XLOC_043643 (mRNA) -

Overview
NameXLOC_043643
Unique NameXLOC_043643
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000100_pilon:1117452..1118247+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043643 ID=XLOC_043643|Name=XLOC_043643|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=796bp|location=Sequence derived from alignment at sc0000100_pilon:1117452..1118247+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAGATGATTTCACGATGAAGTTGCGACAATTCACGGAAGAAGAACT GGACCGAGTTTACAATGAAGATCAATTATATTTCATCGAAGACAATTGGT CGACCATCATCCATGATGATTACTTCACAGCACGAATGAAAGAACAACAA GCTGTCATTTGGGAAATGATCAAAACTGAAAGTAATTACATTTGCAGAAT GAAACTTATACTTATGGTGAGTCACTCATAAAAACTCTGTGTAACATTAT GAAACCCCACGTCATAAACACTCTTTCAGTAGGAAAAATTATCCAAGCGA CCATAAATTCCCGTCATCGACAAACTACTGTACACTGAATTCCCATCATC GCTCtactgttaaaaaaaataaaagttgctCTCATTCCAGTTTTGCACTT TCTTTGGTGGTTTCAGTCTTGTATCATTATAGTGTATTGGCTAAGATGTA TACTGAGCCCCGATCCCATCCGCGGTTTGTGTTATCATAAGGGAGACTTA CTTCACTCAATAGTTTTACTTATTACGATTTTTCTCTTTCCATCCATCAC GGTGGCCTAAAGTTTAATTCTTTTCAACGCACCTTGACGTTTCaggtttt tcaacaaatttttcgaATTGCACAACGAGAAGGCGAACTCACCAACATCA AACGAGAAGAAATCTTCGCCAACATCGATCAAGTCTTTCTGGCCAATGAT GAGATATGGAAGAAATATTTCATTGAAATCGTCAAAAAAGCTCGTATCAA AAGAGGACCAATCAAACCCAGTGAATTATTGGCCCCTTTTCATATG

Coding sequence (CDS) from alignment at sc0000100_pilon:1117452..1118247+

>XLOC_043643 ID=XLOC_043643|Name=XLOC_043643|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=834bp|location=Sequence derived from alignment at sc0000100_pilon:1117452..1118247+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAGATGATTTCACGATGAAGTTGCGACAATTCACGGAAGAAGAACT
GGACCGAGTTTACAATGAAGATCAATTATATTTCATCGAAGACAATTGGT
CGACCATCATCCATGATGATTACTTCACAGCACGAATGAAAGAACAACAA
GCTGTCATTTGGGAAATGATCAAAACTGAAAGTAATTACATTTGCAGAAT
GAAACTTATACTTATGATGGTAGATGATTTCACGATGAAGTTGCGACAAT
TCACGGAAGAAGAACTGGACCGAGTTTACAATGAAGATCAATTATATTTC
ATCGAAGACAATTGGTCGACCATCATCCATGATGATTACTTCACAGCACG
AATGAAAGAACAACAAGCTGTCATTTGGGAAATGATCAAAACTGAAAGTA
ATTACATTTGCAGAATGAAACTTATACTTATGgtttttcaacaaattttt
cgaATTGCACAACGAGAAGGCGAACTCACCAACATCAAACGAGAAGAAAT
CTTCGCCAACATCGATCAAGTCTTTCTGGCCAATGATGAGATATGGAAGA
AATATTTCATTGAAATCGTCAAAAAAGCTCGTATCAAAAGAGGACCAATC
AAACCCAGTGAATTATTGGCCCCTTTTCATATGgtttttcaacaaatttt
tcgaATTGCACAACGAGAAGGCGAACTCACCAACATCAAACGAGAAGAAA
TCTTCGCCAACATCGATCAAGTCTTTCTGGCCAATGATGAGATATGGAAG
AAATATTTCATTGAAATCGTCAAAAAAGCTCGTATCAAAAGAGGACCAAT
CAAACCCAGTGAATTATTGGCCCCTTTTCATATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043643XLOC_043643-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100_pilongenomesc0000100_pilon:1117452..1118247 +
Properties
Property NameValue
Aaloc217-417:596
Aaloc1-216:1