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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000028_pilon:1778233..1780781- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043720 ID=XLOC_043720|Name=XLOC_043720|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2549bp|location=Sequence derived from alignment at sc0000028_pilon:1778233..1780781- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAACTTACCCAGATTTATATAGAAGTTCATGGAGATGTGCTGCTGA
TATTGTTAAAAAACAAGGATTCATGAGATTTTATGCTGGCGCTGTACCGG
CAGCTGCCGCAAACATAGCCGAAACATCGGTGCTGTTCTTGTGTTACGGG
CAATGTCGGAAAGTTGTTGCATGGTGTTCAGGGACACCACTGGAAAATAT
GGGAACAGTTCATAATGCGCTCTCTGGTTCTTTTGCTGCTTTCTTTGCCG
CTTTTTCGCTCTGTCCACTAGAACTGATCAAATGTCGAATGCAAACATTA
ATGGAGAACCAAGGGACTTTCAAAAACATGTAAGTTTTTAAGAAAACTCT
GATTCAGTTATTTCTGTCGATTTCTCAATTGTTACTTTTTTAGTTTTCTT
TTTTTAGACAGATAGACAACCTAAATCAACTGATCTGAGTTTAGGATCCA
AAAAAGGGAGGTTTCCTTTCCTAACTTAATGCTTCTGCAATGATATTTAG
CCATGCTATCAAGATATATATCAAGCTATATATAAAATGGCATTAAAAAA
GAGCATAAACAATTTATACTATAGATGATAAGAGACAATTCTTTCATTGT
TTTTCATGGAATGATTACATTAGCAGGCAAAAAATATTATGACCTAACAA
AAATCTAATCTCTTCTCATATTCGTTTTCTATTTTTTTTTCAAAGCACGC
CGTTCACTATCATCAAGGACGTATTACGTACTGACGGTTTCTTTGGTTTT
TACCGTGGAATTACGTCTACTGTTTTGAGAGAAGTACCTGGATACTTTTT
CTTCTTTGGTGGGTATGAAGGAACAAAGTACTTACTTTCTCAAGGCAATG
AAGATCAAGAGTTAGGTATGTGAATACATCATCTCTAGAAAAAGGTAGAT
TCTTTTCTTGGTGATAGTGTCTCTGTTTAATCAGTTCCCTCTGGTATTAA
TCGTTATCATACTGTCTTTTGTTCAGTCCTAAAATAGTTCCATGGGTGCA
ATGTACTGAAATTATTCTAGTTTTATCTTCATTTCGCTATATTGCCTGTT
ACAAATGAGTGTCATCTAGACCCTCTTACACAGGTGGTTGATTTCCAGAA
CCATTTGGTCTAGAAAAGTAATATATACTTACATTCTTATTGGACCTGCC
CCGGTGGGGTGGAGGTCCTATAAATTAACCTTTGTCCGTTAGTTCGTCCG
TTCGTTCGTTATTAGCTTTCCTCGTGATTGTCTCATTAGTTTTTTCTGAT
TTTTTGCACAAAGATGTGGAACTATAAAACCTGACGGAGCCCGATTTTCC
AAAAAAAAATTTTTTGCATGAAAGTAGGGTACCATCATAGGTAAAAGATG
GCTCAAGCAGATTTTTTCAAAAAAATTTTGTTGGCTCAAAAAACGCATGT
TTATCTATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGTTAA
ATTACTCAATTTTTTTATGAGCCAAATTACTATTATTAGATAGATGTTTT
TTTGCTCACAAAGTCTTGAATATGAAAGAATACTTCAAGAGCATGAAATT
TTGACGTTTCTAAAACGTTTTTTTTAATAAGAAACAAACGACTAATTTTA
AAAGATCGTCACTATTTGTGTTCTGAATGATTGTTTAATGGTCACGCTGA
CGTAGATATCAATTATATATGTGTTGAATGCATAACCAGGTAGGTCCACT
TGTTATTTTACGATCCAGGTCTTGGAAAAACCATCATTGCTGGTGGAGTG
GGTGGTGTTTCCATATGGGCTGCCATTTATCCATTCGATATAATCAAATC
AAGAATGCAGGTATAGTTTTCTACGATTTTTTTTTAAGTTTCGAGTAATT
CGATTGTCTGGTTATTTAGTAATTCACTCACTCTTTTACTCACTCTCAAA
CAATTACAGTGGAGTCATCGTAACTCGAATCTCTCTTTAACTCGAACAAG
TTTTCTAGTTCCTTCAGTTAACAACGCCCTTAATAACCTTTCTCCATAAC
TCGAAATTAATCTAACTAAGAACAAATTTGTGTTCCCCGTACGTCTCAAG
TTATGGAAATTAATTACGCTGTATTTTCACTTGAAATATTTGGGACGACA
TTGGAAACAATGAAACAATTTTGAAGACGAATCTGCCATTTGACCTACTT
ATCAAGTATAACAATATCTTACCTCGAAATTTCATCTTTGGGGAAAAAAG
ACTCGACCTGCCCTTCCCCTCGCTAGAATTAGTTTACGTCAGAATAATTG
CACACACTGTTAAAATTTGCCGAAAAAGATTGTTCCCCCAGGCAGGGGTT
AAAATGTTGTTCTTTTTATTAACGATAAGATGTCCTACAATTAGTTTTTC
TCATTCCCAGGTTTATTCAAGCGGTGGAGGAGCCGGTATTAGTTTAATGG
AGACATCTCGTCTGTTGATGAAAGAAGGTGGTGTGCGGGCATTCTACAGT
GGCGTTGGACCAACGTTGTGTCGAGCGTTCCCTGCATGCGCTGCTCTGTT
TGTAGGTTACGAATATTCCAAATCATTTCTTACAAAAGTGACTAGTTAG Coding sequence (CDS) from alignment at sc0000028_pilon:1778233..1780781- >XLOC_043720 ID=XLOC_043720|Name=XLOC_043720|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1560bp|location=Sequence derived from alignment at sc0000028_pilon:1778233..1780781- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAACTTACCCAGATTTATATAGAAGTTCATGGAGATGTGCTGCTGA
TATTGTTAAAAAACAAGGATTCATGAGATTTTATGCTGGCGCTGTACCGG
CAGCTGCCGCAAACATAGCCGAAACATCGGTGCTGTTCTTGTGTTACGGG
CAATGTCGGAAAGTTGTTGCATGGTGTTCAGGGACACCACTGGAAAATAT
GGGAACAGTTCATAATGCGCTCTCTGGTTCTTTTGCTGCTTTCTTTGCCG
CTTTTTCGCTCTGTCCACTAGAACTGATCAAATGTCGAATGCAAACATTA
ATGGAGAACCAAGGGACTTTCAAAAACATATGCAAACTTACCCAGATTTA
TATAGAAGTTCATGGAGATGTGCTGCTGATATTGTTAAAAAACAAGGATT
CATGAGATTTTATGCTGGCGCTGTACCGGCAGCTGCCGCAAACATAGCCG
AAACATCGGTGCTGTTCTTGTGTTACGGGCAATGTCGGAAAGTTGTTGCA
TGGTGTTCAGGGACACCACTGGAAAATATGGGAACAGTTCATAATGCGCT
CTCTGGTTCTTTTGCTGCTTTCTTTGCCGCTTTTTCGCTCTGTCCACTAG
AACTGATCAAATGTCGAATGCAAACATTAATGGAGAACCAAGGGACTTTC
AAAAACATCACGCCGTTCACTATCATCAAGGACGTATTACGTACTGACGG
TTTCTTTGGTTTTTACCGTGGAATTACGTCTACTGTTTTGAGAGAAGTAC
CTGGATACTTTTTCTTCTTTGGTGGGTATGAAGGAACAAAGTACTTACTT
TCTCAAGGCAATGAAGATCAAGAGTTAGCACGCCGTTCACTATCATCAAG
GACGTATTACGTACTGACGGTTTCTTTGGTTTTTACCGTGGAATTACGTC
TACTGTTTTGAGAGAAGTACCTGGATACTTTTTCTTCTTTGGTGGGTATG
AAGGAACAAAGTACTTACTTTCTCAAGGCAATGAAGATCAAGAGTTAGGT
CTTGGAAAAACCATCATTGCTGGTGGAGTGGGTGGTGTTTCCATATGGGC
TGCCATTTATCCATTCGATATAATCAAATCAAGAATGCAGGTCTTGGAAA
AACCATCATTGCTGGTGGAGTGGGTGGTGTTTCCATATGGGCTGCCATTT
ATCCATTCGATATAATCAAATCAAGAATGCAGGTTTATTCAAGCGGTGGA
GGAGCCGGTATTAGTTTAATGGAGACATCTCGTCTGTTGATGAAAGAAGG
TGGTGTGCGGGCATTCTACAGTGGCGTTGGACCAACGTTGTGTCGAGCGT
TCCCTGCATGCGCTGCTCTGTTTGTAGGTTACGAATATTCCAAATCATTT
CTTACAAAAGTGACTAGTTAGGTTTATTCAAGCGGTGGAGGAGCCGGTAT
TAGTTTAATGGAGACATCTCGTCTGTTGATGAAAGAAGGTGGTGTGCGGG
CATTCTACAGTGGCGTTGGACCAACGTTGTGTCGAGCGTTCCCTGCATGC
GCTGCTCTGTTTGTAGGTTACGAATATTCCAAATCATTTCTTACAAAAGT
GACTAGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028_pilon | genome | sc0000028_pilon:1778233..1780781 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 592-780:190 |
| Aaloc | 502-591:830 |
| Aaloc | 331-498:1854 |
| Aaloc | 1-327:2550 |
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