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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000056_pilon:1145831..1149925- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043698 ID=XLOC_043698|Name=XLOC_043698|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4095bp|location=Sequence derived from alignment at sc0000056_pilon:1145831..1149925- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAGCTAACACTCACATTTGCCTTGGCTTGCTTAGTTGCAAACGT
TCTCTGTGAACACCATACCACAGGTTCGTCATGCACTCTTTTTTATAAAC
ATACGTAAAAATCAGGTCAAGGCTCAATATGCTTAGCAAAAAATCATTTT
CAGCCTTAATTTATGCTTATTTATATGCTTCGATTTGTTGATTTTCTTTT
ACTTCATGAAAATTTCTAGTCGGAACATTGATTCGGATCAAAGATTTCAA
TTTTTTTCTTTGTAATTTTGGGGTAAATCTTTGGTCCAAGATAGCTCAAA
ACAGACAGCTTGAATACAGCTTACACGAATTTGAAAAAAGTGTATTATAT
TTTTCAGCAAAAGTGAAGCTGCCTACTTAAGCTCTTAATAACCCCATTAT
ATCTTTGTCTAGCTTCAGAATTTCTTTTCAAATCCCTGCAACTTTTTTAC
TTCTCATTATACACCAGAGCGACTATTGTATTTATGTATGACTTGCTCTC
TCAAATTCTCTTTTCATCATTTTAGTTTCTACAAATACTTGTGTACCAGA
ATGTCAGAATGGAGGAACGTGTGTGAATGGAGAGTGCGTTTGTGGACCAT
GCATGCAAGGTGCTCTATGTGAAATCGGTAAGTGCGCCAGTATTTATGGA
GCGAAGGCCAATTGGACAAGGGCGTCAGCGTCTCAAACCAGAGATTCGCG
GTTCGAGTCCCCGCTCCTTCCAATGTTCCGATCAGTTCATAGATAGCCGA
GCCTGCTAGTCGTGGACCCCGTGAAAACAATCGAAAGACTGTCTACAAGT
CCTAGGTTACTTGGCTATCCACGTAAAATGTCGACTCTATGTATCTATTT
ACTTTACCTTAAGGGAAGAGTTTTCACATAATTTGATTTCACTGTGTTGG
GTGTAAATCGCGACTTTAAATTTCATGAAAGGTAAAACTGTAGTAGTGTA
TTCAGGAAGGAGGGTGAAAAATAAGTGTTCTAGCAGATTTTATTTAATGA
TGATCATTCATTGGGGGGGGGGGGGGTTTGTAGGGGTTCGAAATACCGTT
TTACCGTTAAAATTTTTGCTGAAATCCCGGAATCCCGAAAATTGAAAAAA
TAATAACACCGTCACACCGGTTTGTACAGGTTCAAATACCGGCAAAATGA
CAAAAAATAAGGCCAAATACCGTCACCGTCTGATTTTAAAATACCGTTTT
CCCGTCTTTTTTTTCCTCAAATCCGTAAAAGTACAAACCCCCCCCTTCAT
TCATTTTGTAAAAATAAAGTATCTGTGCTCCCTACTAAAGAGTAAGAAGA
TTCTTGCTAAAATTTTATTAAATATCAAGTATTTTTATGATTGCAGAAAC
TTGCAAGAAATTCACTTTACGGTACGAGAAAACTGGAGAATGCATTGGCG
TCAATGCGCAGAGCAACCTTTTCTTGACCAACAATTGCGATACCCTCTTC
ACTATCGATGATGATGGCAAAATTAGGGACTTAGAAGGCAAAAGGTTCGT
ATTTATGAATTGTTTGGTTTTTGTTTATGTTTTGAAAATAATTAATGTTT
TGTTTTCAGGATACCCAATTTAGTCTCTTTACTACTTCTCCGGTGTTTCT
GCACAAACGTTTGAAGCTTCCGCTGAACCTCACTAAATTTAGCTTTCTCT
GATCACCGCTTATGGTAAAAAGCTTAAAAACTTGAATTTCTGGCAGTGGT
GCTCAAATAAGGACCCTAATTTGCGGCCCTTAATGATAGTTTTTTTAAAA
AAAAGGTCATGAAAATGCTACGTAAAAGTTGCCAAAGCCTAAATCCAAGG
TGCACTGTAAGAGGTAAAAAATTCAATAGAGAATGGCTGAAAATACGCTG
TAACGGTCCAACTTTCTCTCTTTTTAGATGTTTCAATGGACCAGCATTCA
ACTTCAGAATGAACTTTTTAGTTGCTGTTGATTGTGGCAATCCTGGTACT
GCTTACAGTACCACCAAAAATGGTGCTTTAATTCAAAAAGCTACTCAAAC
ATGCGTCACACCTTTTGTTGGTATTTTGTTGGTCTTAGATAGAGCTTGTC
AAGACGTTTTCAAATTCGATCAAGGTAAATATAATAACACGGTAATACCA
AAATGGGTTTCTGACGAGATCAAAAATCAATGTTTCAGAATGATTTTTTC
AAGTAGTTTTGCCGAATTTTGATTTATAGTCGCTGATAAGCCATTATGTC
GTAATCTTTAGCGTACATTGTGCCCGAAAAAAAGCAGAAATTAATTAATA
TAATGTAAATCTTCATAATTTATGGTAATGTTTATGTCTCAATTACTTGA
TTTCTTTTCTTAAAGGCCTACTAAATTACCTTGACAATAGTATATCTATT
GACTGAACAAAGAATCTCCATCTTATTGCAATTATTCCAAACTGAGTTAC
AGGAATGATTTTGAGGATTTTCATTTATATGAATTCTATTCTGCTTTTCT
CCGGGCACTCTGTATATCTAGTAGATGAGCTGACCGCAGAATTTCATCCT
TCTTTTTTTAGCGAGATGTGATAAGCACAACCCCTGTGAGAACGGTGCAG
AATGCATGCAAGAAGGTGATAAATACACGTGCAAGTGTAAACCAGGATTT
AAAGGATGCAACTGTGAAATTAGTAAGTTCTGAGATTGCAGTCGAATCTC
TGTATTTTGATCTTTAAGGGACAAAAAATTTTCTTCTTTATATTAGAGGA
GGATTTGAATTACTGAGAGATTCTAAAGATTTTTCAAGCTGAGAGAAATA
TCGTTTTATATCGAATTTCAGAAAGACTCAAATAAAGGCTTCGAGTAAGA
AAAAGTTGGCTGTTTTCCTCCTAGATTATCAATGGGGCGTATTGAAATTG
AACCTACAATTACACCCCAATCTCAGCTCCCAAGTGTTTTTCTGCTGTTT
TTTTTCACCAGGAAGCCCGAGATTATCCTAGAACATCTGTTTATTAGAGA
CCTGTTTAAACTTAACGATTAGCACGAGCCTACAATTCATAAATTCTTTA
TAGACATTGACGAATGTGCATCCAACCCATGCAAGAATGGAGCAACCTGT
ATTGACGGTATCAACTCCTTCACCTGCAAATGTGTCCCAGGATACACCGG
AGATCTTTGTGAAACTGGTATGCCTTTTCTTTAATGACTACATTTATGGA
AATTTATGACGTAAATCTTAACTAAAATTAAGATGAAAACATCAAAATTC
ATTGTCGCAGAGGATCTGTTGTCATTTTTTTTTCTAATTTGAGATTTTTC
AAACCGAACGCTACGACGGAGTTCGGTTCAAAGAGGGGAGACGATGAATG
AAGTGTTGCCATTTATAAATCATATTTCATCCGTACGGGAATTTTATTAT
CAAACAGACAATGCGCACATAGTCAATAAAAGGACAAGCATGAGATAGAT
AGACACACTCTGTTATGAAATTCACTCATCGTCTTCTTTCATTCCTCAGA
CATCAATGAATGTGCTGGTCATCCTTGTGGTAAGCATGGAACATGCGTGG
ACTGTCTTAACGAATTCAAATGTGTATGTGACCTTGGCTACAGTGGAGAA
ACTTGCCAAACCAAAAAGGGTAAGTTACTTTCTCAACCCCGGTGTCAGGA
AAGTTTTAAGCCTCTCCGCTTTTGGGCGATTCAAATTTTTCTACCATTTA
CTAGCGAATTTCAGCTCATGTTAGTCTTCAGCTATTCGATTTTTATGAAT
GTTCCGTCGTCCCTGTTTCTACTTTTAAGATACATATATTTACGTACAAA
TAGTTTTTTAAATTTTATTTTTGACGTTTTTGACCCTTATTAACACGACG
TTTTGGGCGCAAAAACGACCCCTAGTCTCCACAATTTCTTTTGAAAAATT
GCGCCTGGGATTCATTTAAGGTACAGGTTTACAATGAATGCACCACTTTT
ATGATGGATGCATTTTGAATTTCCTCCCTCCTTTTTATAGAGTGTCACAT
CAAATGCAGTCGTTATGCTAGAAGAAACTTCAATCCGGTTTGCTCTTCCG
ATGGCCGAGTATTCCGAAACAAATGCGACTTCCAAGAATACAAATGTTTC
AAACATGGAAAAGTGAGCTCCGTTGCATGTCACAAGAAATGGTAA Coding sequence (CDS) from alignment at sc0000056_pilon:1145831..1149925- >XLOC_043698 ID=XLOC_043698|Name=XLOC_043698|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2040bp|location=Sequence derived from alignment at sc0000056_pilon:1145831..1149925- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAGCTAACACTCACATTTGCCTTGGCTTGCTTAGTTGCAAACGT
TCTCTGTGAACACCATACCACAGATGATGAAGCTAACACTCACATTTGCC
TTGGCTTGCTTAGTTGCAAACGTTCTCTGTGAACACCATACCACAGTTTC
TACAAATACTTGTGTACCAGAATGTCAGAATGGAGGAACGTGTGTGAATG
GAGAGTGCGTTTGTGGACCATGCATGCAAGGTGCTCTATGTGAAATCGTT
TCTACAAATACTTGTGTACCAGAATGTCAGAATGGAGGAACGTGTGTGAA
TGGAGAGTGCGTTTGTGGACCATGCATGCAAGGTGCTCTATGTGAAATCG
AAACTTGCAAGAAATTCACTTTACGGTACGAGAAAACTGGAGAATGCATT
GGCGTCAATGCGCAGAGCAACCTTTTCTTGACCAACAATTGCGATACCCT
CTTCACTATCGATGATGATGGCAAAATTAGGGACTTAGAAGGCAAAAGAA
ACTTGCAAGAAATTCACTTTACGGTACGAGAAAACTGGAGAATGCATTGG
CGTCAATGCGCAGAGCAACCTTTTCTTGACCAACAATTGCGATACCCTCT
TCACTATCGATGATGATGGCAAAATTAGGGACTTAGAAGGCAAAAGATGT
TTCAATGGACCAGCATTCAACTTCAGAATGAACTTTTTAGTTGCTGTTGA
TTGTGGCAATCCTGGTACTGCTTACAGTACCACCAAAAATGGTGCTTTAA
TTCAAAAAGCTACTCAAACATGCGTCACACCTTTTGTTGGTATTTTGTTG
GTCTTAGATAGAGCTTGTCAAGACGTTTTCAAATTCGATCAAGATGTTTC
AATGGACCAGCATTCAACTTCAGAATGAACTTTTTAGTTGCTGTTGATTG
TGGCAATCCTGGTACTGCTTACAGTACCACCAAAAATGGTGCTTTAATTC
AAAAAGCTACTCAAACATGCGTCACACCTTTTGTTGGTATTTTGTTGGTC
TTAGATAGAGCTTGTCAAGACGTTTTCAAATTCGATCAAGCGAGATGTGA
TAAGCACAACCCCTGTGAGAACGGTGCAGAATGCATGCAAGAAGGTGATA
AATACACGTGCAAGTGTAAACCAGGATTTAAAGGATGCAACTGTGAAATT
ACGAGATGTGATAAGCACAACCCCTGTGAGAACGGTGCAGAATGCATGCA
AGAAGGTGATAAATACACGTGCAAGTGTAAACCAGGATTTAAAGGATGCA
ACTGTGAAATTAACATTGACGAATGTGCATCCAACCCATGCAAGAATGGA
GCAACCTGTATTGACGGTATCAACTCCTTCACCTGCAAATGTGTCCCAGG
ATACACCGGAGATCTTTGTGAAACTGACATTGACGAATGTGCATCCAACC
CATGCAAGAATGGAGCAACCTGTATTGACGGTATCAACTCCTTCACCTGC
AAATGTGTCCCAGGATACACCGGAGATCTTTGTGAAACTGACATCAATGA
ATGTGCTGGTCATCCTTGTGGTAAGCATGGAACATGCGTGGACTGTCTTA
ACGAATTCAAATGTGTATGTGACCTTGGCTACAGTGGAGAAACTTGCCAA
ACCAAAAAGGACATCAATGAATGTGCTGGTCATCCTTGTGGTAAGCATGG
AACATGCGTGGACTGTCTTAACGAATTCAAATGTGTATGTGACCTTGGCT
ACAGTGGAGAAACTTGCCAAACCAAAAAGGAGTGTCACATCAAATGCAGT
CGTTATGCTAGAAGAAACTTCAATCCGGTTTGCTCTTCCGATGGCCGAGT
ATTCCGAAACAAATGCGACTTCCAAGAATACAAATGTTTCAAACATGGAA
AAGTGAGCTCCGTTGCATGTCACAAGAAATGGTAAAGTGTCACATCAAAT
GCAGTCGTTATGCTAGAAGAAACTTCAATCCGGTTTGCTCTTCCGATGGC
CGAGTATTCCGAAACAAATGCGACTTCCAAGAATACAAATGTTTCAAACA
TGGAAAAGTGAGCTCCGTTGCATGTCACAAGAAATGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000056_pilon | genome | sc0000056_pilon:1145831..1149925 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 868-1020:154 |
| Aaloc | 748-864:645 |
| Aaloc | 634-744:1091 |
| Aaloc | 523-630:1583 |
| Aaloc | 325-519:2218 |
| Aaloc | 178-321:2748 |
| Aaloc | 76-174:3569 |
| Aaloc | 1-72:4096 |
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