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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000002_pilon:3764820..3771994- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043652 ID=XLOC_043652|Name=XLOC_043652|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7175bp|location=Sequence derived from alignment at sc0000002_pilon:3764820..3771994- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGAAGAAGAAGTTGATGTCAACCTATTTGCTCCGGATGGAGATGA
AGACGACTTTGAAAACGGAGATAGTGGTCATGACCAGATCAACATAAATT
CAAAGGTAGGTGGTTTGGTTCACAGATATCTTATATTTAAAACACTAATT
ATTGGCTACTTCGCCCCTAGATGAAGCAAAATAATCCATCTTGAATGAAG
TGGCGCCACAATTTAGCTTGCGTGATCCTTGAAATATTGAAGTTATTACA
GTGTCAAAAAAACTGACAGTGAAAACCATGGTTTCTACTGCAGTCTACTT
TCAGCAAAGATGGCTTAACCTGTTTTTGCTTGGGAAAGATAGACTAGCTC
TATCTAGTGTTTTAGATAAGATATCTGATGGTTTGTTTGTATACATGAAC
CTTAAAGGTTCCCGCCTCACTGCTTTTATCAGTAGTTCACTGAAATTTTT
TTCCAAATTCATACCAAATCCCACAAAATTTTAAGGTTTTGAGACTTTTA
CACTCGACTTCCTTTTTTTCTAATTCCTCAGTTTATCAGGGACACGACAG
TTGATGAATTGAGGCAAAGACCGTACAAAAAACTTGAAAATTCCTGATTC
CCTTTAACTTTTATTTCACTTGAAATAAATAATATTATTATGAAATATAT
AAAATAAAATCCTTTATCCTGCATCAGTAAGGTTCTAGCGATTCCATCAT
TCCATTCCATCTCACGTGGAGGTGGGATATAAACCGTATCTGTCTTCCTC
GCATTCGATTGAGAAAATTGCATATTGACGAATGCGCTTTCAAATGTTTT
GCTCAAAATTCGAATGTTTTGTTTTGAAAAGACAGAAAAAATAAAACAAG
GGGAAAATACATAAATTGTAGCGATTGAGAATGTTTGTGTCAATAGGATG
CAGAAAATCTTTAAGTTATTTTGATTTTTACTTTTCTTCGGCGGATATGG
ATTGAGCAAGACTAGGCAAGCCTCGCCACCAATACGGTTTTTACTGACCC
TGTATATCCTGTATCCCACCTTGAGAAGACCGTGTAACTAAATATTATTA
ATGTAGTTCTCCAGTGATATTCCATTTATATAACACAACATGTTTGAGTT
AACAGTGGTTTTAGGAAGATTTTCAAAAGAAACTCGGCTTAAACTTGGCA
CACAGGTTCCATGGGTTGTTTTGAATATCTGGCATTTCTTTTTTTTTCAT
TTTACAGAAATTTTGATTTTGGGGCCCTAGGCCGAGTTTTTTTTATTTGT
TTTGTTACAATTGAGCCTAGGAATATCTTTAAGCTACTGAAGTTGAGCCC
AGTGCGTTGCCCACGTTCGACTATTTTAAAGAATTATCTTATTTTATCTT
AACATTTTAGTTTGCTTTGGTAAGTCCTAATGCATCAGAATACACATGTC
TTGTCAAGAAAGTTCAAGATTTGATTGAAGAAGGTCAAGGGGAAACAATC
TATGAAATCGGTGTTGATGGTAAAAACCAGCAGTTTACTTTTTAGTACTT
TTTTATATCAAATCGAGGGCCTGTCGCTTTTGACAGAATTCGCTTCAATT
ATTATGGTATTATTTCTTTCGACTTTTTATGGGTTAATAATAGAAAAATC
ATAATTTTTGGAAAAGAGTATTTATTAAACAACTTGACTTTTAGGCTTTT
GTGTTTTTTAGTATGAGGTCTTGTTAACCGGTTACTTTTTCGAAGAGGGC
TACACGACTTTTTGCGCAATGCAATTGGTTCTTTTCGCATGACGACGGGC
CTACATTGTCCAGAGTTGCCCGTCGTTAGGAAAATTCATTGTGATGTCAC
TTTTTCAAAGGAAAATGAACAATGGGTTGACATCATTTCTCTCATTTTTT
ATTTCTGACGTCAGAAATTATAAGAATTTTTGATCTCTTTTCACTTGTTT
TTTTCGCTTTATTGCACTATTTTCCCTAGATATATCGCTAAAAATCAATC
GAAGCTGAAGGAAATGATTAACAAATACAATAATGACCGGTTTTTTCGGG
CTGTACTGAAAATATAGCCCTCGGTCAATGCAACAACCTCCCAAGCTCGG
TCGTTACTTGACCTCGGGCAATATTTCTCAGTGCAGCCCTCACTAACCGT
TCATTATTGTATTATTACTGTATTATTTCTTTCATAGAAAAAGGAGAGTC
TGGCTTGAACGATGAAGATTTCAAGGCTTCGATCGCCACACTACAAAGTA
TTGCTGAACAACTGAATTGCCAAATCAATATGTTACGCGAAAAAGACATT
GAAACACGCAAAACGGCTGAATTTCTAATACGAGGAAATTTGGTGGAAGA
AGATTTCTCTGAAGTTAGGTAAATTATGAACTTGAATTTAATTTTTCGTT
CGTAAACCTGTAATGGACTTATTTTACTATTTAGCTGTCCCATTAGTGGC
TGGGTAGCTCAGTTGGTAGGGCATTCGCCTTACGATCCTAGAATGCACCC
CCCTGAGCTTAGGGGGGGGGGGCTAAACCATTTTTGCTTGATTGAGGGCG
GAATTTTTCAAAAAGTACTTGGGGCTAGCTTGCTAGGGGAGGGCTGAGTG
TTGTGTAATAGAACTGGGGGCAGAGATGATAGGTAACATAAATTTTAAAT
TATGTTAAGAATCTATGCTGTGGCGAAGGTTTTAACCCTCTTGAAAAGAT
TTATAGAGAATTTCCATGCAAAATTTCTTTGATATTTTGTATGATGTCTG
ACAGTCTGAAGTATCCCTGTTCTAAGTAGTATTTTTCATTCAAATATCTT
GCTTATATTTTTTTTCACTTCAGAGTTGCAGTTGTAGGAAACGTTGATGC
AGGAAAAAGTACACTGTTGGGTGTTTTGACACACGGCTCATTAGACGATG
GTAGGGGAACGGCTCGTTTGAAATTGTTCCGGCACAAACACGAAGCGGAA
ACAGGCCGGACAAGCAGCGTTGGAAATGATATTCTTGGATTCGATTCGAA
AGGAGACATTGTAAATAAACCAGATAAGCACAGTAAGGAGACACAATCCT
TGCTCAATATAATTATAGTAATAGAATGCATTTTCATAAATCACATCGAA
GGCCTGCTAACATTAAGACTATATGTCAATGCAGCGTTTTTAGATACCTT
TTCTGATCTTTTATTGTCCATTAATTATAATATTTTTATATTTCCATACT
CTCTGATTCAGATGAGTCATAAATTGTAGTCTTTCAGTATGAAATAAATT
CTCATGTCAAACAGTGTCAAATAGAGAAAACAAACGGGGAAGAAAACTGG
AAATATAATGATTTTTTTCTTTGATTCCACACAGGTGGTGCGTTAGATTG
GACACAGATTTGCAAAGAATCTTCCAAAGTGGTCACGTTCATTGATTTGG
CTGGTCACGAAAAATACTTGAAGACAACTGTATTTGGTATGACTGGACAC
GCCCCTGATTTTGCAATGTTGATGGTCGGTTCCAATGCTGGGATTGTTGG
TATGACTAAAGGTATTCAAAACAGACATTTTTCTGATACATTAGATAATT
CAATTTCTTGAATGTTCCATGAGGATGTTTGCATAATGACGGTTCCGTTC
TTTCCCAAACGAAATTGAACAATTCTTTTAGTTTATTCTTGGAATTCATC
GATGTTTTAACCAATAGATCGGCTTGTTTTTGTTTTGGAGCAGAGCAGAA
CCGTTTTGCGCGACATGGTATTTCCCGAAAAATATTGCCATCTAATATCA
TGGCTCCGAATGGGGTTCTAGGTCCCCCCCGACAAATTTAGGTCCCCCCT
AAGTTTTAGGTCCCCCCACTTTTCAGTAAGGTTCAGGTCCCAGTTGAAAT
CTAAAGGTTCAGGTCCCTACAAAAAGTACTTTCAAGGTTCAGCAGGTCCC
ATCAAAGAAAAATAATTCGGCAATTCAACAAAGCAAAACATTCGAATCGC
TTCGCAAAAATGGAATGTCGTTTACCACCCCCTCTCGCACGCAGATAAAA
ATAAAACTGTAAAATATTTCACAACAGAACATTAAAACCAAACAAAAAAA
TATTTCTACGAGTTCTTAATTATTGCAATTAGCCCCCAGAACTTTTGTAC
AGCCCTTCAGGTCCCCCCACTTTTTTAGCCCCCCCCCCCTGAGTTTAAAA
AAAGAGACAGCTCCCACCCACTTTTAGGCCGATTTTAGATTTACACCCCC
CCCCCCCAAATAAGTGGGGGGGGGGCGAGCCATGAGCCAAAAGTAATGTT
TCATTAAAGAATGATATTCTAACAGGTGATGGAAAATTTAAATTCATCCC
ATAACAATAACCCACCAATACCAAACATTACTCGTCCCTGTGTTTACCTA
CAGTTTAAAAATGTGGGATTATGGTGGCGTTGTTGACCTCAAATCGGCGT
TGTTTCTGGTCGTTTTGACTTTAATTCTTTTTGGTAAACAATGTCTTTGA
CACCTTTTTTATAGAGCATTTGGGATTGGCACTGGCACTCAACGTTCCTG
TTTTTGTTGCTGTAACAAAAATTGATATGTGTCCTCCTAATGTTCTACAA
GAAACCATGAAATTGTTATGTCGTATCCTCAAATCTCCTGGTTGTCGTAA
AATCCCTGTCATCGTTTCCAATAAAGATGACGTCATCGTTTCAGCTACTA
ATTTCTCTTCTGAAAGGTGGGTGGTGTTGTATATCACAAATTCTTCATCT
ACATTTCTTTTTTATAAAAACCAGTAATTTTTTTATTGAGGCGCGGCTGT
TGTTTATTATTTGTTCGTCATTTTGTTCTTAGTCTGTTCTTAGATATTGG
GCAAAATTATTTTAGGCTTTATATACAGTCTTTTGCTACCTTGACCCTTA
AATTACTTCAAATCCAGAAATTATAGGCTCGACATTGCTCTTAAATTGTT
CTAAATTTTTGATGATTATGAAACTCATTGCTCTTATAAAGTTACTCTTA
TAAAGAAAGGAGTTTACCCTATTGGCTGACTTTGACAGTAATGTAAAAAT
TACCACTCGCTAAATCGTTTAGATTCTTTAGGGTAGTGGCGTGGATTGCT
AAGTTGCAAATACTGATAAAGACTTTAAATCTGACAGAGATTGTTGATCA
AGGAAACAGAATAGATATGCTTTGAGTTTTCATAATTGTGTGATATATTT
CATAGGCGAAGCGAGATACCCTGCAAAATTTATGAGGGAGTGCAGACGTT
TATGACATATTCATTATCTTTTGATAAAACAAAGACAATAATTACAATGT
CGTAAAAACCGCTCTCATCCATAAATTTTGCAGAGTATCTCGCTACGCCT
ATGTATTTGCCACTTTCTTAGGATATGTCCGATCTTTCAAATCTCCAACG
TGACCGGAGAAAACTTGGATTTGTTGAAAGGTTTTCTCAACCTGTTGAGC
GTACGTGGTCAATACGTTTCGTCCAAACCGCCTCTGTTTCAAATCGATGA
CACATACTCTGTATCGGTAAGTACACGTTTTTTATAAGATTATCCTAAAT
TAATGAAGCCTTTGGATGTTCTTATTCTTTTGAGTTTTAAGCTTGAAAAT
GTTCTTAACATGTTCTTATTAACACTTATTATCTTTTTACCCATTTTCCT
AAGAAATCGCGTTTTTAGAGTCCACAAAGCCTTTAATTGTTCTTAACTTG
TTCTTAATATTTTGGCCAGCGAAGTCTTATGTTCTTATATAGTTTGTTCT
TATGAAAAAACGTGTATCCAAGCATCAAAATAACTTAGACATTACTAATC
ACTGCTCAAAGTTTAACGCTAGATGGTATTTGGTATTCCGATACTCGGTC
CGAAAGTCAATATCTAACTTCTTACTGCTTGCAAAAACTGTTTCTCTTTA
AACAATACATCTGGTACATACATCATCGTCTACAAATATTTTGGCCGGTT
ATACAAATGACTGTATAGTATAGACCATATATTCTTTTGTCAGTATAGTG
GTCTTAAGAATCCTTCAAAAAATCTCTTCTTTCTTCTCGCCACAGGGTGT
AGGTACGGTCGTCTCAGGGACCACCATGCAAGGCGTCATCCGTTTAAACG
ACATCTTGCTATTGGGCCCGGACAGCACGGGAGCTTTTCAACCTGTACCG
ATCAAAAGTATACATCGAAAACGTTTACCGGTCAAAGAAGTTCGAGCAGG
GCAAACAGCTTCGTTTTCAATGAAAAAGGTATTTTTTATTCTGAACACGT
ATCCAGAATTCTTGAATCGGTCTACGTTTTGAGAGTTATATATTAAGTTT
TATCGAACCATGCTTTGAGTCCTTATAGTTGAGCATCTTACGCGAAGATA
TTTTTGTAACACACTAGTAGGTATATAGCATTGCACCGAGTAGTTCGAAA
TTATTACATTTTCTGATCAAATTGCCCCCGTACTCTGACGTCCACTTGAA
TTTCAGTTCATTTTGTAACTTTACCTAACTTGCTGTTTTGAAATAGCTTG
TAAAGAATGACACTTTTTACTGTTTTTGTTTTTCATCATTTTCAGATCAA
ACGACAAGACATTCGAAAAGGAATGGTACTAGCGGGCCAAGATCTTGAAC
CACGTGCCACGTGGGAATTCGATGCGGACGTGTTAGTACTACATCATCCA
ACCACCATCAGTGCGAAATATCAAGCTATGGGTACGAGACATTCATTACT
TTATCCACTTCAGATAATCCATTTATGGATACTCATTTACTATACTTGAG
CAACATGATTTTTTAGCTCAGAAGTTTGAAGTAGAATTCGGATAGAAACC
AAAAAATAGTTCAAAATGTATAATGTATAAGGATAAAAGCTAAGGTTTTT
GATTCATAGAGATGGGGTAACGTTCACTTCTAGTATATACATCTTTCCTG
TTTCTCGAATTTTATTCTCCTCCTTTTGATACAGTTCATTGTGGAAGCTT
ACGCCAGACAGCGACCATCGTCCGAATGGATAAGGAACATCTGCGGACAG
GTGACAAAGCCTCATGCCGTTTCCGGTTCATGAAATCTGCGGAGTACATA
ACTATCGGAACAAAGATGATATTCAGAGAAGGGCGGACCAAAGCGGTAGG
CACTATAACAAAATTACACGAGGAAGTTGCAGGGCGTAGCACCCATAATA
CACGCCAAAATAAACAATTCAAAGCTCTCATGCACCAGCGTGGAAAGGGC
GGTAATCGTAAAACTCCGGCGCAGAATAAGCCGCCACAAGCAGCCGCAGC
TGCAGCTACGGCGTCTGCGAAATAG Coding sequence (CDS) from alignment at sc0000002_pilon:3764820..3771994- >XLOC_043652 ID=XLOC_043652|Name=XLOC_043652|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3576bp|location=Sequence derived from alignment at sc0000002_pilon:3764820..3771994- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGAAGAAGAAGTTGATGTCAACCTATTTGCTCCGGATGGAGATGA
AGACGACTTTGAAAACGGAGATAGTGGTCATGACCAGATCAACATAAATT
CAAAGATGAATGAAGAAGAAGTTGATGTCAACCTATTTGCTCCGGATGGA
GATGAAGACGACTTTGAAAACGGAGATAGTGGTCATGACCAGATCAACAT
AAATTCAAAGTTTGCTTTGGTAAGTCCTAATGCATCAGAATACACATGTC
TTGTCAAGAAAGTTCAAGATTTGATTGAAGAAGGTCAAGGGGAAACAATC
TATGAAATCGGTGTTGATGTTTGCTTTGGTAAGTCCTAATGCATCAGAAT
ACACATGTCTTGTCAAGAAAGTTCAAGATTTGATTGAAGAAGGTCAAGGG
GAAACAATCTATGAAATCGGTGTTGATGAAAAAGGAGAGTCTGGCTTGAA
CGATGAAGATTTCAAGGCTTCGATCGCCACACTACAAAGTATTGCTGAAC
AACTGAATTGCCAAATCAATATGTTACGCGAAAAAGACATTGAAACACGC
AAAACGGCTGAATTTCTAATACGAGGAAATTTGGTGGAAGAAGATTTCTC
TGAAGTTAGAAAAAGGAGAGTCTGGCTTGAACGATGAAGATTTCAAGGCT
TCGATCGCCACACTACAAAGTATTGCTGAACAACTGAATTGCCAAATCAA
TATGTTACGCGAAAAAGACATTGAAACACGCAAAACGGCTGAATTTCTAA
TACGAGGAAATTTGGTGGAAGAAGATTTCTCTGAAGTTAGAGTTGCAGTT
GTAGGAAACGTTGATGCAGGAAAAAGTACACTGTTGGGTGTTTTGACACA
CGGCTCATTAGACGATGGTAGGGGAACGGCTCGTTTGAAATTGTTCCGGC
ACAAACACGAAGCGGAAACAGGCCGGACAAGCAGCGTTGGAAATGATATT
CTTGGATTCGATTCGAAAGGAGACATTGTAAATAAACCAGATAAGCACAA
GTTGCAGTTGTAGGAAACGTTGATGCAGGAAAAAGTACACTGTTGGGTGT
TTTGACACACGGCTCATTAGACGATGGTAGGGGAACGGCTCGTTTGAAAT
TGTTCCGGCACAAACACGAAGCGGAAACAGGCCGGACAAGCAGCGTTGGA
AATGATATTCTTGGATTCGATTCGAAAGGAGACATTGTAAATAAACCAGA
TAAGCACAGTGGTGCGTTAGATTGGACACAGATTTGCAAAGAATCTTCCA
AAGTGGTCACGTTCATTGATTTGGCTGGTCACGAAAAATACTTGAAGACA
ACTGTATTTGGTATGACTGGACACGCCCCTGATTTTGCAATGTTGATGGT
CGGTTCCAATGCTGGGATTGTTGGTATGACTAAAGGTGGTGCGTTAGATT
GGACACAGATTTGCAAAGAATCTTCCAAAGTGGTCACGTTCATTGATTTG
GCTGGTCACGAAAAATACTTGAAGACAACTGTATTTGGTATGACTGGACA
CGCCCCTGATTTTGCAATGTTGATGGTCGGTTCCAATGCTGGGATTGTTG
GTATGACTAAAGAGCATTTGGGATTGGCACTGGCACTCAACGTTCCTGTT
TTTGTTGCTGTAACAAAAATTGATATGTGTCCTCCTAATGTTCTACAAGA
AACCATGAAATTGTTATGTCGTATCCTCAAATCTCCTGGTTGTCGTAAAA
TCCCTGTCATCGTTTCCAATAAAGATGACGTCATCGTTTCAGCTACTAAT
TTCTCTTCTGAAAGAGCATTTGGGATTGGCACTGGCACTCAACGTTCCTG
TTTTTGTTGCTGTAACAAAAATTGATATGTGTCCTCCTAATGTTCTACAA
GAAACCATGAAATTGTTATGTCGTATCCTCAAATCTCCTGGTTGTCGTAA
AATCCCTGTCATCGTTTCCAATAAAGATGACGTCATCGTTTCAGCTACTA
ATTTCTCTTCTGAAAGGATATGTCCGATCTTTCAAATCTCCAACGTGACC
GGAGAAAACTTGGATTTGTTGAAAGGTTTTCTCAACCTGTTGAGCGTACG
TGGTCAATACGTTTCGTCCAAACCGCCTCTGTTTCAAATCGATGACACAT
ACTCTGTATCGGATATGTCCGATCTTTCAAATCTCCAACGTGACCGGAGA
AAACTTGGATTTGTTGAAAGGTTTTCTCAACCTGTTGAGCGTACGTGGTC
AATACGTTTCGTCCAAACCGCCTCTGTTTCAAATCGATGACACATACTCT
GTATCGGGTGTAGGTACGGTCGTCTCAGGGACCACCATGCAAGGCGTCAT
CCGTTTAAACGACATCTTGCTATTGGGCCCGGACAGCACGGGAGCTTTTC
AACCTGTACCGATCAAAAGTATACATCGAAAACGTTTACCGGTCAAAGAA
GTTCGAGCAGGGCAAACAGCTTCGTTTTCAATGAAAAAGGGTGTAGGTAC
GGTCGTCTCAGGGACCACCATGCAAGGCGTCATCCGTTTAAACGACATCT
TGCTATTGGGCCCGGACAGCACGGGAGCTTTTCAACCTGTACCGATCAAA
AGTATACATCGAAAACGTTTACCGGTCAAAGAAGTTCGAGCAGGGCAAAC
AGCTTCGTTTTCAATGAAAAAGATCAAACGACAAGACATTCGAAAAGGAA
TGGTACTAGCGGGCCAAGATCTTGAACCACGTGCCACGTGGGAATTCGAT
GCGGACGTGTTAGTACTACATCATCCAACCACCATCAGTGCGAAATATCA
AGCTATGGATCAAACGACAAGACATTCGAAAAGGAATGGTACTAGCGGGC
CAAGATCTTGAACCACGTGCCACGTGGGAATTCGATGCGGACGTGTTAGT
ACTACATCATCCAACCACCATCAGTGCGAAATATCAAGCTATGGTTCATT
GTGGAAGCTTACGCCAGACAGCGACCATCGTCCGAATGGATAAGGAACAT
CTGCGGACAGGTGACAAAGCCTCATGCCGTTTCCGGTTCATGAAATCTGC
GGAGTACATAACTATCGGAACAAAGATGATATTCAGAGAAGGGCGGACCA
AAGCGGTAGGCACTATAACAAAATTACACGAGGAAGTTGCAGGGCGTAGC
ACCCATAATACACGCCAAAATAAACAATTCAAAGCTCTCATGCACCAGCG
TGGAAAGGGCGGTAATCGTAAAACTCCGGCGCAGAATAAGCCGCCACAAG
CAGCCGCAGCTGCAGCTACGGCGTCTGCGAAATAGTTCATTGTGGAAGCT
TACGCCAGACAGCGACCATCGTCCGAATGGATAAGGAACATCTGCGGACA
GGTGACAAAGCCTCATGCCGTTTCCGGTTCATGAAATCTGCGGAGTACAT
AACTATCGGAACAAAGATGATATTCAGAGAAGGGCGGACCAAAGCGGTAG
GCACTATAACAAAATTACACGAGGAAGTTGCAGGGCGTAGCACCCATAAT
ACACGCCAAAATAAACAATTCAAAGCTCTCATGCACCAGCGTGGAAAGGG
CGGTAATCGTAAAACTCCGGCGCAGAATAAGCCGCCACAAGCAGCCGCAG
CTGCAGCTACGGCGTCTGCGAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002_pilon | genome | sc0000002_pilon:3764820..3771994 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1450-1788:340 |
| Aaloc | 1312-1446:731 |
| Aaloc | 1129-1311:1231 |
| Aaloc | 985-1128:1904 |
| Aaloc | 784-981:2760 |
| Aaloc | 607-780:3890 |
| Aaloc | 397-603:4402 |
| Aaloc | 217-393:5037 |
| Aaloc | 106-213:5816 |
| Aaloc | 1-105:7176 |
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