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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000010_pilon:889472..895853- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043639 ID=XLOC_043639|Name=XLOC_043639|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6382bp|location=Sequence derived from alignment at sc0000010_pilon:889472..895853- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATCTTCCAAACGAAAATTGAAAGTGAAGAAGAATTCGTCCAACGA
GGAAAACGTCAAAAAACAGATTATGGATCTCAAAGAAGTTTTATCTCCAC
TATCCTACCCTGATGATGTGACAGAAAAGATCACTTCTGCTTTCAGGTGA
GAGACTTTTATATTTTTTTACTCGGAAACTTCCGCAAATTTGAGAGACCA
CCAATTCTTTTTGTCAATTCTACACTCTATCAGGAGCATAATTTTTAATT
TTGCGCTGATCTAAGAGTACGAAAAACCTGTTTAAGGCCTTTTCTGAATT
CAGATGCTGATCTAGAAACTGTCTTTAGAACTATTCAAAGTTATAATTAC
CTTATGTCTATGCGGCTAGGCAAGCCTGCCTTTTTTCGAGCAAATAAGTT
TGAATAAATGTTTCATTCAAACCTTTAAGGTGTATGTACATTAATTTGGC
TTAGGGCGTGGCGCTGATATTGTTTGATACATATTTCTTTATAAGAACAA
ATTATATAGGAACATAAGGCTTTGATGACCAAAGTATTAAGATCATTTTA
AGGCTTTGCGGACCCTAAACAGCCGATTTCATTGCAAAATTAGAATAGGT
TTAAATTTTAAATAGTTCAGAACATCCTGAGGCTGCAAATAGTTAGGGTG
TTCTTATATTAAAAAACGTTTAATGACTGCCTGCAATTTTTTCTTCTTAG
GGACAAAACAGACTACGAAAATGGTAGGATTTAAATCTTTGCAACAATGA
ATAATAAGTGGACGTTAATGTCACAAGTAAGGTTTCCTGAGACCAAAAGA
AGAAAAAGAATCTCATGCTTTTCATGTTTCGAACAATCAGGGTGAGGTCT
TTTTCAATCGATTTTTGGTGGGTTTTAGTCATCGCATCGCAAATAAATTT
AGACAAGTTTTTCGTGACACCCTGGACCCCTTTTGTTGTTGTACTACTAA
CTCAGTTGAAATACTAGCACTTTTTTCTGAACTACTTTACACATTCGTAT
GTGGACAAGCTTCAAATCTTAGGTATTGCTTATGAACAGTTTGTGTAGCT
TTTGAACCTCGATAAGCAATTTGATCTACTTAACTGTGATGAATTAAATA
TAGAAGAGAGAGAAGTTTAATATCCCAAGGGGGAGAAATCTTAGTGCAAA
TTCTGACCAATAAAAAATGTGCTGCTGAAAGGACTAGATTGATCAAATGG
GCTTTTCCAGAAAAAATTTGAATATGGGGGGTGGAGGATATAACATTCTT
TGGAAATTTACCCCCCGGATATTGTGACTTTTGACCCCCCCCCAGACAGC
AGGGCTAACCCCCTGGACAAGCATCAGTTGACTCCATGGACAATCAAAAT
TACCCTCAAACAGAGAAAGATTACCCCCTGGACAATGCAAATCTTGTAGA
TTTTTCACTACCCCCCGGCCCGGGCATTATATCCTCCATACCCCCCCCCC
ATGTACGGACATTTTCGGGAAGAGCCGAATGCTACCATTCATAACGAACC
TATCATGTTATGAAAATAATGATCAGAAATAAATTTTGACGCTTTATGTT
ATTCTTATTTGATAGGGCTTTTCATAAATTATTTTGAGTGCAACGACTGT
CTCGTTTTAAAACTATTACCAAGGTGATTAAATCCCACAAGTCTTCTTAA
GTGTTACTTTTAGAAATAGAGTAAATTTCTTACGAACTCCTTTGGGATTT
GATTACTATATGCGTACAAACTTTCGCGAGCAGAAAATTCGCGATTTTCG
CGAATTTTAGCCCTTTTCGCGAAAGTAAATGTCTTTAAAAATTCTAGGAA
GGGTCATTCGCGAAAGTTTATGCTCGCGAAAAATTCTTGACAAAATAGAA
AATCTGTAAAACTTTGAATAAAATGTAACTTTTATGGCACTTTTTAGCCT
GCTAAATGACTAAATGACTAGTAAGTCAAAGGACAAATGTTTCAAGCCAA
TCCAAGAAGTATTTGTCCCTCTAAGCCAATTTTTCATGTGAAAATTCTTA
ATTTTATGTCTTGATTTGCAAAAGTTTGTGCACGCGAAAAATATTTTTTC
GTTAAATTTGCGAAAGTAAATGTCGTGGATTTCGCGATTTTTCGTCCTCG
CGAAAGTTTCTGCTCGTGAAAGTTTGTACGCCTAAAGTAACTGAAATTTT
TCGTTCACACTGTAGTGGCTGCAGCACTACAGAAACAAATTTGCCAGGAT
GAGATGGTGGGTGACTCTAGAGTGGCAAGGAGAGCTTACTCCAGGATCCG
CACCTGTCTCCAGGCACCCCCTTGGTGGGGGTGTCTCCATCTCATCTGTT
GTTCATTTTAATTTCACATTTTAACATTAAGATCTTCTGCTACAGCAGTC
TTCATTGCATAAAATCTGCAATTCTAGTCTATTTTCACCCCAAAGACATT
CTACCAGAATTTTTCTCCCACAGCTCTATTCAATTGCACAGTCTTGGGGC
GCTCAAGTCTACCAAATAAATATGCAAATATTGTGCATACTCCACCTCCA
AAGCACAGAAAGTTCTTTTCTTATTTTAATTTTCAATTTTTCACACAGAC
TCTACATATTCTCACCTTTAACTCTCTTGGCCTTGGGATTTTTCCAAAAG
CCGATCAAAATAAACAATTTTACATACTCCACAAAATACTTCACTTACAA
AACATCCTCATTGATATAACTTTGAAACATATTATATTCAACAAACTTTG
AAACCTCAACAATTCTGGTTATTTTCCGTATTTGCACCTAAATTTCAAAA
AACCTTTTTAATTTTATCCCTTCTCCGAATGTCACTTCCTAGGGAGGGTA
CCCATCTTTCCATATTCACACATCCACAAGCAGCATTAGGATAACGATCG
CAAATTTCCCGAAATATCACACCATTCTCTATCCCTTTGGGAGCAATCCT
GAAGTGATGGTCCATGATGGGATATTTTATAAAAAAACGTGAAAGTTTGT
ACGCCTAAAGTACCATAAGCAAACCTTCAAAACGAGGTAAGCGTTGGTCG
TGACGTAATTTACGAAAAGATCTATTAAGCCCTTGTTTTCCATTTAGATG
ACGTCACATTCTGCACAAGGCCTTTTCCACATTGGACAATCAAGAATTTT
GTGAAAGATCTGGAGCTTTTGAAAGAATTGAAAAACGATTTATTAAAGTT
GAAATTCAAACACAAATATACTGACTTGTTCAAGTTTTCACAGGTAAAAC
ACGCAACGTTTTTGTGAGCAGTGCTAGCCCTTCACCAGGCGTTTCAATGA
AGTTCATCTTTTATTGATAAATTTGGGTATTTTAACGTTTTTCAGAATTT
AATTCCAATACTTCCATTTTATTTCATTGGATATTTTCGATTTTGGAGAG
ATTCAGTGGTTAGGCTATATTCTCTCAGCCTTATTGGAACACTTTTGAGC
TTTCGGATCCTGAGATCTGACTGTGTCCCATATTATAACTCAGAGTCAAA
ACATTGCATTCCAGTAGTAACTTAGAGCGCTTAGCACCTTAAAATCATTT
GTATTGTTTTGTAGGGATTCCCCCTTATTATCAAATATAATACGATTTTC
ATTTTAGACATAAAAACATCCGAAGCCCTCCATCCATCTTAGTGTATTCA
TGATATGCACCACTGCAATGACTTCACGAAATGATGCAACTTTTCTGTTT
TTGTTCCACCCAATACGTCACTTTTTCTATTGTTTAAGTGATGTATTGGG
TGGAAAATTATCTGGAAAGTTCTCGGAAGACTCTCCAGTGGTGCATATCA
TGAATACACTAAGATGGATGGAGGACGATACGTCTGGTGACCTTGGACAG
GAATCTACACCTTCTTTTTTCTTTCTGCAGAGTGAAGATATCAAAAATCG
AAAAACACATTCCATATCAACTTTCAGGTTTAATTCATTCAAAATTACAA
CCTTTTTGTCAAGAAATTTCCCGAAATGTTTTCGACTTTTTTGTTACAAT
ATTTGAGTGTATTTTTCCGGGGAAAACAGAGGGTATGTGATGCCAAAGAT
AGAATCTTCCATCAAAATCATATACAGTGGAGTCTCCGTAACTCGAATGT
CTCCGTAACTCGAACAAGGTTTCATGGTCCCTTCAATTAACAATGCCTTA
TAAACCTTATTCCATATCTCTTAATTCCCTTAACTCGAACAAATTTAGGT
TCCCCGTTCTTTTTCGAGTTATAGAGACTCCATTGGATTTCTATGACAAG
TTCTATGACAAAAAAGTTACATTATTTAGAGTTTCATACTCCCAGAAATT
GTTAGATGGTGAACAGGTTATTTCTTCAATAATCCAAACCAATTTTTATA
TAGATTTAGTACAATTCATATTTTTTAAAGTTACAATTTACAAAGAACTT
TCAGTGCAGTATAAAGAGAGGTATTTTCCGTCTCCAAATTCAACAAAATT
CTGCAAAATTTGAAGAATCTTGCTAATTTGCAAGTCAATTTTCGGCTGAT
ACAAAAAACTTTACTTTGACCTCACGTAAAGTAGAGATATTCGTTCAATT
GAACATTCTTCTTATAGGGACTGTTTGTTTACACAATTTCGAGGATGGTT
AGAAAATGTTTTGGATAGGAAAATGTCGGATGCGATAGATATGTCGTGCG
CTCAATATAATTATACAGGTACGATTCAACTTTCCATGAAAATCTAAGTA
AAAGTAATAGTAATAACCTCGTTAATTTCCACTTGGGTTGGGGCACTCAA
GGCATGGATTTAAAACAACTATAAGGTACGATTTAACTTTTCCATGAAAT
TACAAGTGTATATTTTGTCCCGAAATCAACCTGGGAGTTTTGCCTTTAAA
AAAACAAATAGTAATTCTCAAGATAAGCAATGTTCCGTAAGTGCAAAATG
AGAAAAAATGAAAAAAAAGTGCACAGGGTTTAAAGAGTGAGCAAAATTTT
AGAAAGATCTAACCAATTTGTGCCTTACAATGGACCAAAACTTTCAAGCA
CTGCTATGCAAATTTACTAGAATTTGGCTAAATTTTGTTTGCGTTGTAAG
GGTCCAGTTTTGAGACCCTAATTTTTGTCCTCGGTATTTTTTTACTACAG
CAACAGAAACATTTTTTTTCAGATTTCTTACTGTGTCACGACGATAAAGT
TGAAGATCGACAAATTGCGTTCATTTTTTATATGGTGCCCGATGATTGGT
CCAATGAAGACGGGGGTATGTTGTTTTATTAATTTGAAAGCTTTTTGATA
TTGAATTGACACGGATGTGGAGCAAGATTGGTCAGAAAGAGGAAAAGAAA
AACTTTTTTTGCTTATATCAGCACAATATAACAATAGGGCGACACTGCCC
TGATATGAAACGGGAACACTTTTTATGTGAAAATAAAACTTTTACTGAAT
GCATGTCTTATTGCATATTTCTCGTCATTCCCACGTGGTTCTTGATTTTG
TTGATCCGAACCATGATGCGAAATGGTTTTAAAGCAACCCACGTATAGAA
ACCCCCTTTTGAAGTGAAACTGTGGGTGTGATTTTGTATAATGATTGATT
TCGTTTTTTCAGGAAGATTGGATCTATTCAACAATAAAGGTATATATCAT
TTCAGCTCCTACATACTAGCTTTTGAGAAATTACTCCATTTTATTGTTAC
CCTAATTTCAAATCTTACTTTGAAAAGTTCTTTACTCTAGTTTATTGATA
CCCTCATAAATCTTCATTTTCAATACAGTTTTCAAAGATTTTTCGTAAAA
CTTTTTCAACAACATTCTTATATTGTTACTTTCAGAACTAAAGTGGGTCA
TGTCTGGCCAGTGTTTTACGAGTAATTCAGTTTTGCACGGTGTCATGTTT
TGTTTTTTCAGATGGTCAACCTTCAGATTTACACAAATCACTGATTCCAT
CTTTTAACTCTTTGGTATTTTTCGAAGTCAGCGATACATCCTTTCACCAG
GTGAGAAGGTTCTTTCTGACCTCTCTTGGCCTGGTTCCTCTCTCGCCCTG
GTTTCGCCAATCTCTAAATTTGATTAATGTTCCAGCGCCTGGCATCACCT
GTATGATGAACTACCTCTTTATGGAACTTTCTACAATTACCTTAAAATGA
GAAAAATCGGTGGATTTACCTGGTCAAACTCCTACCAAATTTATTAATTT
ATCCGTGCTTTTTTAGGCTTTTAGTTTATCTAATAACGATTTTCGGCTAA
AAATATCCTGCAAACACACGACCAACCATCCGCCGAATTAAATTCCTGCC
CAGATTTCTTCCTTTCAGGTAAAAGATGTACCAACTTTGACTCTCCTTAG
GTCTCCGAAGTGTTATCGAACTCGAAGACACGTCTCTCCATCTCGGGATG
GTTTCATTCGACCACTGATCCGCATTTTAAACTTTTCAAACACGTTGAAA
CAATCACAAAAACACCGCCACTAGATTTAGAG Coding sequence (CDS) from alignment at sc0000010_pilon:889472..895853- >XLOC_043639 ID=XLOC_043639|Name=XLOC_043639|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1608bp|location=Sequence derived from alignment at sc0000010_pilon:889472..895853- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATCTTCCAAACGAAAATTGAAAGTGAAGAAGAATTCGTCCAACGA
GGAAAACGTCAAAAAACAGATTATGGATCTCAAAGAAGTTTTATCTCCAC
TATCCTACCCTGATGATGTGACAGAAAAGATCACTTCTGCTTTCAGATGT
CATCTTCCAAACGAAAATTGAAAGTGAAGAAGAATTCGTCCAACGAGGAA
AACGTCAAAAAACAGATTATGGATCTCAAAGAAGTTTTATCTCCACTATC
CTACCCTGATGATGTGACAGAAAAGATCACTTCTGCTTTCAGGGACAAAA
CAGACTACGAAAATGGGACAAAACAGACTACGAAAATGATGACGTCACAT
TCTGCACAAGGCCTTTTCCACATTGGACAATCAAGAATTTTGTGAAAGAT
CTGGAGCTTTTGAAAGAATTGAAAAACGATTTATTAAAGTTGAAATTCAA
ACACAAATATACTGACTTGTTCAAGTTTTCACAGATGACGTCACATTCTG
CACAAGGCCTTTTCCACATTGGACAATCAAGAATTTTGTGAAAGATCTGG
AGCTTTTGAAAGAATTGAAAAACGATTTATTAAAGTTGAAATTCAAACAC
AAATATACTGACTTGTTCAAGTTTTCACAGAGTGAAGATATCAAAAATCG
AAAAACACATTCCATATCAACTTTCAGAGTGAAGATATCAAAAATCGAAA
AACACATTCCATATCAACTTTCAGGGACTGTTTGTTTACACAATTTCGAG
GATGGTTAGAAAATGTTTTGGATAGGAAAATGTCGGATGCGATAGATATG
TCGTGCGCTCAATATAATTATACAGGGACTGTTTGTTTACACAATTTCGA
GGATGGTTAGAAAATGTTTTGGATAGGAAAATGTCGGATGCGATAGATAT
GTCGTGCGCTCAATATAATTATACAGATTTCTTACTGTGTCACGACGATA
AAGTTGAAGATCGACAAATTGCGTTCATTTTTTATATGGTGCCCGATGAT
TGGTCCAATGAAGACGGGGATTTCTTACTGTGTCACGACGATAAAGTTGA
AGATCGACAAATTGCGTTCATTTTTTATATGGTGCCCGATGATTGGTCCA
ATGAAGACGGGGGAAGATTGGATCTATTCAACAATAAAGGAAGATTGGAT
CTATTCAACAATAAAGATGGTCAACCTTCAGATTTACACAAATCACTGAT
TCCATCTTTTAACTCTTTGGTATTTTTCGAAGTCAGCGATACATCCTTTC
ACCAGATGGTCAACCTTCAGATTTACACAAATCACTGATTCCATCTTTTA
ACTCTTTGGTATTTTTCGAAGTCAGCGATACATCCTTTCACCAGGTCTCC
GAAGTGTTATCGAACTCGAAGACACGTCTCTCCATCTCGGGATGGTTTCA
TTCGACCACTGATCCGCATTTTAAACTTTTCAAACACGTTGAAACAATCA
CAAAAACACCGCCACTAGATTTAGAGGTCTCCGAAGTGTTATCGAACTCG
AAGACACGTCTCTCCATCTCGGGATGGTTTCATTCGACCACTGATCCGCA
TTTTAAACTTTTCAAACACGTTGAAACAATCACAAAAACACCGCCACTAG
ATTTAGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000010_pilon | genome | sc0000010_pilon:889472..895853 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 673-804:133 |
| Aaloc | 586-672:570 |
| Aaloc | 559-582:869 |
| Aaloc | 466-555:1309 |
| Aaloc | 364-462:1865 |
| Aaloc | 316-360:2553 |
| Aaloc | 172-315:3334 |
| Aaloc | 148-168:5682 |
| Aaloc | 1-144:6383 |
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