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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000056_pilon:1183899..1186784+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043702 ID=XLOC_043702|Name=XLOC_043702|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2886bp|location=Sequence derived from alignment at sc0000056_pilon:1183899..1186784+ (Clytia hemisphaerica_ch_hm2_pilon)
ATggaacttttttgtttcaaaatgatTCTATTGCCGTGTATTCTgctgac
tgttttttttttcggtgaAATGAAAGCGAACACTATAGAAGTGAACCGAA
AAAATGGTTTATCCTTTGGAGATCTTTATGTTCCACCAGGTGGTATTGCA
GAATGCTCAAGATACGGTggtgttgattttttttcgagttCTTGCCAATG
CAAAAATGCGCAAGGGATCTTGGGAACGTTCACAGATCAATGTGACTATG
ACTTGAAAACTAGCTCAGGTATGTATTATTAGTTACACGGACTTCTTGAG
GTAGGGTACGGTATATCGAGTTGttaaaaaccgtattggtggcgaggctt
gccGAGGTTAAGTGGAATTttctaatgaaaataaaggatGTAGAAGTTGC
ACATCTTTGTTGAAACTTTAACGGACTGTGCGATTCTCTTCTCTTCTCAT
GTGTGCATCTGTTACATGCAATTTTCTATTCGATCAAAGGGGGAAAATGC
AAAAGTCctcaatttttattgtttttaaggGTGCGAGTGGCAGATTCATC
AAAGCAATTCACCATTTTACATGGATAGTGCAACTGACATTCTGAATAAA
GTTTTTATTGGCACTGATAAAACAACATTCGTAACAAATTGCAAGGATAT
CGCATACTTAGGAGCTAAGATATGGGAAAATGGGAAATGGAATTCTTTTG
CAGCTGATCAATTTGATAAGGAGAAAATCGGTAATCAATACTTACTGAAG
GTAAGAGCAGAGAGTCACGAATACATCAGCTTGCATAACAGAGCTAAAAG
TTTTATCTTTACATAAGTGTAGTCCCCGTTGCACATCAGagacatatttc
atatcatattgttatattatgctgatataagcaaaataatgttttttctc
tcttttcgaCCAATCTTTCTCCAcatacgtgtcaatccaatgtgaaaaag
cttctGAATCAAAATTGTTAAGTAGGCAAACGATATTACTCTTATTTAAA
GTCAAAATCTTCAACGCTTACTtatttgacgttctactattcaaaacgct
ccattattcgataatattgagaGTCATCATCAACAAGAAAATCTCATAGG
CGACGCTCTCCTATTTCACATGCTTCCTTCTCCGATGAAAATCAAATCGC
TTTGAAAATCAATTCAGAGAGCTTGAAATGTACCACCCTGATTATGActc
aaatttcataaacaatgggccattccattttatgtcAATACATaggggtg
gacgaacttttccagggggtatttggaaaatttccaggggttccTGTAAA
ATTGAGACTATTTTCCGGGGGGTTAGACAAGTAATCATCGTCCTCCAGAT
ATTTAATTCTCCAGGGGTCGAGTCGAAGTTACAAAATTTTCCAgggtata
aaaaaaatttatgaccAATTTCCAGAGGGCTAAATGATAATATGAATTTT
TCCAGGGGTtaataccaaattttacttCGTCCACCCTACCACCAGAACCa
tgggaaaaaaatttccaggggatggtggaaagaatttttccaggggcttt
ttcagattttaccatttttccagggggtatagacacattttcagagaaaa
aaaattaccctaaaaaggttcgtccacacccctgtatggtttttttttgg
aatggcCCAATGGTATACTAATATCAAACTTCTTTCTGAGCTTTTAACCC
TTAGGAGACGGATAATTTATGCCCAAAAAAGTGTTCATCTTTTAATCATC
AATCGAGTGACCGTAACCATTGATCTCAAAGCCCCGAAGGAGCTAAACTC
ATGGATGTGAAATGAAGCCGCTCATTTTCCATTCAGAACAGTGACCCGTG
tgttttccaaagaaatttctTTAGTGCAGGGCAAACTTAAAGCTTCACTT
TCTCTTGcttgagaaaaattgaagattcctctctagtcCCTTCGGGGCTT
CAAGCTCAATGACCGTAACTCAATACATTAACAGTATCAGTCTAAAGAAG
GTTAGAGAGAAAGTCAGTGTACTAAAATCACCTTAATGAACACACTTGAG
CCTGATAATATAATGTTTTTAGGGACTCTACAACttgttcttagaaaaat
aattttcattcattccATTAAAGTGGATAAACGGCCAGCAGCCAAATACT
CAAGACTGGACAAAGTATGTTGGACAATTGTTTAGAATCAATCTCGGATG
TTTACCATTGGAAGGAAATCAATTTCAACCCAACTGTTTATTGGTTAAAA
TAAAGGGGAAAAGAGGtatctattttttcaaagttaatatttcagccaaa
tttagGGGAAATGATACCAAATAGTAATTACTGACTTCCAAACTAAAATT
AATTCAGCAAAATTGcataatatttttataactaGAATGGGGTTATCACG
GGAGGTGGGTGttgggcactgaccttgacggccgacggggacgtgccgct
ggagttgtAATAGTGGACCCTGTCGGATATGAATGTATGGTAAATTTGAG
ACCCTGTCAGCGAAATgtagcaaaatatttcaaaaaaagatttcaaattt
ccacCTGAAAATTGTTCAAAGTAACCAAAactcagatacacatcttggtA
ATTAGTAAACTTTGGACCCTGTCATATATCTTCGGAGCCTaaaaaaaaGA
ACTCAGACCAGCCGAAATTCCCCATTTATAATGTTACCTGGTGCATCCTC
CGGgattagatttagattttaactattaaaattatttttctaatttctta
AACCGATGTGCCACTTTGATTTCTAGAATATACTACTGGAAATCTACCGC
CCACAATACCCGCCACCACAACATCACAGCACACCAAAACAGGATTAACA
GATCAACCAGCCACTCAAACGACAACTGCACCAAAG Coding sequence (CDS) from alignment at sc0000056_pilon:1183899..1186784+ >XLOC_043702 ID=XLOC_043702|Name=XLOC_043702|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1482bp|location=Sequence derived from alignment at sc0000056_pilon:1183899..1186784+ (Clytia hemisphaerica_ch_hm2_pilon)
ATggaacttttttgtttcaaaatgatTCTATTGCCGTGTATTCTgctgac
tgttttttttttcggtgaAATGAAAGCGAACACTATAGAAGTGAACCGAA
AAAATGGTTTATCCTTTGGAGATCTTTATGTTCCACCAGGTGGTATTGCA
GAATGCTCAAGATACGGTggtgttgattttttttcgagttCTTGCCAATG
CAAAAATGCGCAAGGGATCTTGGGAACGTTCACAGATCAATGTGACTATG
ACTTGAAAACTAGCTCAGATggaacttttttgtttcaaaatgatTCTATT
GCCGTGTATTCTgctgactgttttttttttcggtgaAATGAAAGCGAACA
CTATAGAAGTGAACCGAAAAAATGGTTTATCCTTTGGAGATCTTTATGTT
CCACCAGGTGGTATTGCAGAATGCTCAAGATACGGTggtgttgatttttt
ttcgagttCTTGCCAATGCAAAAATGCGCAAGGGATCTTGGGAACGTTCA
CAGATCAATGTGACTATGACTTGAAAACTAGCTCAGgGTGCGAGTGGCAG
ATTCATCAAAGCAATTCACCATTTTACATGGATAGTGCAACTGACATTCT
GAATAAAGTTTTTATTGGCACTGATAAAACAACATTCGTAACAAATTGCA
AGGATATCGCATACTTAGGAGCTAAGATATGGGAAAATGGGAAATGGAAT
TCTTTTGCAGCTGATCAATTTGATAAGGAGAAAATCGGTAATCAATACTT
ACTGAAGgGTGCGAGTGGCAGATTCATCAAAGCAATTCACCATTTTACAT
GGATAGTGCAACTGACATTCTGAATAAAGTTTTTATTGGCACTGATAAAA
CAACATTCGTAACAAATTGCAAGGATATCGCATACTTAGGAGCTAAGATA
TGGGAAAATGGGAAATGGAATTCTTTTGCAGCTGATCAATTTGATAAGGA
GAAAATCGGTAATCAATACTTACTGAAGTGGATAAACGGCCAGCAGCCAA
ATACTCAAGACTGGACAAAGTATGTTGGACAATTGTTTAGAATCAATCTC
GGATGTTTACCATTGGAAGGAAATCAATTTCAACCCAACTGTTTATTGGT
TAAAATAAAGGGGAAAAGAGTGGATAAACGGCCAGCAGCCAAATACTCAA
GACTGGACAAAGTATGTTGGACAATTGTTTAGAATCAATCTCGGATGTTT
ACCATTGGAAGGAAATCAATTTCAACCCAACTGTTTATTGGTTAAAATAA
AGGGGAAAAGAGAATATACTACTGGAAATCTACCGCCCACAATACCCGCC
ACCACAACATCACAGCACACCAAAACAGGATTAACAGATCAACCAGCCAC
TCAAACGACAACTGCACCAAAGAATATACTACTGGAAATCTACCGCCCAC
AATACCCGCCACCACAACATCACAGCACACCAAAACAGGATTAACAGATC
AACCAGCCACTCAAACGACAACTGCACCAAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000056_pilon | genome | sc0000056_pilon:1183899..1186784 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 634-741:2779 |
| Aaloc | 490-630:2124 |
| Aaloc | 271-489:532 |
| Aaloc | 1-267:1 |
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