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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:188310..195607+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043716 ID=XLOC_043716|Name=XLOC_043716|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7298bp|location=Sequence derived from alignment at sc0000083_pilon:188310..195607+ (Clytia hemisphaerica_ch_hm2_pilon)
CAACTGGCATTGCGTGAACCCAACATGACTTTAGAGGTACCTGTAATTTT
AAGTAAAGTGCAGtgtctttaactcgaacctctttaacTGAATGTCTCCT
TagctcgtcccttcagttaacaatgccttataaaccttactccacaACTC
CAAAttcccttaactcgaacaaatttgtgttccacattcgagttatagag
acgtCACTGTAACTTGATaattctttttcagaaaatgcagtAATCTAAAC
TTTTTTATCTTTGGAAAGCTCACTTGCAATTTTACCTTACAGGCCTTCTG
ATTGGTGCTCgagtgtttatttttatttaaaaaaacttagtcCAACTCTC
tatcttttttcagtttttagaCGAATGCATCAGCTGTTTCGCCAAATCTA
ACGACGAGTCACGGAATTTGTGTCTAAATTATATGGCTCCATGGTTCCCT
AATCTTGCAAGGTTtgaatttcattcattttattacAAAAACCATTAGAG
AGGATGGGCAATGGTGAAAGGATCAATATTTACGCAGACTAAGTTTCGAC
CACGAGCGGTATTCCGATCAAAAGGTTGCGGGTttgaaccattgagttta
aagcccgaagggctagagttcaatctctaacctttctcaggcaagaaaaa
gtgaagccttaaaaaatgcgccgctttttttgacgacagattgaatctat
taattcctttgtttacgattgatatttttttcgaaatttagcggtaaatt
ttagtttcaatctttcatttgtgtaaaaaccaggcgagccgctcaaggcc
gcgcaactttggtaggatttgttggcttcaaatcctaccaaggagattga
cttctagcccttcgggcttatacttcattggtttgaACCCGGCTCAAATC
GACCGCTTATAGCGACACCATCTTTTTTAACGTTGGTAATTGCCATTAAG
ACTCtagaaatatgttttttttcaacGAGACTTCCTTTATCACTAACCAC
CGCCCATCACCGCCCCAGCCACTATCCTTCAATTACAATTGGTTTATGAT
CTTTTTACAGATATTGTGGTTTATCAAGGAACGATCCAAATAAACTACAA
ATGATGGAGATTGTGAAAAAGTTAATCGATCTTACTATCTCTAATCGTCA
GGTAGGttcgttttcttataaaaacctgGTTTTGTATGACTTTACATAAG
TATTTATTACCTAGAATTTCAAACGAATGTGCAATTTTTAATTGAGACTC
CCAGAGAACCAACAAGGCTGTTATAAACCTAAAACCCcattaatatttaa
aaaatgaaggcGTACTCaatctcgctaattcgaactcgaaaggAAAGGAA
TCAATTTAcgttcaaattacagagagattggaataatagaatttcCAATT
AGCGAGAGTCTATTGTATCTGACAGCTGTTTAGAAGTCATTTAACCAGAA
TTTTCTTGAAGAGATTCAATTATTAATCTTCCCAGTTTGACAAACCCTTT
TATATATAAAACCTTTGTTTTCATTTCAGAACTACCCATTCATACAAGCG
TCAGTGTGGGCGAATATTGGTAAAATACCAGACCTCCTCGACGTTGTGCT
TGACCTTTTTATGAAggtaaagggctacatacactacacaatatattgtc
aggcaatatattgatgatatattgctgaatgtcgacaatatattgaaaag
gtgtccgcaatatattgtcagctcgattggcaatattccaacaataaagg
gggattgtttacagaaagaaaattcctttttataatagagtaccagttgt
ttacttcgtacattacggtccgcaaaccatattgtcgaatattgttcgtc
aatatattgtgtagtctaagtagcccttaaagaagtgttttttttttctc
ttcctGTAGATATCTAGATCTCCTGTGAATTATCGTCGTTTTGCAAAAGA
TTTCCTTTACCGCACTAAGATTCTCTGActtttccgagatttttctACTA
TTTTCCTGGCATAGCTGGCACTAGATTGGAAGGATTTTCTTTTAAAGGTA
CGTTCAGTTCTGATCTTTTTCTGGTAGAAAAGTGGCAGTGATTTAGTGCG
GGAAGGGAATTTTATATAAAACGACGGTAGAGGACTTTTGGAGTATTGTC
ATCGTGttcgtaaataatgttttacctATGGAAACACCCATTGTGTTAAC
CtagagaaaaattatttcaaatttgaacgTGGACGTTTCCGTAAATacca
ttacgtaatgaatatcatgaGTTTCCACCCACTTGCAACTGAGTATTCAC
GATATGCACCAACAagatgtcttccacggacccaacagctgattggttgc
aattTTACGTCACTAACCAATCAACTGTttggtccgtgatgtaatgtcag
aaaacATTGCAACGGTGCATAATTGTCGATATAATCTGGCGACACTTTTC
CCCCTTTATACTCGCGCAAGGGCTGTTTTGACTATAGATAAAAGACCTTC
CAGAGCTATACAAATACAAAGTATATTTCAAAGGtttcaataaatttctt
tggttttttaCACACGACAGACGAGTACAGCCGGAGGATTCAACAGCGAG
AAAGCAGAAGTACTGGCGGATACCAGTGTTACGTTAGCGTCTGCAAATGT
CGCCCACGTATCCAAGAAAATACTCGACAAATTCCATACGGTATGTATCC
GGTATCTATGAATTCTATCTGTGTTCTTTATATGCATCAGTCAAGATGAC
ATCACATTATGTGTCATTACAAGCGATTTGaaatacaaatgaaatggaaT
GGTAGTGAGAAGCTTTTGAATGTTCCTGGATGTTCCAAGGCACTCCTAAA
TCAAGGGAGCAACCAGGGACGCGATACCTTAATATGTTAGTTgtatcata
tttttcaattaaaacaGGTGATTGACCGAACGAGGATATCGCACGTCGAA
AGTTTGGAAAGACATCTGATGTGGGACGATATTGCCATTTTGGCGCGCTA
TTTACTGATGTTATCATTCAACGACTCTTTAGACGGTAAGGTTAAGTAAC
GATAgatacacgtttgtttttttttaagaaactagtttcaccaagcagcc
tcaatgtttcttaagaaatcggccttttgagccttaaatgtttcttacat
gtttctaaactttttgacataatcagcctatttttcatgcaaagattgga
aggttctaaaaaaccgagttaaaaaatgttattttctcattctcagcctc
agcatgtttcttagatgtttcttagtttttaggcattctgagcctcatgt
ttcttaaaagtgtgtttcttaaaaaaaaaaaaaacgtgtaaatcaggacg
acggacgaattttcTCTAGCCATTGCTCACGTCACGGAACTTTTCTTTAA
CCTGAAAGCAAGGCAGACTTGTCATcgcaaaaaaatcaactttgcttCTA
GAACGAATttctgtttgatttttctttaaaaaaacgatCATTATTTTCTT
TAGTATTGCAACATTTGCCAGACATTTTCCACATCGTGACGTTGTTGGTA
TCATCCGGTCCTGTATCATTACGGGCTTCCATCCACGGTCTTGTCATCAA
TTCTTTGCAAAGTTTGTTAACTTGTGAAATGAAATTGAGtggtaagaaca
tccaaaatttttgaagcccttGGATGTTTTCAATGCTCttatttattaat
atttttggtccattttcctaataaatcagattttttagagccctcaaaac
cttaaaatgttcttaacttgttcttaacatattggccatcgaagcctcat
attcttatatagtctgctcttataaaaaacgtgtattaaattATGACGAC
AAAACACAATTAATTCAAgcttattatttattttttagataaaaCTCAAT
TACTGATACGAAAGAAGTTGGAAGACCTTTCATTACAGAAGTTCTACCTT
CTTTTTGGTAAGTAGTACCGCGTTGTGATATctagtaattttttttgtgc
TAAAAACACATTTACCAGACAATTTTAAGACTCGGAAAAATCCAGTTAGG
GACTTACTTCAAGCAAACCTCAAGCAAGCTGTTtgttcctaactgacata
aATTTCACCCACGAAACAAAAAACTATGCGCAGGTCTAAATGAGAACTAC
TTGAAAACTTTGAGTTTTCAAGTTGTTACTAAACCACCCTATACATTACA
TATTCTTTCTAccatttctaataaaaaatggctgatcgtgggtgaaaatg
acgtcaaacGGAATCTGCCTATTGCTCTTCGAAGCCACTAAGGATCAACA
CAGGcaccgggggggtactacccttgtcgaccgacgggggtgctccgctg
aggttcgaaaaatggaccctacgtgggactcgaaatttgcgaaaaaagtg
accctacgtgggactgaaattccaaaattttctcaaattttctacttttc
ccccaaattttccaaaaaaaggcaccctacgagggactgatttttctact
ttggtgtttttgcgaccctacctgggactcgtggaggttaaaaaaggtac
cctgaccagcggagcatccccgtaacccattttgccccagtacccccccc
cccttcccgGACACAGGCATCATTACCATTAATAGCCAATGAATGTTTTC
GCTATTTTTGTAATCATAATTCATAAGAATTACAATGAATCATATTACCA
GTaatttttatctgatattccgatggcaaATTGGTGGCCGCCcgcgctaa
agctctaaaataaGAAGCCAATTTCCCACATTTGGTTGTGAGTTCGATCC
TCGGTTATCGCCAAATCAGTGAGTGAGAAGCTTAGATTGGGTAATGTAAT
CAGGGTTGTAAGTAAATAGAAGATGCGAGTAGGTTTCGCACTCACTCTCC
TTCAGCATTCGACTACTCAAAGTTCTAGCTCGAATAGAAAAAGGGGTACA
CTCCCTCACAGCCGCTGATAATCACCAGATGAATATATagttgacgttct
actattcgatacgctcccttattcgataacattaaaagtcaccgtcaaca
agaaactctcataaacgaaattctactattcgatgcgcTCCTTTATTCGA
CGAAAATtctattccccttgaaaatcgaattcgaGAGCATGAACtgtact
tacttacttacttcaaTATCGAATTATTCACAGGTATTTCGAACGTGAAA
TCGACACCAGTCAAAGCGTTCGTCACGCAAACCAAAGTCAATCGAACATT
TTATTCGAAACTGAAATCAAGAGAAGCTGACACTGAAATCTCCTTATCTT
CGCTGGAAGTCATTGCAGAAACCTTACTGTCAATCGTTGAGGTAATAATA
Cagattttgaagccttaggatgctcttaactttttgagttttaagcccta
aaaatgttcttaacatgttcttattttcatcatttcgcgagtatttttgt
ccatttttctaaaaaattgagtGTTATTAGAGCCAAATGAcgtgtatttt
ttttcaatttaggcTTGTTGCAAAGATTTGAAAAACGAAAACTGGATCGA
CCGATGGACAGCACTTTGTTCAAGGTAACACCACGGAAATTACGTAATCT
TTATTCAGACTCGATAGACCTTTTCATAAATTACATCACGAACATCACTT
GCCTCGTATTCAAACAATTACCATGGTGATTATGTCCCTTTAGACATTAA
ATGATTTTTTTATAAATAGAAAGTAGTCTTAATAAAATCCGCTGTGAGTT
AATCACCTTGGTAATAATTTCAAAACGAGGCAAGTGATGTTCGTGACTTA
ATCTATGAAAAGGCCGATTGCCGGTCTCGAAATAACGGTCAGAGATTGAT
CCTTTTCGACTCAACGAACTCATAATATTCACGCTAAACCAACCCTAAAT
CGGACATTATGTTCTTACCCACTTGAAATTGTTATTTTAGTCACGAGTAG
ACTTTTCTAGAGCAGTCAACTCGAATTTttatgtaattcgaactaaaata
ttgatgCCTTCGGctgaaaagtggtttaaattattCTCTgtgattcgaat
ctttctctaattcgaatagtCGAGAGTCAACtgaacttttttcttcatcc
AGTCACTGTTACGATTACAATCCAGCCATTCAACCACGTTGCAATGTTGT
GTTGGGAGTGATCAGTAAAGAAAGCAAAGAAGATGATATCAACAGGGCAC
TTGATGTTTTGACTAAGGTAAAAATAATATGGTGACCTAGTGGTTTTTTG
GTAAAGGTGTATCTATCTTAAGGAGTGATCAGATGGTTTGAGGTATTTGA
CATGTAGATTCCTTTTATTGTCCTCAGCAGGACCTTAAGATATTTTTGCC
TGATTACTTCCCAAAGTTGAAACAttcaagtttttgactttttagtaAAG
AAAACAATACAATTTCACCTATGCTATTTCTAGCATTCGAATAACTAGTT
TATAACTAATTTAACGTTACATTACTTCGATGCAAGGGAATATTACCTTT
TTACAAGAGCTCTCATACACTATTTTGTTTTCGATAGCGTcgtcgaaaaa
atatatatttatatttttcgtTACCACTGTCCTTAAAAGCTGACCGCGCC
AGTAAGGGCTGATAAGTTTATTGAATTTTAGTTGATTTGGTAATCAAATA
ACCAAACACATATATCCAATAATGGATTTTGATTTTCTAGGCGACTGGTG
TTTATCAAGATTTCAATTTAGCGGAAGCCACGCTGATGTGCTTGGCCAAA
TATCAAGCTCTCCTTAAAAAGGTAAGTTGTGTAAGCCTAGGactgaaaaa
aaacataccacagACCTGGTTGTACCCTCTCCACGCACAAAAGATTTGCC
CAAAAGTTCCTGGTGGGAGAAATACTCTGAAATTGCATCCCAATTAGAAG
CCCTAAGTAGATTTTTTGGCTGTACACAATAGAATTCGAAATCCCCACTC
CTAGCAAGAAGGGATTCAGTTTATCATCACCACTAGCCAGAAATTCTCAA
TTGATCACTGAGACAGTGATGTCAGTACAGATCAGTGTGTTTTATCAAAA
CCAGCAATCATTAAAGTACTCTCGggatacctaatagccgggggggttgg
aataagcGgggggggcttggaaaaaatctcaaaacttaataagcgggggg
ggaaggggtttggaataaaaatgtcctgggtggaaaattttcgaaaaatt
aattagtggggggacggctattaggtacccaagagtacaTGTATCAGATG
TTTTAACTTCCTCTGTTTGTTTTTTAGGATTCGAGTTTCCacaaaata Coding sequence (CDS) from alignment at sc0000083_pilon:188310..195607+ >XLOC_043716 ID=XLOC_043716|Name=XLOC_043716|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2388bp|location=Sequence derived from alignment at sc0000083_pilon:188310..195607+ (Clytia hemisphaerica_ch_hm2_pilon)
CAACTGGCATTGCGTGAACCCAACATGACTTTAGAGCAACTGGCATTGCG
TGAACCCAACATGACTTTAGAGtttttagaCGAATGCATCAGCTGTTTCG
CCAAATCTAACGACGAGTCACGGAATTTGTGTCTAAATTATATGGCTCCA
TGGTTCCCTAATCTTGCAAGtttttagaCGAATGCATCAGCTGTTTCGCC
AAATCTAACGACGAGTCACGGAATTTGTGTCTAAATTATATGGCTCCATG
GTTCCCTAATCTTGCAAGATATTGTGGTTTATCAAGGAACGATCCAAATA
AACTACAAATGATGGAGATTGTGAAAAAGTTAATCGATCTTACTATCTCT
AATCGTCAGATATTGTGGTTTATCAAGGAACGATCCAAATAAACTACAAA
TGATGGAGATTGTGAAAAAGTTAATCGATCTTACTATCTCTAATCGTCAG
AACTACCCATTCATACAAGCGTCAGTGTGGGCGAATATTGGTAAAATACC
AGACCTCCTCGACGTTGTGCTTGACCTTTTTATGAAgAACTACCCATTCA
TACAAGCGTCAGTGTGGGCGAATATTGGTAAAATACCAGACCTCCTCGAC
GTTGTGCTTGACCTTTTTATGAAgACGAGTACAGCCGGAGGATTCAACAG
CGAGAAAGCAGAAGTACTGGCGGATACCAGTGTTACGTTAGCGTCTGCAA
ATGTCGCCCACGTATCCAAGAAAATACTCGACAAATTCCATACGACGAGT
ACAGCCGGAGGATTCAACAGCGAGAAAGCAGAAGTACTGGCGGATACCAG
TGTTACGTTAGCGTCTGCAAATGTCGCCCACGTATCCAAGAAAATACTCG
ACAAATTCCATACGGTGATTGACCGAACGAGGATATCGCACGTCGAAAGT
TTGGAAAGACATCTGATGTGGGACGATATTGCCATTTTGGCGCGCTATTT
ACTGATGTTATCATTCAACGACTCTTTAGACGGTGATTGACCGAACGAGG
ATATCGCACGTCGAAAGTTTGGAAAGACATCTGATGTGGGACGATATTGC
CATTTTGGCGCGCTATTTACTGATGTTATCATTCAACGACTCTTTAGACG
TATTGCAACATTTGCCAGACATTTTCCACATCGTGACGTTGTTGGTATCA
TCCGGTCCTGTATCATTACGGGCTTCCATCCACGGTCTTGTCATCAATTC
TTTGCAAAGTTTGTTAACTTGTGAAATGAAATTGAGtgTATTGCAACATT
TGCCAGACATTTTCCACATCGTGACGTTGTTGGTATCATCCGGTCCTGTA
TCATTACGGGCTTCCATCCACGGTCTTGTCATCAATTCTTTGCAAAGTTT
GTTAACTTGTGAAATGAAATTGAGtgataaaaCTCAATTACTGATACGAA
AGAAGTTGGAAGACCTTTCATTACAGAAGTTCTACCTTCTTTTTGataaa
aCTCAATTACTGATACGAAAGAAGTTGGAAGACCTTTCATTACAGAAGTT
CTACCTTCTTTTTGGTATTTCGAACGTGAAATCGACACCAGTCAAAGCGT
TCGTCACGCAAACCAAAGTCAATCGAACATTTTATTCGAAACTGAAATCA
AGAGAAGCTGACACTGAAATCTCCTTATCTTCGCTGGAAGTCATTGCAGA
AACCTTACTGTCAATCGTTGAGGTATTTCGAACGTGAAATCGACACCAGT
CAAAGCGTTCGTCACGCAAACCAAAGTCAATCGAACATTTTATTCGAAAC
TGAAATCAAGAGAAGCTGACACTGAAATCTCCTTATCTTCGCTGGAAGTC
ATTGCAGAAACCTTACTGTCAATCGTTGAGgcTTGTTGCAAAGATTTGAA
AAACGAAAACTGGATCGACCGATGGACAGCACTTTGTTCAAGgcTTGTTG
CAAAGATTTGAAAAACGAAAACTGGATCGACCGATGGACAGCACTTTGTT
CAAGTCACTGTTACGATTACAATCCAGCCATTCAACCACGTTGCAATGTT
GTGTTGGGAGTGATCAGTAAAGAAAGCAAAGAAGATGATATCAACAGGGC
ACTTGATGTTTTGACTAAGTCACTGTTACGATTACAATCCAGCCATTCAA
CCACGTTGCAATGTTGTGTTGGGAGTGATCAGTAAAGAAAGCAAAGAAGA
TGATATCAACAGGGCACTTGATGTTTTGACTAAGGCGACTGGTGTTTATC
AAGATTTCAATTTAGCGGAAGCCACGCTGATGTGCTTGGCCAAATATCAA
GCTCTCCTTAAAAAGGCGACTGGTGTTTATCAAGATTTCAATTTAGCGGA
AGCCACGCTGATGTGCTTGGCCAAATATCAAGCTCTCCTTAAAAAGGATT
CGAGTTTCCacaaaataGATTCGAGTTTCCacaaaata
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:188310..195607 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1372-1392:7278 |
| Aaloc | 1291-1371:6691 |
| Aaloc | 1177-1290:6104 |
| Aaloc | 1114-1173:5513 |
| Aaloc | 958-1113:5186 |
| Aaloc | 889-954:3891 |
| Aaloc | 751-885:3506 |
| Aaloc | 631-747:2918 |
| Aaloc | 511-630:2571 |
| Aaloc | 424-510:1530 |
| Aaloc | 334-423:1062 |
| Aaloc | 235-330:364 |
| Aaloc | 199-234:1 |
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