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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000028_pilon:1699041..1703216- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043723 ID=XLOC_043723|Name=XLOC_043723|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4176bp|location=Sequence derived from alignment at sc0000028_pilon:1699041..1703216- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCACTTTTCATGGGTTTTAATCGCCTGTTTTATATTTTTGGAATTGCA
CCAAAACGAGGTCGATGCTCATTGGTTTCGAAACATCAAGCGTAAGATCC
GCATCCGGCCGAAAGTTCCCTTCGTGCGTGGTAAGTAATGCCTTGTATCA
TATCCATCTCCCTTGCTTTGACCTAAAAGAATAAAGGAGAATGGGAATCC
ATATCTTAACTTATAACCTTCTCCTCCTAGGTCGAGCTGACCGTTCCTTT
CTTCTTCGATTCGGTATTCCTATTCCAACGATTAAACCATTTTTACGGCA
CCTCCCTTCTAGGCTACACGCATCCCTTCGTTTGTATATGAGATCTCTCT
AAATTTCATTAAATCTGAATCAAAATTTTGAATGGCTCTAGGAAAATACA
ATCATTGGATTTCTGAACCTTCAAATTTGTGATTTCTTAAAAATTTACTT
GTCTTATAGGAAGTTTATGTCGCATGCGCCATCATCGAACGATAGTGGAT
GAGAACAATCGTTATGTGAAATGTGTACGCAGTTGCCCAAGTACTGGATA
CCAAGAACTATATTCCGTTCGATGGGGACATTACTGTAAACCTGTCGGTC
AGTTGCCAACAATTCACTTTTGAAAGAACACTTATGCGAGGTTTTATTTA
CGTTGATGAACATCATCAGTATACAGCCAAAAGCTAATAATACGCCGGGA
GCGTGTCTCATACTTAAACTGATTTTATAAATTTCATCATTATTGATAAT
TACTGCCGTTAACACATTAAAGCTTGAATCGAGCTCAAGCCTTCCCATAG
CTAAAATGACATCCCTTTTAACAGAACCACAGTTTATATGAAAAGCAGGA
TATCTTCAGATCTTTCTAGAAGCTTAAGCCTCCCAATGCTACCCGAAGAT
CTTTTAGTAAAACAATAAGGTCTAGACCGTTCGCCTAGTGAAAGTAAGCT
GATTTACTATTCATTTTTCCTTACAGTGATTCCAAAGGGTTGTTCAGATC
AATATTGCAACACATGCATCGCATCATATAAATGGATATTCGATGCTACC
CGATATCGTTCAAAATGTGTCCGGAAATGTCCGAGTGGTTATCGAGAACG
CATGCCTAGATGCGAGAGTAAGTAACTAGGAGTCTATAGTATATAGTTGT
TGGATAGTTTGCGATCTAAAGACAGCATGGGTTATAAAGGTTTGAGTAAA
TCTTAAGAGAAAACCTTACACTTTTCTTTGAAGGGCTAAAGGTCGATAGT
CACAATACTACCTCCCCTCAAATAACTACTTGAGTTTGATCTAATTCTTA
GAATGCTTGGTCAATAATTGCCAACGCTGCGAAAACGATTTGTGGAGATG
TAGCAAGTGTAAATGGGGTCTTGCATTACAAAGGACATACATGGGATCTA
CACTCTGTCTACGAAGATGTAGTCGGGGTTTTGAGAAGAAAAACGTAGAT
GGGGTAGTGCGATGCTCGAGACCTATTGTACCGACACCACCTCTCCCCAC
AACCGACATAACGACCGACATGTCGACAACAGAAGAGACATCAACAACAG
ATGTTCCGACACAACAACCTGATACAACAAACATAATTACAAGCTCAGAA
ACACCGACGACACAGACGACAACCACTACAACAGCAACGACTACTACAAC
AACACCACAGCCTACCACAACAACACCACAGCCTACCACAACTACAACAG
GTATCTCCTTTGAAAATAATTGACATACTTGCCCTCAGCAGTTTCCGTAT
AGAAAAATAATAATATTTATTAGGCTTTACTCATCCCAGTATTTGATATT
TTTTCTGAAATTGCAAGCTTTCACGCATTTTTGTCTCGAAATTTACGGTA
TTTTCAAAAGTAGGGGAATTTTTTTCGGTAATATTTTTAGAAAATTGAAA
AATTGCAAATCAAATCTTTTTTTTAGCAAAACCACCACCAAAAGGTTGCG
AGGATACTTTTTGCACAATGTGTTCAGAAGGTTACCGGAAACTTGTCTTA
CCTTTTGGTAACAGCACGTGCGTCGAGCGGTGTCCCGTTGGATTTGCAGC
ACAAGGAGTTGTGTGTTTAGGTAAGAATATTTTTCCGATCTCATCTGGCG
TCAGCGAATCGTTGAATGTTACCTGATATTGAAAAGGAAAACATAATTAT
ATATTACAATATCCCTTATCTAAGTACACACAATGATTTTTGACCTAGAA
TAACACGCATGGTTTTAGTAATGTGTCCAAAAAACATTGAAACTTTGAAC
GAAGAATTTCTAATTGTTTTTTTTTTTTAATCCTTTATGAAATGACAGTT
TGGAGTAATTATCATAAATTATATTTCAATACAGCTTGCTCTGATGCCAG
ATGCGGATCATGTGAGGCTTCAATTTCGGAATGTGAACGTTGTCGACCCG
GTTTCTCTTTAATGTTGGATGCGAAAAATATTTCGACTGAATGCGTTCGA
TACTGTCCGAAAGGCTACACCACAGAAACAATCAATGGAGCACAAGTATG
TACCAAGGAAGAAGAAAGAGGTAAAAATGTTTATTTTTTATGCGGCGGAT
TATCAGGTAGCACGTCACAGTTCCATATGACAGTTTCATTCTATCTAGGA
CGATTTTTCAAAGATTCTACAGCTCAATGTCTTCATAAATTATTGATTGA
TACGAGACCTGATGATCCTTCAACAGAACCAGAACCTATCAGTACTAGAA
TCCTCGCAGATAAACATAATCAAAAGTACTCTTGAATGTAGGATGTGGGA
GAAGTCCACCAAAAGAGCTAAGCTCTGGTTTAGACGGCCCACTTTTAACC
CTGCCTATGTTTCAATTGTTAATTAAGAAAGTTTCTCAACTAGAAAACTA
AATGCTTGCGATCAATTTCGAGTGTTAAACAATACACAGTATGGGAAGTC
TTTTTATAGTCTTTTAATACGTCCCTGCCTGGCTGTCTACCGGTGGAGCT
CGACAATTTTAAATGCTGATAAATTTATTTTCGAATTTCCAAATAAGTAC
GAAACTTCAGGGTATTCTACCCTTCCTTAGAGAAAGTTCCATCTAGTTCC
AACGGGGTCTATAACATGAGGATGTTACCGTACCAAACATAATGTCATAT
ATATCACATTTAACGAATAAATAATCTGATGAAATTTTGTTTTAGAATGT
CCAGTGGCCAACTGTGATCAATGTATAGGCGATTCCCTTGTTCCTCTCAA
CCGTGGATGCTTGAAGTGTAAAAAGGGCTTTACATTGTTCAGAGGGTCAT
TAAGTGACCATTGTTACACTGTGTGTCCACCAGGACATAACGAAATCACT
GAACCGAAAACCAAATCAGCAATCTGTGAAAGTAAGTTGTTATGATTTGA
TCTTTGTAGATAATCCAGATGTATTTCAGAGTTTACTATGAGATAAAGTT
TAGAAAGACTCCAACGGGAAAACAATAGGGAGGAACGGAATACTAAAGTG
TGGAAGAAGATATTGTAAAAAATCCATGATTTTGAAGGTTTTAGTTTTAC
AAAAGTGATCCCGTTTCATATCAGACACATGTTTCATATAAGGGCAGTTT
TACTCTTTCTAACCAATCTTGCTCCACATCCGTGTCAATTCAATGTGTAA
AAGCTTGTAAATTAAAATTGATGAGTAAGCAAACGATATCACTCTTATTT
AAAAACAAAACCTTTAATAACAAGTTTGAGGATAATTTACAACAATCCTA
CGATTTTCTCACTCAATTTCTCTCTTGTAGAATGTAAAATTCCATTTTGT
AAAATATGCAATCGAGCGGATATATGCGACGCATGCATTGAGCCCATGGT
TTTAGACACAAGTACCAACAGATGTCGTTTCTGTAGAGAATACACAACTT
ACAGTTATGCCACAAGGAAATGTGTACCTGTCGGTGAGTGGAATATTCTC
ATCCCCTATACTAACCAGTACAGTGGAGTTCCACATACCTCTACAACTCG
AATGTCTCCTTTAAACAAATTTTCTAGTCCTATACTGTAATCCCTTCACT
GGACAATGCATTATAAACCCGTATGAAATAGGCGTGGTCATCTTAAATCA
TTTAAAGGCTCCCCGAATCTATAAGCATCATATTCATACCTTTTAGCTTT
TCTTTCAGACACCAATCAACCAGAATCTAACCTGGACAACAATGAGATTG
TTTTCGGTGGTCCGTTGGTTGGGTGA Coding sequence (CDS) from alignment at sc0000028_pilon:1699041..1703216- >XLOC_043723 ID=XLOC_043723|Name=XLOC_043723|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3090bp|location=Sequence derived from alignment at sc0000028_pilon:1699041..1703216- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCACTTTTCATGGGTTTTAATCGCCTGTTTTATATTTTTGGAATTGCA
CCAAAACGAGGTCGATGCTCATTGGTTTCGAAACATCAAGCGTAAGATCC
GCATCCGGCCGAAAGTTCCCTTCGTGCGTGATGCACTTTTCATGGGTTTT
AATCGCCTGTTTTATATTTTTGGAATTGCACCAAAACGAGGTCGATGCTC
ATTGGTTTCGAAACATCAAGCGTAAGATCCGCATCCGGCCGAAAGTTCCC
TTCGTGCGTGGAAGTTTATGTCGCATGCGCCATCATCGAACGATAGTGGA
TGAGAACAATCGTTATGTGAAATGTGTACGCAGTTGCCCAAGTACTGGAT
ACCAAGAACTATATTCCGTTCGATGGGGACATTACTGTAAACCTGTCGGA
AGTTTATGTCGCATGCGCCATCATCGAACGATAGTGGATGAGAACAATCG
TTATGTGAAATGTGTACGCAGTTGCCCAAGTACTGGATACCAAGAACTAT
ATTCCGTTCGATGGGGACATTACTGTAAACCTGTCGTGATTCCAAAGGGT
TGTTCAGATCAATATTGCAACACATGCATCGCATCATATAAATGGATATT
CGATGCTACCCGATATCGTTCAAAATGTGTCCGGAAATGTCCGAGTGGTT
ATCGAGAACGCATGCCTAGATGCGAGATGATTCCAAAGGGTTGTTCAGAT
CAATATTGCAACACATGCATCGCATCATATAAATGGATATTCGATGCTAC
CCGATATCGTTCAAAATGTGTCCGGAAATGTCCGAGTGGTTATCGAGAAC
GCATGCCTAGATGCGAGAAATGCTTGGTCAATAATTGCCAACGCTGCGAA
AACGATTTGTGGAGATGTAGCAAGTGTAAATGGGGTCTTGCATTACAAAG
GACATACATGGGATCTACACTCTGTCTACGAAGATGTAGTCGGGGTTTTG
AGAAGAAAAACGTAGATGGGGTAGTGCGATGCTCGAGACCTATTGTACCG
ACACCACCTCTCCCCACAACCGACATAACGACCGACATGTCGACAACAGA
AGAGACATCAACAACAGATGTTCCGACACAACAACCTGATACAACAAACA
TAATTACAAGCTCAGAAACACCGACGACACAGACGACAACCACTACAACA
GCAACGACTACTACAACAACACCACAGCCTACCACAACAACACCACAGCC
TACCACAACTACAACAGAATGCTTGGTCAATAATTGCCAACGCTGCGAAA
ACGATTTGTGGAGATGTAGCAAGTGTAAATGGGGTCTTGCATTACAAAGG
ACATACATGGGATCTACACTCTGTCTACGAAGATGTAGTCGGGGTTTTGA
GAAGAAAAACGTAGATGGGGTAGTGCGATGCTCGAGACCTATTGTACCGA
CACCACCTCTCCCCACAACCGACATAACGACCGACATGTCGACAACAGAA
GAGACATCAACAACAGATGTTCCGACACAACAACCTGATACAACAAACAT
AATTACAAGCTCAGAAACACCGACGACACAGACGACAACCACTACAACAG
CAACGACTACTACAACAACACCACAGCCTACCACAACAACACCACAGCCT
ACCACAACTACAACAGCAAAACCACCACCAAAAGGTTGCGAGGATACTTT
TTGCACAATGTGTTCAGAAGGTTACCGGAAACTTGTCTTACCTTTTGGTA
ACAGCACGTGCGTCGAGCGGTGTCCCGTTGGATTTGCAGCACAAGGAGTT
GTGTGTTTAGCAAAACCACCACCAAAAGGTTGCGAGGATACTTTTTGCAC
AATGTGTTCAGAAGGTTACCGGAAACTTGTCTTACCTTTTGGTAACAGCA
CGTGCGTCGAGCGGTGTCCCGTTGGATTTGCAGCACAAGGAGTTGTGTGT
TTAGCTTGCTCTGATGCCAGATGCGGATCATGTGAGGCTTCAATTTCGGA
ATGTGAACGTTGTCGACCCGGTTTCTCTTTAATGTTGGATGCGAAAAATA
TTTCGACTGAATGCGTTCGATACTGTCCGAAAGGCTACACCACAGAAACA
ATCAATGGAGCACAAGTATGTACCAAGGAAGAAGAAAGAGCTTGCTCTGA
TGCCAGATGCGGATCATGTGAGGCTTCAATTTCGGAATGTGAACGTTGTC
GACCCGGTTTCTCTTTAATGTTGGATGCGAAAAATATTTCGACTGAATGC
GTTCGATACTGTCCGAAAGGCTACACCACAGAAACAATCAATGGAGCACA
AGTATGTACCAAGGAAGAAGAAAGAGAATGTCCAGTGGCCAACTGTGATC
AATGTATAGGCGATTCCCTTGTTCCTCTCAACCGTGGATGCTTGAAGTGT
AAAAAGGGCTTTACATTGTTCAGAGGGTCATTAAGTGACCATTGTTACAC
TGTGTGTCCACCAGGACATAACGAAATCACTGAACCGAAAACCAAATCAG
CAATCTGTGAAAAATGTCCAGTGGCCAACTGTGATCAATGTATAGGCGAT
TCCCTTGTTCCTCTCAACCGTGGATGCTTGAAGTGTAAAAAGGGCTTTAC
ATTGTTCAGAGGGTCATTAAGTGACCATTGTTACACTGTGTGTCCACCAG
GACATAACGAAATCACTGAACCGAAAACCAAATCAGCAATCTGTGAAAAA
TGTAAAATTCCATTTTGTAAAATATGCAATCGAGCGGATATATGCGACGC
ATGCATTGAGCCCATGGTTTTAGACACAAGTACCAACAGATGTCGTTTCT
GTAGAGAATACACAACTTACAGTTATGCCACAAGGAAATGTGTACCTGTC
GAATGTAAAATTCCATTTTGTAAAATATGCAATCGAGCGGATATATGCGA
CGCATGCATTGAGCCCATGGTTTTAGACACAAGTACCAACAGATGTCGTT
TCTGTAGAGAATACACAACTTACAGTTATGCCACAAGGAAATGTGTACCT
GTCGACACCAATCAACCAGAATCTAACCTGGACAACAATGAGATTGTTTT
CGGTGGTCCGTTGGTTGGGTGAACACCAATCAACCAGAATCTAACCTGGA
CAACAATGAGATTGTTTTCGGTGGTCCGTTGGTTGGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028_pilon | genome | sc0000028_pilon:1699041..1703216 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1480-1545:67 |
| Aaloc | 1327-1476:445 |
| Aaloc | 1141-1323:1030 |
| Aaloc | 955-1137:1841 |
| Aaloc | 811-951:2249 |
| Aaloc | 412-807:2874 |
| Aaloc | 271-408:3199 |
| Aaloc | 133-267:3716 |
| Aaloc | 1-129:4177 |
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