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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000028_pilon:1529950..1533796- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043727 ID=XLOC_043727|Name=XLOC_043727|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3847bp|location=Sequence derived from alignment at sc0000028_pilon:1529950..1533796- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGCTTTATGTGGCGGCAGCTATGCACGATTTTGATCACCCTGGACG
AACGAATGCTTTCTTGGTTGCTACCCTCAATTCCAAGGTTTGTTTTTGTT
AGGACGTCCTCTTTCACTTGTGACTCTCTCCTTGAGTTTCTTACAACTTG
AGTTATCATACGGCGAACAAATCGAAAAAATACAGACTCCATAATAAAGT
TTTTTCACATGGATGTAAAAAACTTACTCGAAAGACCTTCGTTCGTCAAT
CTCTCTTTTGGGGATTTTTCTAGGCTGCGCGCATCCCCAGAATTTATTTT
GTTATAGGGGATGCGTATCGTGTATGAAATTCTCGTCCGAGAGTTACCTC
AAATTTGGGGTAACCAAAATTTGCATAAATTTACATAATTTCGTCACATC
CAATCAAAGAAAGAAAAAAATCATTGTGCTGTTGTTTTCATAATTATCAA
TTTTCATTCACTGAACAAAGAAAAAAAGAAGTCATTGTATTGCTATGACG
CATAATCAAAAAAGAAAAAAGAAAATACGGGGGTAAGTTGGGACAGAAAT
ATTTTAGACGATACATTTTCCCATTTTTATACCTTAAGCGGGCGCTATTT
AAAAACAGATGCATTTTGATTCATGATCGGATATTTGCGCGATTATCTTT
GATTTTCAGCAACTTCATACCCGGCGGTATGAAGGCTCAAATAGGATAAA
ATTCACTAGGAATTGGAGAAAAATCCCATTTTCTCAAAAGTGGGGAGGCT
GAAGTCTCCCCCGTCTCCCCGCTTCCTTGGTTGCTGAAACAAAAAGAAAT
GAAGAAATTTTTCTCCTTTTTATTGAATTAAGGCTGTGCAATGTAGCGAG
CACCTCACTAAAAACCGGGATTCTTTCTTCTAATTGCGTAGAAAAAACGC
GCGGGTGACATCTAGAATAGACAATGCAACGGATGAAAAAGTTTCATCTT
TTCAAAACTTTTCTCGCCACGAAATTTCAGTTGGCATCCTAAGTGTTCTA
TTTTTTAGTTTCCCACCCACACATTTCGCTTTTAGACCGTTAAAAATACC
ATACTGTGGAGTTTCCATTTGTGGTACTCAAGTGTCTAAATATATTCCTT
CGGTACAAAGTGAAATCTTTATATGGAGCCAGAATAAATTTTCCGATGAA
ACTCTTTCTAACAGTATTTTGAATTTGATCTATTTTTTCTAAAAATAGTC
GATACTCATCTTCTCAAGCTTGCAACTGTTTCTTCCGAAATAATTTAAAG
GAACATCTATATAGAAGATAAAATAAAATAGCTCAGCTAAATCAGCTCGA
GAAGGTTTTAGACGCATTTGAAAATATATTCATAAAAAAAGAATTTTAAA
TTTTCATGATAACAATATTTTTACGATATTCTTAATTTTTTGGCCATTTT
CATCATGGACATTCTTTTTATAAAGTGTATTCTTATAAAAAAAGCGTAGC
TATCTCTAGGAGCACTGTGTGCGTTCAGCATCACATAACCGGTGTTTGTG
ACGACGGGAACCGTCTAGTCTAGAGTAAATTGATTTTTCGAAATAAGTTT
CCATGTCGACTTGCGAGATGTAAAAACTTTCTTGAGGAAGACGCGAATCA
GGGACGGGGGTTTTTTTATGACCAAAAATGTGGCGCAATAGGAAAAACTG
GAGAGGAGAATATTGACAACTGTAGTAAATAGCTAATTTTAGTGAGATTC
CGAGCTTTAAAATGTAGTACAAAAATAAAAACGCTCATAATTAAAACACA
GAAAGAAAAACAGTAGTTTAAAGACCAACTCCCTGTCATCCTCATTCCGA
TTTTAAATCAAATGAAGTCAAATTCTTTCTACATCGGAAAAAATATTGAT
ATTTAGTCGGGAAGTGAATTATATGCATATTAAGCTTAGGCCAGTTCAAT
TGAGAAAAATCCTATAAAAGCGCGAAATTAGGTTTCCACAGAGCAAACTG
GTTCAGCCATCTTTCAAATGAAAATTTCTTCCCTAGAATGGTATTCGCAG
CTTGCGATATAATCTGTGATGCCGTGCATCTGATTAATTTCTTTACAATT
CTTTAGAGATGATGTTTGATGTTCTTTATACATGATAAACGTTCACAATT
AATAATCGTCAGGTAAACTTAAACTTACTCTCTGGACTCTTTTGCAGGCT
TTGCTGTACAATGATCGCTCGGTGCTAGAAAGTCATCATGCAGCTGCATC
TTGGTCGCTCCTTGTCACCAATCCAGGGTTGAATTTCTTGTCCACACTCG
ATTCTGCTGATTTCAAACGATTCAGATTCATAGTTATCGAAGAAATTTTA
TCGACAGATTTGAAAAAACATTTTGATTTCCTTACAGAATGGAACGCCAA
GGTATTAAAAGGGATATTAATTATGATAAGTATTACACGTTTTTTATATT
TAAGTTCAACAATGGAGAAGCTTATTCAGACTCAAATCTCAAGCATTGTC
TTACTAAATTCTTAACCTCAGTTCATTAAATTTATATCATCAAAACTCGC
AAGAACAAAAATGAGTTAAGACGAGTGCTTCTAATTATTCGGCCATCTTT
GGAACTCAACAACGTCTTCTACAAATTCATTTTTGATCTTGCTTTTATTT
CTTATAGATTTCAGACCAGGGAGGCGGTTTGAATTTCTCGAGTGAAGCTG
ACCGCTTACTTCTCGGACAGATGGCCATTAAAATAGCGGACATTTCAGGA
CCGAGCAAAGAATGGGACCTTCACTATAGATGGACTGAACGTATTATTGA
AGAGTTCTACCAGCAGGTTTGTTTGAGTAATCTTCTCATCTCGTCTTTTA
ACGTCCAATCAGCTTAAGAAGCGTAGTGGTGTGGTGGTCATTGCGCTTGA
CTCCCATCTAGAAGGTCCGAGTTCGATTCCCACTGTGGTACTGGCAAGTG
AACACACCTTCTCCCGGGTTAACCCATACAATGTGAGGGGAATTGGGTAC
CACTAGTTCGATACAATACTGTGGATGATATACTAGACATTATGATGTGT
GGTGTCACTCATCCCGTTCTACGCCTGACATCACTATGCATCATGGTATC
AGTGTCTTGCGTGCACAGAACCAGCGGTGTCTAGACAGCGCTACGCATTC
CTACTTCATAAGGAGTAGGACCCATTCCCCAATGGAGAGGGCTCATATTA
TATCTTAAGAAATGATGTCTTTTGTCTCGGTGATGAAAAGGTTTATTACT
TTTCGGGTCCTGGTGGGCTCTAGATCGTTTAGGCTCAACTCCTTTTCTCT
TGCCTTTCTTAGTTATGCCATGCGTTTTGACACAATCGTTTTATTTATGA
GAAGTTCTCTAAGTAACGAATTGACTTAATTCTTGAATATCGCCTTCAGG
GTGAAGACGAGATGACATTGGGAATGCCAACGTCAGCATATATGGATCGC
AGCAGTCCGCAGGTGCCACAACTCCAGGCCTCTTTCATCAAACATTTAGT
GCAACCGCTATACATCGCCTATGAGAAAGCCGGTATCCTGCCTGGTGAAT
GGGTCGAAATCGAGGATGGAGATGAGGAAGAGGATGATGATAGTGAGTCT
GATGCTAGTGGCGAGGAAGGAGACCAGCCCCCGAAGGAAAGCGACAAGAC
CAAGTTTACTATGAACGGGCCTACCTCCACACAAGCCGTAGAAGCAGAAG
AAGATTCTACCAAGGATGAATCAACAGAGGAAATAGATTCTTCAACGGAA
GATGCGGACGGTGACAAGAAAGCCATCTTTTGCGTTATGTCGGATAACAT
CAAACGAAATTATGAGAAATGGTTACGTATCATTGAAGAAGAAAAAGAAG
AGAACGGCGAAAATGGAGAAGAAGAACCTGAAAATGACGACACTTGA Coding sequence (CDS) from alignment at sc0000028_pilon:1529950..1533796- >XLOC_043727 ID=XLOC_043727|Name=XLOC_043727|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1896bp|location=Sequence derived from alignment at sc0000028_pilon:1529950..1533796- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGCTTTATGTGGCGGCAGCTATGCACGATTTTGATCACCCTGGACG
AACGAATGCTTTCTTGGTTGCTACCCTCAATTCCAAGATGGCGCTTTATG
TGGCGGCAGCTATGCACGATTTTGATCACCCTGGACGAACGAATGCTTTC
TTGGTTGCTACCCTCAATTCCAAGGCTTTGCTGTACAATGATCGCTCGGT
GCTAGAAAGTCATCATGCAGCTGCATCTTGGTCGCTCCTTGTCACCAATC
CAGGGTTGAATTTCTTGTCCACACTCGATTCTGCTGATTTCAAACGATTC
AGATTCATAGTTATCGAAGAAATTTTATCGACAGATTTGAAAAAACATTT
TGATTTCCTTACAGAATGGAACGCCAAGGCTTTGCTGTACAATGATCGCT
CGGTGCTAGAAAGTCATCATGCAGCTGCATCTTGGTCGCTCCTTGTCACC
AATCCAGGGTTGAATTTCTTGTCCACACTCGATTCTGCTGATTTCAAACG
ATTCAGATTCATAGTTATCGAAGAAATTTTATCGACAGATTTGAAAAAAC
ATTTTGATTTCCTTACAGAATGGAACGCCAAGATTTCAGACCAGGGAGGC
GGTTTGAATTTCTCGAGTGAAGCTGACCGCTTACTTCTCGGACAGATGGC
CATTAAAATAGCGGACATTTCAGGACCGAGCAAAGAATGGGACCTTCACT
ATAGATGGACTGAACGTATTATTGAAGAGTTCTACCAGCAGATTTCAGAC
CAGGGAGGCGGTTTGAATTTCTCGAGTGAAGCTGACCGCTTACTTCTCGG
ACAGATGGCCATTAAAATAGCGGACATTTCAGGACCGAGCAAAGAATGGG
ACCTTCACTATAGATGGACTGAACGTATTATTGAAGAGTTCTACCAGCAG
GGTGAAGACGAGATGACATTGGGAATGCCAACGTCAGCATATATGGATCG
CAGCAGTCCGCAGGTGCCACAACTCCAGGCCTCTTTCATCAAACATTTAG
TGCAACCGCTATACATCGCCTATGAGAAAGCCGGTATCCTGCCTGGTGAA
TGGGTCGAAATCGAGGATGGAGATGAGGAAGAGGATGATGATAGTGAGTC
TGATGCTAGTGGCGAGGAAGGAGACCAGCCCCCGAAGGAAAGCGACAAGA
CCAAGTTTACTATGAACGGGCCTACCTCCACACAAGCCGTAGAAGCAGAA
GAAGATTCTACCAAGGATGAATCAACAGAGGAAATAGATTCTTCAACGGA
AGATGCGGACGGTGACAAGAAAGCCATCTTTTGCGTTATGTCGGATAACA
TCAAACGAAATTATGAGAAATGGTTACGTATCATTGAAGAAGAAAAAGAA
GAGAACGGCGAAAATGGAGAAGAAGAACCTGAAAATGACGACACTTGAGG
TGAAGACGAGATGACATTGGGAATGCCAACGTCAGCATATATGGATCGCA
GCAGTCCGCAGGTGCCACAACTCCAGGCCTCTTTCATCAAACATTTAGTG
CAACCGCTATACATCGCCTATGAGAAAGCCGGTATCCTGCCTGGTGAATG
GGTCGAAATCGAGGATGGAGATGAGGAAGAGGATGATGATAGTGAGTCTG
ATGCTAGTGGCGAGGAAGGAGACCAGCCCCCGAAGGAAAGCGACAAGACC
AAGTTTACTATGAACGGGCCTACCTCCACACAAGCCGTAGAAGCAGAAGA
AGATTCTACCAAGGATGAATCAACAGAGGAAATAGATTCTTCAACGGAAG
ATGCGGACGGTGACAAGAAAGCCATCTTTTGCGTTATGTCGGATAACATC
AAACGAAATTATGAGAAATGGTTACGTATCATTGAAGAAGAAAAAGAAGA
GAACGGCGAAAATGGAGAAGAAGAACCTGAAAATGACGACACTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028_pilon | genome | sc0000028_pilon:1529950..1533796 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 634-945:313 |
| Aaloc | 451-633:499 |
| Aaloc | 292-450:1241 |
| Aaloc | 88-291:1701 |
| Aaloc | 1-87:3848 |
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