|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000093_pilon:1175737..1178304- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043646 ID=XLOC_043646|Name=XLOC_043646|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2568bp|location=Sequence derived from alignment at sc0000093_pilon:1175737..1178304- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTAATAGGAGGGGGAACTGAAATCAAAGAGCACCTCAGAATCATTTT
TAACAAAATTTCAAACGGAGAGGATATACCCCAAGCGTGGCAACGAGTCA
AAATAAAAAGCATCCACAAGAAAGGATCCTCACTGGAAATGAACAATAGG
AGAGGAATCTTTATTACAAACGTGGTCAGTAAAGTATGGGAAAAAGTGCT
CCTAGAAAAAATGAATGAAACAATGAAAATTGACATAAACCAGAACGGTG
GGCAGAAGGGAAGAGGAACCTTGGACAACTTGATGGCCATACTGAGCATA
CAGCAGATGGCAAAGCATAGAGAAACATACATTGTCTTTGCAGACGCAAA
TAAGTTTTTCGACCGACTTTGGCTTAAAGACTGCATCAATGACTTAAAAG
ATGCAGGAGTGAGAGAAGCTGAAGCTAGACAAGTGTTCGAACTAAACAAG
AAATGCCAAATCATCATTGACACCCCAGTGGGTTCCACACAGGAGATAGA
GATAGGGGAGACCGTGAAGCAAGGAATAATTTTGGGGCCACAACTTTGCT
GTGCATCAACACTGGTGGTGAACAAAGTTGGGCCCGGTATGTATGTATGT
AATGTATGTAATAGTTTATTTCAAGTTGACGAACAGGTAGCAACAAAGGC
TAATAAAAGTCAACGCTACTTTACAATTTGTAAGGTGATTACAAAAAGCC
GACACCGTCAATATAGGTCCGGCAGTTTCTACACGGGCATGATGTAGGCC
TCCACCTCGGGTGAGTTAGGGCGTGTCTAGATTTAAAAAAAAACACAAAT
CCCGAATCCGCGACCAATAGCACCCATTCTCACGGATTCACTTATGGATT
TTTAGATGACCTATACCTTAAAGTTTCAGGACCCAGTGTTACGTAATTAA
ATATTAAGCTAAAAATTAATTATTAAAGAAAGTGTGAATTGTGACGTCAT
CAAATTATGACGTCATAAATCGTAAATTAGCTCTAACTCTATAAGTACAT
GTCATATCGTTGTCAAATTTGGACCAAAGACGCATCTTAATGGTGCCGAA
CTTTTCAATGAAAATTTTTTTGAAGATTTTGATGACGTCAGCAAAAAATG
CAAAAAATCGAAAAGTACAATTTTTTGCTGACGTCATCAAATTTTTCCAA
ATTTTTTATTTCAAAAAGTTACATTTTAGTTAGATGCATCTTTGGTTCAA
ATTTGGGATAGATTTGACATGTATTTTTTATATTGTAGCGATTATACGAT
TCACGACGTCACAAAATTCGATCAAATTATGACGTCATGATTACACTTTC
TTTAATAATTAATTTTTAGGTTAATATTTAATTACGTAACAACCGGGCCC
TGAAACCTTAAGGTATAGAGGTACTTTAGAGCCCTAAGTGAATCTCTGAA
TCTGGCTGCTATTGGTAGCGAAAACTTAGGGTAAACTGTTAGGTTTTTGA
GACTTGCCCTAAGTCACTCGAGACTGCTTAATCTTTTCCTTACAAATACT
AAGATCGACTATATCTCTATACTCATCCGGAATTAATTCCCAAACTTTTG
GCCCTAAAAATGAAAGTGACTCTAAACCGTGAAAAACAGAGTTTATTTCT
CTTGATCTTCTGAAGTAAGGCGTTTTGCGATTTACTTTGATATTTTCATC
ATGTTTGAAAATTTCTTTAGTTAGATCTGATATGTTATTTTTACATTTGA
AAAGTTCTATTGCTAACTGAAGATTTTTTTTGGTGGAATTTGATGGCACC
GTCTTTCTCTAAAAGCTGCTCAAAAGTAGATGTATGATCAGAATACACTA
TCCTCAGACATCTTTCGTGGAGGTGATTTATTTTTTTATCTAGCCTGCGA
ACATGAAACATCCAGACAAGCGAACAATAATTGACTTGACTTCGAAAGAA
GGCATTCATGAGCCTTTGCTTTTTCTTTTGATTCATGTACGGTGCTACTC
TCGCAAGTGCACTGATTTTCTGGCTAGCTTTCTTATAAATCGTGTTAATA
TGTGCCTCAAAAGTCAGACAGTTGTCAAAAGTTAATCCTAGGATCTTGCC
TTAGTTGCTGTTAGAGATGCGTTCATTCTGTATAGTAATGAAGATTTCTT
TGCTAGTATTGTTAGCTATCAACTCAGACTTGTCTGCATTTTCTTTCATT
TGATTTTGGGTTATCCATTCAAAGATGATAGCAGCTCCATTCGAGAGCTC
CTCACCAACCTGTTCCCAAGAGTATGGCTAAAAGTGGAGTTTGTGTACTC
TTACCTTTTCTATATCCAAATTGTCTATTGCTCAAAATGTTGTTAAAGTA
GGTTGTGATTTTCCCGACTTCCTCTTTCGTTGTTGGTATAAAGGAAAATT
TATTTAGATATTCAGTTTTCTTGATTTCAGTGACACTTGGGTGCGGTATG
GTAACATCAATGGCACCAGGGCTACAAGTAAATGCGCTAGCTTACGTAGA
TGACATTGCTGGTGCAGATTCTAAACTGGCAGCAGAGAACACTTTGAAAG
CACTCAAGGAGATGGATGAGACAAAAAATTCCCCTTCTCGACCTCAAAGA
CGAAAATACTCCACATAG Coding sequence (CDS) from alignment at sc0000093_pilon:1175737..1178304- >XLOC_043646 ID=XLOC_043646|Name=XLOC_043646|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1548bp|location=Sequence derived from alignment at sc0000093_pilon:1175737..1178304- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTAATAGGAGGGGGAACTGAAATCAAAGAGCACCTCAGAATCATTTT
TAACAAAATTTCAAACGGAGAGGATATACCCCAAGCGTGGCAACGAGTCA
AAATAAAAAGCATCCACAAGAAAGGATCCTCACTGGAAATGAACAATAGG
AGAGGAATCTTTATTACAAACGTGGTCAGTAAAGTATGGGAAAAAGTGCT
CCTAGAAAAAATGAATGAAACAATGAAAATTGACATAAACCAGAACGGTG
GGCAGAAGGGAAGAGGAACCTTGGACAACTTGATGGCCATACTGAGCATA
CAGCAGATGGCAAAGCATAGAGAAACATACATTGTCTTTGCAGACGCAAA
TAAGTTTTTCGACCGACTTTGGCTTAAAGACTGCATCAATGACTTAAAAG
ATGCAGGAGTGAGAGAAGCTGAAGCTAGACAAGTGTTCGAACTAAACAAG
AAATGCCAAATCATCATTGACACCCCAGTGGGTTCCACACAGGAGATAGA
GATAGGGGAGACCGTGAAGCAAGGAATAATTTTGGGGCCACAACTTTGCT
GTGCATCAACACTGGTGGTGAACAAAGTTGGGCCCGATGCTAATAGGAGG
GGGAACTGAAATCAAAGAGCACCTCAGAATCATTTTTAACAAAATTTCAA
ACGGAGAGGATATACCCCAAGCGTGGCAACGAGTCAAAATAAAAAGCATC
CACAAGAAAGGATCCTCACTGGAAATGAACAATAGGAGAGGAATCTTTAT
TACAAACGTGGTCAGTAAAGTATGGGAAAAAGTGCTCCTAGAAAAAATGA
ATGAAACAATGAAAATTGACATAAACCAGAACGGTGGGCAGAAGGGAAGA
GGAACCTTGGACAACTTGATGGCCATACTGAGCATACAGCAGATGGCAAA
GCATAGAGAAACATACATTGTCTTTGCAGACGCAAATAAGTTTTTCGACC
GACTTTGGCTTAAAGACTGCATCAATGACTTAAAAGATGCAGGAGTGAGA
GAAGCTGAAGCTAGACAAGTGTTCGAACTAAACAAGAAATGCCAAATCAT
CATTGACACCCCAGTGGGTTCCACACAGGAGATAGAGATAGGGGAGACCG
TGAAGCAAGGAATAATTTTGGGGCCACAACTTTGCTGTGCATCAACACTG
GTGGTGAACAAAGTTGGGCCCGTGACACTTGGGTGCGGTATGGTAACATC
AATGGCACCAGGGCTACAAGTAAATGCGCTAGCTTACGTAGATGACATTG
CTGGTGCAGATTCTAAACTGGCAGCAGAGAACACTTTGAAAGCACTCAAG
GAGATGGATGAGACAAAAAATTCCCCTTCTCGACCTCAAAGACGAAAATA
CTCCACATAGTGACACTTGGGTGCGGTATGGTAACATCAATGGCACCAGG
GCTACAAGTAAATGCGCTAGCTTACGTAGATGACATTGCTGGTGCAGATT
CTAAACTGGCAGCAGAGAACACTTTGAAAGCACTCAAGGAGATGGATGAG
ACAAAAAATTCCCCTTCTCGACCTCAAAGACGAAAATACTCCACATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000093_pilon | genome | sc0000093_pilon:1175737..1178304 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 589-774:187 |
| Aaloc | 1-585:2569 |
|
