCGCGAAAATTTCTTCCCTTAAGGT
ATTATTAGTTTATACACAACCAAAAACTTCCTTTTTCTAAAAGATTAAAT
TTGTTATGTGCTAGTATTTGAGTTATGTAACTCTCAGGAAAACAATACTT
ATGATTAAGCAAATTACATAATATACTCTCTTCATATTTTTTCCCTATCA
CTGAAGGTGTTATATTAGGCATTTTGGATTCACAATTCAGTTACCTTAAG
GAGCAATTTTTGCGGGAAATAATTTTGCGGTTTTTGCAGATTTAGGCCCA
AACCGTAAAATTAAGTTCCCGCAAAAATTTTCAAATGTGAAAAACAAAGG
TCTAATATTCACAGTACCGCGCTAATTTTCTTTCAAGTGAGAAATCCGCA
AAATTAAGTTCCCGCAAATATTAAATATTAAATCTTGAACTTCGAACTGC
AAAAATTAGTTCCCGCAAAAAAATAATTCCCGCAAAAAATAATTCCCTTA
AGGTATCTGAAATCCAAAGTAAATTTTCTGTTTTAAAGGATCACCCATTT
TAATCAAATTATTTATTTATTTCAGTGGAATCACAACTCGTCAATTTGTT
GGACACACTAAAGATGTCTTGAGTGTTGCCTTCTCTGCTGACAACCGACA
AATTGTCTCTGGATCCCGTGACAATACCATCAAATTGTGGAACACATTAG
GACAATGTAAATACACAATCAGCGATGAATGTCACACCGAATGGGTCTCA
TGTGTTCGATTCTCACCAAACACAAAATCCAATCATCGTTTCATGCGGTT
GGGACAAGGCTGTTAAGGTAAATTTCTTCGTTTAAGCACGTTGAGTTTTT
GAAATGATTTTCGGATAATTATGACAGGAGGAGAGAATGGGGGTTATTGG
GTCTAATTCAGATTTGAATTTTTAATGAAAATTATTTTTCAATTAGGTCT
GGAACTTGACCAACTGTAAATTGAAGATCAACCATTTCGGACACACTGGA
TACTTGAACACAGTTACAGTCTCTCCTGATGGTTCATTGTGTGCTTCTGG
TGGCAAAGACGGAAGAGCTATGTTGTGGGATTTGAACGAAGGAAAACATC
TTTACACTTTGGATGGTGGAAATATCATCAACTCATTGTGTTTCAGTCCA
AACAGATACTGGCTTTGTGCTGCTACAGGACCAAGCATCAAGATCTGGGT
AAGTTCAGAAAAACTAGCATCCAAATATTGGTTTTCAGTTTCAATTAACA
GTCCATGTTAAAATCAAGTTTATCTGGATAGATTATGTGTTCTGGAAATT
TAGCTCAATGTCTGGTTCAGAGCTAAATAGCACTTTGTCTCTTACTGTTG
TTGACTTCTCTTATCAAAATTCTTGTTAATTTACATCAGAAAGCTGGACG
TTCAAAAGATATCAAAATCTCATTCTAAACTGCCCTCTCGTTTTGGTTTT
AATTTTGAAATCATTTAAATGTTCCTTCCTTCTTTAGGACTTGGAATCCA
AATCTGTCGTTGATGAATTGAAACCAGAGGTGATAAGCGTCAACAACAAA
TCCAAACAATCAGCTGAATGCATCTCCTTGGCCTGGTCCGCTGATGGACA
AACATTGTTTGCAGGGTACACAGATAACCTTATTCGTGTCTGGCAAGTCA
CAAGAATGTAA Coding sequence (CDS) from alignment at sc0000403_pilon:189521..194981- >XLOC_043742 ID=XLOC_043742|Name=XLOC_043742|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1898bp|location=Sequence derived from alignment at sc0000403_pilon:189521..194981- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGCAATTGACATTACGTGGAACTTTAAAAGGTCATAATGGATGGGT
CACCCAAATTGCCACCACACCTCAAGATCCAAACCAAATTTTGTCAGCCT
CAAGAGATGGAGCAATTGACATTACGTGGAACTTTAAAAGGTCATAATGG
ATGGGTCACCCAAATTGCCACCACACCTCAAGATCCAAACCAAATTTTGT
CAGCCTCAAGAGACAAGACCCTCATTTTGTGGGAATTGACTCGTGATGAC
GAAATGAACTATGGAGTACCAAAGAGATGCCTCACAGGACACAACCACTT
CATCTCTGATGTAGTCATGTCTTCTGATGGACAATTCGCACTCTCTGGAT
CATGGGACAAAACTCTTCGTCTTTGGGATTTGAACGCACAAGACCCTCAT
TTTGTGGGAATTGACTCGTGATGACGAAATGAACTATGGAGTACCAAAGA
GATGCCTCACAGGACACAACCACTTCATCTCTGATGTAGTCATGTCTTCT
GATGGACAATTCGCACTCTCTGGATCATGGGACAAAACTCTTCGTCTTTG
GGATTTGAACGCTGGAATCACAACTCGTCAATTTGTTGGACACACTAAAG
ATGTCTTGAGTGTTGCCTTCTCTGCTGACAACCGACAAATTGTCTCTGGA
TCCCGTGACAATACCATCAAATTGTGGAACACATTAGGACAATGTAAATA
CACAATCAGCGATGAATGTCACACCGAATGGGTCTCATGTGTTCGATTCT
CACCAAACACAAAATCCAATCATCGTTTCATGCGGTTGGGACAAGGCTGT
TAAGTGGAATCACAACTCGTCAATTTGTTGGACACACTAAAGATGTCTTG
AGTGTTGCCTTCTCTGCTGACAACCGACAAATTGTCTCTGGATCCCGTGA
CAATACCATCAAATTGTGGAACACATTAGGACAATGTAAATACACAATCA
GCGATGAATGTCACACCGAATGGGTCTCATGTGTTCGATTCTCACCAAAC
ACAAAATCCAATCATCGTTTCATGCGGTTGGGACAAGGCTGTTAAGGTCT
GGAACTTGACCAACTGTAAATTGAAGATCAACCATTTCGGACACACTGGA
TACTTGAACACAGTTACAGTCTCTCCTGATGGTTCATTGTGTGCTTCTGG
TGGCAAAGACGGAAGAGCTATGTTGTGGGATTTGAACGAAGGAAAACATC
TTTACACTTTGGATGGTGGAAATATCATCAACTCATTGTGTTTCAGTCCA
AACAGATACTGGCTTTGTGCTGCTACAGGACCAAGCATCAAGATCTGGGT
CTGGAACTTGACCAACTGTAAATTGAAGATCAACCATTTCGGACACACTG
GATACTTGAACACAGTTACAGTCTCTCCTGATGGTTCATTGTGTGCTTCT
GGTGGCAAAGACGGAAGAGCTATGTTGTGGGATTTGAACGAAGGAAAACA
TCTTTACACTTTGGATGGTGGAAATATCATCAACTCATTGTGTTTCAGTC
CAAACAGATACTGGCTTTGTGCTGCTACAGGACCAAGCATCAAGATCTGG
GACTTGGAATCCAAATCTGTCGTTGATGAATTGAAACCAGAGGTGATAAG
CGTCAACAACAAATCCAAACAATCAGCTGAATGCATCTCCTTGGCCTGGT
CCGCTGATGGACAAACATTGTTTGCAGGGTACACAGATAACCTTATTCGT
GTCTGGCAAGTCACAAGAATGTAAGACTTGGAATCCAAATCTGTCGTTGA
TGAATTGAAACCAGAGGTGATAAGCGTCAACAACAAATCCAAACAATCAG
CTGAATGCATCTCCTTGGCCTGGTCCGCTGATGGACAAACATTGTTTGCA
GGGTACACAGATAACCTTATTCGTGTCTGGCAAGTCACAAGAATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000403_pilon | genome | sc0000403_pilon:189521..194981 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 778-951:175 |
| Aaloc | 526-777:716 |
| Aaloc | 481-525:890 |
| Aaloc | 283-477:1086 |
| Aaloc | 109-279:2168 |
| Aaloc | 1-105:5462 |
|
