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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000145_pilon:596886..600906- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043638 ID=XLOC_043638|Name=XLOC_043638|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4021bp|location=Sequence derived from alignment at sc0000145_pilon:596886..600906- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGAATTTGTGACCAAACAATTGAGCATTGCTTCAACATTGGATAGTGT
TGAATTCTTTTTGTATGATTCAGCTGGCAAAGAAGAATTTGGTGATATTG
TTGACGTTCATGTATGTAATGTAATATATAATTGCCCAAATTTGAACCAA
AAAGCAATTACTTGAATTGCAAATCTAAAAAAAAGTAAAAGGAAATTTGT
CCCTGTTACACGTTTTTTATAAGAACATCCAAAATATTTGAAGCCTTCGG
ATGTTTTTAACATGCTCTTATTTTCACCATTTTTTTAGCATTTTCGTCCA
TTTTTCTAAAAAATTGGGTATTTTAGAGTCTGCACAACCTTAAAATGTCT
TAACTTGTTCTTAACATTTTGGTCATCAAAGCCTTATGATTTTATATAGT
TTGTTCTTATAAAAAAACATATATTTGATTGCAAATACCTTGCTCATCTT
CTTCAGATGAAAGATGCTAAGATCATTGTTTTGGTTTATGACGTCACAAA
TATAGATTCTTTTGAAAACTTGTCAGAATGGTATAAGAAACTAGAGGCTG
CCAATAATGGAAAAACTTTACATGGTAAGAGAATTCTTTTTCATTTTATC
ATTACCTTCTTAAATATCAGACGAATAGGACATTTTTCGATAAACAGTTA
ATTTCTAGGTAAATTTAGGCTCTGTTCTGAATTTAAGTCCGTCCGGCTTT
AACTGGATATTTGTTTTTTTTACAAGCACTTTATTTTCATGTTTGTTTTG
TCAAAAAGAAATGGTTTGTACTTTTAAAGAAAGACATTATAGCTACTATT
ATCTAAAAGAAACTGGACGAAATATAAATAAAGTCGTTGATACACTTTAA
TTGTTATAAAACGTCAAAATCCCTTCAACTTTAATGTCTTCCACTGACCC
AACAGCTGGTTGGTTGAAAGTGACGTAAAATCAATCAATACGTCACTTAC
AACCAATCCACTGTTAGGTCCATGTTGTAATGTAAGAAGACATTGTAATG
GTGCATATCATAAATAGGAAAATAAACATTTTTGTTTCTTCTTCATCCTC
AGGTGCTATTATAGGTAACAAAGTAGATTTAACAGATCGCCAAGTGGTGA
CCAGTGAGATGGGACAAAATTTGGCTGACCAATTACATCTGCATTTCTTT
GAATGTTCTGCTGTAAGAATTTTTTCTTGTTTACTTTTTAATCGGATCAA
ATTTGCAAGATTAAATTTCGCGAAATTTTCTGGATTTAATTTTGCAAGTC
ACAGTTTTGAGAAATTTTGCGTGGATTTAATTTCGCGACTAAGCCAGAAA
ACAGCTGAAAAAAAGCCATTTTTGCCACAAATGGTTTTCCGCCGAAAATG
CAATTTATTAATCCTATTAAAGTATTTTCCTATTTTCGATAAAAACTGTT
CTTTTATATAATATGGGCTATTCGGTGGTTCCCAGGGAAATCTCGTAATT
TTGATGGTATTAATTTGCTCTCGGGAAAATTCGTACTTTTCTATGCAGTT
CCCGAAAGGCGGTTGGGTTCAGGGTGACTCCACCATTCTGTCAATTTTTC
CCCAGTATCCGTCACATCCAGCGTCAAAACGCGAGTTTTTCGCCTAAAAT
TCCATAAAGCTTAAATAAGACTGCTTAACCAAGATTTACGGCTTTAATCA
ATTTTAAAACCCTTTATTTGTTAAGGAAAATGCCATTCCAAGATGATAAA
TTTGCTGTATCTAGTTCAGTTGACCATTGCTTTGAAACTTTGAAGTTTCA
AGGGCTGATGATTATTTTCGGCAAAAAATTTTTGTGAAAATTTTTTATAG
TTTGCCTGGGGAAAAAAGGGAAAATTTGGAATTTTACTAAATTTTGACCC
TTTTTAAGTCTGGGACCTACCCAAACAATAATGAGACACAAACTAGGTGT
TTTGATGATGCAATACTCAGACAAATTTCAAACCAGTATGTAGTAATTTC
AGGGCTCAGGGGTAAAATTGCCCATTTTTATGGGTTTTTCTTATTTGAGC
AATTCACCACTAATCTTGGTTAAAACGTTATCAAAAATAGTTTTAACTTC
ATTTTCGTAATATATCCTAAGATTACAATGCTGACTTTAACAAACCAGGG
GGCAAATCGGGTAAAAATGCCCATTTTAGGCGATTTTTATCGTTTTTTGA
CCTATTTCACCCATAAAGCGGTTGGTGCAATTTTATTTCTCATGAAACAA
GGATAATTCTGTAGTAAGAGCAATGGGAAAGTTATTTGTGGCTTTCATTA
TCTGTAATCAGGGTCACTGTGGGCAAATCAGGGGGTAAATACACCACTTC
TTGGTAGTTGTTGCCTGAATTTGGATGTTATTATTGTATGGTAGCCTCAA
ATTTATGAAATTTTGAGATGGAAACCAGTTATATACCCTTCAGTCATTTC
TTAGTACTTTTGTTGACAACTACACAAAATAATGACGGATTTAAAACTTA
AGTTATGGCCAAACGATAACATTTTATTTGACGTAATTTTGTCAGTCTTT
GCTCATCCCTGGAATGGCATTTTCCTTAACAAATCCTTACAAAGGGTAAA
AAGTACCCCCTAAACTTGTGCCCAGTATGAAAAATTGACCAGGAGTTAGC
TTTGGGGACCGACCATTTCCAAAATTAGGATAGTTGAGAATTCCAAAAAT
GTATAGTTTATTCTGTAGAATCTTGGGTTAAGCAAAATGCCATTTTTTGG
GTTTGGCTCCCGGACTATAGATTTTGACTTTTCGGTGCCAATCACCAAAT
TCCTACCGATTTTTTGCTCTCAAATCTAATTTTCTGGACAAAAAAAACCC
AAATCGTCCGTCTCCGACAAAGGATCTAAATTCCACTATTCTCTCCAGAT
TGTCAGTGCAATCCGCCATTCCGGACAAAGAAAAGACATATTCTTCCCCT
CTGTCAACCTTAAAACCTTAAAACATCTTCTCTAACCAATGACTATCTTT
TTAGGCTTTTGATTTCAAAGAACATTTTATTGGTCATGGGCTTAGGATTT
CAATTATAGTAGACTCCCCAGTGCCGTAGCTACCCCGTGGTATTGCCTCC
CCCAATAATTCTTCCAGAAATGTTTTTTTTATGAAATGGAAAATTGTTCT
TTTAAAAATTTATTTCTCCAAATAAAACTTTATTTTTAGTGCATTTTCCA
GCCATTTTTTGCGATTCAATTTTAAAAATTCCCCCGTCGGGTTAAACCAT
GGTTGGCCCTCGCGGTGTCACTAAACCTCACCCCCCCCTCTAATATCAAA
ATGCACTGCTCCCTGGTATTCGAACATCCGGGTACTCAAAATTTCGGTTA
TCTGAAGTAAAATGGAATTCCCTTGGAAAACACTCTCTTTTATTCTAAAG
TAGAGTTATTTTAATTTTCAGATTTTCAATAACCCCTGTTGAGCAAAATT
CGGGCCAAGCTTCCCTCAGTTATTCAAAACTAGAATATAGCCACTGAATA
TAAAATTGCCTTTTCTGAGACCTTTTTACCTGTAAATTGCCAATCATATC
CTAGCAATACTCAAAACTTCCACAAAAATGCCATAGTTTTGTTTGAAGCA
TGATAAATTAAGGTTTGGTTTGGGTCTAAACCTAGGCATGCCATGAAAAT
ATCTCAAGATAAATTTTCCCTGAAAAACTTAAGATTATTAAGTAGATTTA
GAGTAGAGTAGATTTATTTGAATTTTCAATTTTTCAAAGAGGTTTCTAAC
CCCTGTTTTCAAGATTTGAAATCTGAATGAATTTTCGCTGAAAAACGTAA
GAATATCTAGGTATGATAAAATAAAAACACGCCACTCTTATAAGAAAAAT
GAGTGTACCGTAAGTAAGATTTTTAATAAACATTGTTTGCTGGTTTAAAA
TTATATGTCATTTCAAACTCAATTAGTTCCAGATATCGGATTAAAAAAAA
AAAACAATACTAAAATTAATTTATTTCAAACATTTTATAGAAAGATATGA
GGAATATTGATGCGCCATTTCAAACAATTGCAAAAGATTATTATGATCGA
GTCAATGAAGTACCATCTTGA Coding sequence (CDS) from alignment at sc0000145_pilon:596886..600906- >XLOC_043638 ID=XLOC_043638|Name=XLOC_043638|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=840bp|location=Sequence derived from alignment at sc0000145_pilon:596886..600906- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGAATTTGTGACCAAACAATTGAGCATTGCTTCAACATTGGATAGTGT
TGAATTCTTTTTGTATGATTCAGCTGGCAAAGAAGAATTTGGTGATATTG
TTGACGTTCATGTTGAATTTGTGACCAAACAATTGAGCATTGCTTCAACA
TTGGATAGTGTTGAATTCTTTTTGTATGATTCAGCTGGCAAAGAAGAATT
TGGTGATATTGTTGACGTTCATATGAAAGATGCTAAGATCATTGTTTTGG
TTTATGACGTCACAAATATAGATTCTTTTGAAAACTTGTCAGAATGGTAT
AAGAAACTAGAGGCTGCCAATAATGGAAAAACTTTACATGATGAAAGATG
CTAAGATCATTGTTTTGGTTTATGACGTCACAAATATAGATTCTTTTGAA
AACTTGTCAGAATGGTATAAGAAACTAGAGGCTGCCAATAATGGAAAAAC
TTTACATGGTGCTATTATAGGTAACAAAGTAGATTTAACAGATCGCCAAG
TGGTGACCAGTGAGATGGGACAAAATTTGGCTGACCAATTACATCTGCAT
TTCTTTGAATGTTCTGCTGTGCTATTATAGGTAACAAAGTAGATTTAACA
GATCGCCAAGTGGTGACCAGTGAGATGGGACAAAATTTGGCTGACCAATT
ACATCTGCATTTCTTTGAATGTTCTGCTAAAGATATGAGGAATATTGATG
CGCCATTTCAAACAATTGCAAAAGATTATTATGATCGAGTCAATGAAGTA
CCATCTTGAAAAGATATGAGGAATATTGATGCGCCATTTCAAACAATTGC
AAAAGATTATTATGATCGAGTCAATGAAGTACCATCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000145_pilon | genome | sc0000145_pilon:596886..600906 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 340-420:82 |
| Aaloc | 232-339:2968 |
| Aaloc | 112-228:3566 |
| Aaloc | 1-111:4022 |
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