|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:180116..182844+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043717 ID=XLOC_043717|Name=XLOC_043717|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2729bp|location=Sequence derived from alignment at sc0000083_pilon:180116..182844+ (Clytia hemisphaerica_ch_hm2_pilon)
TATGCGGGACGCAATCAAGAAGAGCTTGAACAGATCAAAAACATGCAGTT
GTTTTATGTGGATGGAAAATCGAAAGCTGGGCGACCAGTGTTTTATTATA
TCGCACGAAAATATATGTAAGAACTGACATTGTATTTCGATAGGTCATCC
GTTTAAGCAGCTCGCATAGTTGTGTGTTGCTCATTGCTCTTTACTCCCAT
CCGGTGTCGCGGTAAATTACGACcttggaatttaatttttttaccgGGAA
ATGAAGACTTTTCGGGTTTTAATCACTCAGGATATTATAATTTAAGTGGG
AAATTAAGACTccataaaaaaacaataaaaagtgtcaaattttcttttct
ttgtataCAGAGttaattgtttattttctttgtaagaactaTTATCGTTA
AAAGGCTGCGAcccaaaatgtaggtttttGGATTGTACGAAAAGatatgg
aaaataatttttcgactAAATgcttttatatatatttatcgtttgcttac
tcatcaattttaattcacaagctttttcacattggattgacatggatgtg
gaccaagattggtcagaaagaggaaaagaaaaatggtttttatgcttata
tcagcatataaaacctttaatgatTCCAACTTTCTTTATTTCTGGACAGT
AACGATCAAGTTTCGGACGAGATGCTTTTATACCACATGTTGTTGACATT
ACAATCGAAACGGAATCAAATCTGGGAGCTGGTGGTCGATTTTACACATT
CTTCTGAACAAAATTGGttcaaggtaaaaaataatGGTGTTGAACTGAAT
CCTTAAATTTATTTTGTGTTATGAACCTAGACATTAGTGTTATTTATACT
GAGACGAGCAATTCGTCTGAGACGAAcaatttagaaaatgagcattatgg
aggagtgtactttccattcctgtttcaataaataggatctccacagatca
cattttacaaactactcgtATCAGACGATTTtttcgtctcagtataaatg
gaactacCGGGTACAAATAAGTTGCGCACTTTgcttaacttaaattttgg
tgtattactttttgattttattttattggttcaaaagttatgttcaaaaa
cctaaaatgtcaattttaaaaaatgtcaaaaaaggctaaaaacaagGGTA
TCAATGTAACACtatttatgttttctttatctttattgttaatttcgcct
agcgaaagtattacgatagcctttcgcggcggtgttggtgtcatcggaaa
aaaaattagaaaacgaaagtactcgatacggtggacaaacacactaaatt
taatttgtttttctaccTTTCCTCGGTCACACTCACCATGCATAAATATC
GTggtcgttttttttcaaaaagaaaaataataaatataaaacGTACAACT
TTGAAACAATTCAAATATCATTAATATTATTTGCTCATTTTCATTGTACT
TTAAACAAAcactttattcttttattatttttcttatgaatgttctacac
gttttttttttttttaagaaactagttttaccaagcagcctcaatgtttc
ttaagaaatcagccttttgagccttaaatgtttcttacatgtttccaaac
tttttgacataatcagcctatttttcatgttttgattggaaggttcttaa
aaaaacgaattaaaaatgtcattttttcattttcagcctcagcatgtttc
ttatatgtttcttagtttttaggcattctgagcctcatgtttcttaaaag
tgtgtttcttaaaaaaaaaaaaacgtgtacttgacATGCGTAAATGAAAA
ACAGAGAGTAAGTAGTTATTATGCGTTTAGAATAAAGAAGATTTGGTTGA
GAAGATTCGTCAAATAATATGGACAATATACCTTTCAGATATTAGTTCCT
ACAGAATAATCAAAGGATGGCATAAAATGTGGGAACATTTTATTTGTCAT
ATAGAATTATAAGAATCTTTATAGAAGAatctaatcaataactcttaaac
ggtgatatacctttcggtaattagttcttacagagtaaacaagggatgac
acACAATTTgagcacatttatttttcttataagcatatactttataaaaa
tcaaatcaataacttttgatagctggGGATATACTTttaggtaattagtt
cttacaaggtagACAGGGGACTACTGGTTGCAGCAGTTTTGATATGGCTC
AGCCTCGCTTattcatcataaaaaatgacCGTGTCCGAATCATTTCTCAT
GACTTGacctaaacctttttttctaatcCACCTCGTAATTTTCTTAACAG
CTTTTTCAGAGCCAGCATTTTAGCAtgctttttgcaaatatttggcgaaa
ttttcgacttcaagtcgtcttgttttttttacttctgtttTCCCCTTGGG
CATAAACAAGATTCAGAATGCTTCAAACTCCACAAAATTATCAACATCTT
TCCAAGAGTTTTCGATAGTTTTCTGTGTGTACATCATCGCTGAGAAAGGC
GGAGAAAATATCATTAATGCTTGGACCACATAAGATCATTTCAATAACAA
ACTGTTCACTGTAATCTAATACTCGCGCTATTTTCCTTTAGATCGAGACT
TTGGCAAGGGCGTTCGTCATTCTACCGGAAAGCCAAGTGACTTCACCGCA
AACCATTTATTTTTACAATGTCAATTCTTCAGTCAAACAATATGCTATCC
GCTGTGATCGTATTATGAGGCCTCTAAAG Coding sequence (CDS) from alignment at sc0000083_pilon:180116..182844+ >XLOC_043717 ID=XLOC_043717|Name=XLOC_043717|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=756bp|location=Sequence derived from alignment at sc0000083_pilon:180116..182844+ (Clytia hemisphaerica_ch_hm2_pilon)
TATGCGGGACGCAATCAAGAAGAGCTTGAACAGATCAAAAACATGCAGTT
GTTTTATGTGGATGGAAAATCGAAAGCTGGGCGACCAGTGTTTTATTATA
TCGCACGAAAATATATTATGCGGGACGCAATCAAGAAGAGCTTGAACAGA
TCAAAAACATGCAGTTGTTTTATGTGGATGGAAAATCGAAAGCTGGGCGA
CCAGTGTTTTATTATATCGCACGAAAATATATTAACGATCAAGTTTCGGA
CGAGATGCTTTTATACCACATGTTGTTGACATTACAATCGAAACGGAATC
AAATCTGGGAGCTGGTGGTCGATTTTACACATTCTTCTGAACAAAATTGG
ttcaagTAACGATCAAGTTTCGGACGAGATGCTTTTATACCACATGTTGT
TGACATTACAATCGAAACGGAATCAAATCTGGGAGCTGGTGGTCGATTTT
ACACATTCTTCTGAACAAAATTGGttcaagATCGAGACTTTGGCAAGGGC
GTTCGTCATTCTACCGGAAAGCCAAGTGACTTCACCGCAAACCATTTATT
TTTACAATGTCAATTCTTCAGTCAAACAATATGCTATCCGCTGTGATCGT
ATTATGAGGCCTCTAAAGATCGAGACTTTGGCAAGGGCGTTCGTCATTCT
ACCGGAAAGCCAAGTGACTTCACCGCAAACCATTTATTTTTACAATGTCA
ATTCTTCAGTCAAACAATATGCTATCCGCTGTGATCGTATTATGAGGCCT
CTAAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:180116..182844 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 307-444:2592 |
| Aaloc | 184-306:651 |
| Aaloc | 67-180:1 |
|
