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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000145_pilon:608482..616320- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043637 ID=XLOC_043637|Name=XLOC_043637|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7839bp|location=Sequence derived from alignment at sc0000145_pilon:608482..616320- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTCTGAAACAATAACAGATATGAAGGGCAATATTGTCAAAATGGA
AGTGGATTACAGTGAAACTTGCGACAAGAAACTTCCTGAACTTGAAGAAA
TGGCTAAGGTAAAATAGATTGTGTGTGATTGTATTATTTCACCCAAGATA
TATCTATACCTAATTAGGAATTTCTACTTTGAATATGTTGCCTTTTTAAT
GATGATCCAGTGGATAGAAATGGTGGTATCAGGTCTAACTTAAGATGCTA
TTTTAAGATGTTCTAAAGTCTGCTTTCAATGAAAATGTATCTGTTTTTAT
GTGAGATATCATAATTCCTTTGCCTGTCAATAGCTATTTTGTTTTTCTTT
TAGAGCGGTAAAATTGAAGATGCATTGGAAGCTTTATTAGCTCTTGAAAA
ACAAACAAGAACGGTATGTTTTGTATGATTTTGACATGGGTTCCTTTTCA
CCTCATTTATAGTTGCCTTGTTTTGTTTCAGTTTATTGTTTTTTTTTCGT
CTGCTTTTTATTACATTAACAACAAATGGCTTGTTGTGTATCATCAATTG
AGAACCCTCCTTTCAAAAAGCAGTTTGTTTTTAATACGAGAACAAGTTTT
TTTCATAAGTTCTCAAGACTCTTCTGAAAACTGGCTGACATTTTTATATT
TTCACATAAAAGTACAACCTGAAAATCTTTAAAACAACATTTTGGATTGA
AACAAGCTAATTCTGAGCTATGACCCTGTTTGTTGGTGGAAAGCTGGTAA
ATACTTCTGTTCATAAACTCTTTTATATCTTCAAGTCTTTGGACTTTAGG
GTATTCTTTTAAAAATGTTCACTATTTTTAGGCAGCTGATATGTTTTCCA
CAAGTCGTGTTCTAGTTACTGTCATCAAGATTTGTTTTGCCACAAAGAAT
ATCGAACTACTCAATGAACATCTGTTGTTATTGACAAAACGAAGAGGACA
ACTCAAGCAGGTGAGTCAATTATTATCCCAAAGAATCGCATGAATAAATT
GCACTCTTTAGCTGAAATGTCTTTCCAACAAGTTATATGATTTTTATGAT
ATTTTCTGTTTCTTACCTTCTATACATAGAGATTACAACTTACAAATCTT
TTTATGAAGTCAAGCCCGTTGCATGTTTGATAGTTCTAGTTCTAGTTCTA
TTGAATTATCACATAATACATTACGTACATTTTCGTGATTTTATACATAA
AGGATAAAACAAAATAAAAAGTTAAAAACATTAGTGCAGGATGTTCTAAG
ACGATATGACGGCGTAATAGTAATAGAGGCTCGATTTACACAGGATTATG
GAAACCCATAGCCTAAGATACTAAAGTATACTATAATATTATTGCTCAAC
AAGTATTATTCATTCCACAGGCTGTGACAAAAATGGTACAAGAAGCATGC
ACGTATGTTGATCAAATCGAAAAGAAAGAGGACCAATTAGAATTTATTGA
CACACTTCGTACAGTCACGTCCGGAAAGGTTAGTTTCCTCGATATTTTTC
ACTTTATTTGTAAAGGTTACAAATAATCACTTACATAGCCATTCTAAGTG
TCAAAATAGCATGACAGTTATTTAGGCAAATGCACGCACTCTTGTTATTC
AATTTGAACATTCCCTTTCAACCACGAAGGAGCTTTGCCTCGAACAAACA
CAAACACCATTATATGAATCACTTATTTTTAATCATCCACCTTATACTAG
TTTCATGTCATGTAAAAAAACTGTATTTCATTTTCATTGTTATCGTTAGA
TTTATTTGGAGTTGGAGCGTGCAAGGATAACTCGTAAATTGGCTCAAATG
AAAGAGGCTGACGGAAATATTGCAGGTAATTTCGTACGCTCTTCTCTCAG
TGCACCTTCCTACCCTTTAGTGTGAGGAAAAAGCGTGAGGAAAATGGTTT
AGACTTTTTTGACCTCAAGTTTCAAGTTTTTGCATTAGTTTTCTCATAAA
CATACAGGGGTTTTGCTTTGTTTTTGGTAGGCTGGTGAATGAAAAATTAA
CTCTGGCGACTTCTAGATTCTAGACCGGCGAATTCTTAGCAAGCGCAGTG
TATTGATTAAGCGGGATTAAGCCGGGCCTAAGTAAGATCCCTGAACATAG
CGTCATTTCTTCCTGGTAAAACTGGAATTAATATTAGTTGGTGGCGTGTA
GCAATTATAGGTGTATTAAGGACAGGTCCAATCTTGCATCAACCCAGGAG
GCAATCTTTAAATCACACGTTGCTTTTTGACCCACCTTCTTACAATCCAT
TCTCTCTAACCAAAACACCACTCAAATACGAAGAATCCCATTAGAAGTTT
CCTCAGCTAATATTTAGTATTTAGTTTATATTATATTTAATTTTCGTGCC
AAAAACAATTGGTAAAGAAAGTTTGCGATTAAAATCTGTCAAATTATAAA
ATCACGTGATTTCAACAGCCTCTAAATGGCAACTACTACTTCTGTCTTCA
CATTTCAATTTACAGGAATAAAACTGTAACTGTAGACAATGTACACCGAG
TCTCTCAGCTACTTTAACTTTCTTGTTTTCCAGATGCGGCAACGGTACTC
CAAGAATTACAAGTGGAAACATTCGGCTCGATGGAAAGGCGGGAAAAGGT
GGAATTTATATTGGAACAAATGAGATTGTGTTTAGCCAAAAAAGATTACA
TCCGTACGCAGATTATCAGCAAGAAAATCAGTACCAAATTCTTTGACGAT
AACAAGGAACAGGTCTGTAAACATCACAAAAAAAACATTACATTTTAAAC
ATTACAGAGCAATCTACATACGACAAACCTCCATTTAAAGTTCGTCAAAA
GTCAATATGGCCTTATTTCACGCCTGTGAAAACATTTCCCATCAAATACC
CTATTTGTTTTGACACTCGCAAACAAAGTGCATATGTTTTCAGTTGAAAA
TTAAAGTTATCTTGAAAACTTGTAGAAGGAAAGAGGCTCAACATCTAGAG
AAGGTGTAAATTTCCCAGCATCTATTTTTTTCCCGAAGAGATTTTAGCGC
AGCGTAAGTAGTGTAGTTGTGTAATAGCTCTAATTTTTACAGGACTTGAA
ATTGAAATATTATCAACTGATGATTGAGCTTGGACACAACGACGGAAAAT
ACTTGCCCATTTGTAAACATTACAGAGCTGTCTTCGATACACCTTCCATA
CAAGAAGATGAAACCAAAATGAAAGAGGTACGTACTTTCATATTATAATG
GTCAAAAGAATGGTGAAGCATTTCAATTGGGCTTTTCCAGAAAAAAATCG
TGCACCCCCTGTTGAGGAGGTCCATTTCCATTCCAAGGGGGTAAGGTTTG
AAATGCAGTGGAATTCCATAGGGGTAGACGAAAATCCGTCAAAAATAAGC
GGAATTCCAAGGGGGTAATGACTAAAAATTTGTAAAAATTCGGAATTCCA
GAAGGGTATGATCCTAAATTTGGTTGGAATTCCAAGGGGGTAGGTCACAA
AAGGTTGGACCTCCTCAACAGGGGGTGCACGGTTTTTTTCTGGAAAAGCC
CATTACGGGACCAATCTAACGTAGAACCATAAATTTTCTTTCAAGTGGGC
GCTATTGTTTTAATCTTGTATCCAAGCTAAGTATTCGAATCTGGATTTAC
ACATGTCAGCTTTTTCAATACCAAAGAAAAAGTTGAAACGTCTATTTAAA
TTCGATATGTCTTTGCAAAAACCTATTCGCTTACCAATTCGAAACTGCCT
TACCTAGCTACCCTCCTCTTAACAGTATTGTATCTATACCCTTCACCATC
CACCGACTAAACCCCATCAAATTATCAAAAGTTGTATGACACAGCAGTGT
AAATCAATTTTTAAATGTTCCCATTTTTGTTTAGTATGTTCTTTGCAATG
ACCAAAGCTTGTTTCTTGTTTCAGGCTCTTCGCAATGTCGTTTTGTTCAT
CGTTTTATCAGCATACGATAACGAACAATCCGATCTTTTATCCAGAATTG
CCGACGAACCAAAATTAGAAAATATCATGTCTTTCAAGTAAGTCAAACTT
CCACGTAGGTAGCAGTACGCCCTTGGGTGTTTTTACATTTACAGGTGGTC
TTGTGCCATAGCAAAGTGTGCCCTGAAAGTGACCAAAATATTGAATCAAT
CATCACCATCAGTCTTTAGTAACCAGTGCAGTGCTAGAACCTATGTATGA
TTTCTTTAATCAGATGAGATATGCTTTCAGTATCAAGTCAGATATATCCT
AGCTTAGAGTATACTTTTCTTTTCGTTAATTTTTGATTGCGCTGATTCCA
GTGATTGAGTTAAGTTACCATTTTGATAAAAAACGATTTCAAAATTTCGA
AATGTTTTTTTGAAGATTTAGAACGGACAACCAACATAAACAACATATTT
GCAAAACCATATTTTTATATAACAATTTATACTTTCTTAAATTATGTACC
TTACAAAGCAAAGGGAATCTGGCGGATGCTTCACGTTCTGCCTAATTTAC
ATGAAAAGTCAAGATGGCGTCGTGTACTGCCAGGCGAGTTCATAGTTTCA
TCCAGTCAATCATAAAGCCTAGGCCTCCGTACAGTACTAGCTTCAGCGTA
AGTATCTTTTTGCTTAAACGTTTTTTTTCATTTGCAGGCGATTGATCAAA
AACTTCACCACGCACGAGCTGATACACTGGGTAAGGTTCAAGGAGCTGTA
CGAAGTAGAGTTGTCTCAAGGAACTGAGGCTAACCCTGCCACCGGTGTAT
TTAACCGAACAACAGAACAAGGACAGAAACGATGGGATGATTTAAAGAAG
AGAGTTGTGGAACATGTAAGTCGCCCACTCAAACTAGTCAAGTTATCATG
TCTAAGATAAGCCCTTTGTATGTCTACAAGCTCGGCATTTTTTGTTCTGT
TTGCTTTTTAGCACGTTCACAAATAGACACGTTACGTTAGTTCACCCTCC
GATACAGTTTAAACCAACCCTTCCGTCATGGTAGTAAGGTTGTTTTGGAT
GCACCGAACGTTCACGATTAAGAGGCAGTTTTTTGATCCCGGCTAAACAA
ATGCTTTGATCGGGGTTTCTTAAATAATGGTACCATCAGTGTACTATGTT
ATGTGAATTTCCCTCAACTTTTTTCTCTCAAACATGAATTAATTTTTTCT
TCAAGCAAAAATGAGTGAAGCCAAAGGAGACGATCGTGGGGTGTGCTTAA
GAAACCTGCCTTCAGACAGCAAACTTTATGACGAATTTACAATTAAGATA
GGCAGATCTGTCTAAAGTTAAGCTCCTTTTAATCCTTTTAAGAACAAACC
CAATTTACCAACTAAGAATCGTCCCTTTACGTAAAGCATTTACGTAACCT
TTCTCTCGTCTGATTTCTAAGGGCATGAAGTTTTTTATGCATATCAATTT
TATAGACCACCTAACGCGTGACTGATTAATATTCTTTTGTTCCCTGATCA
ATTCACTGTTTTTATAGCGTAGGCTACCTTACACTGTTGAGTTTATTTAT
GGGGACATTTCTGGGAATGAGCTTTAAAAGAGCTATTGGAGACAACATGT
TTTTTTTTCTGATGAGATAATCTAATTACGATGCTAAATTAATGTTCATT
TAGAAATGTTCCTGCCAGGTCACTGTCACACATTCCGCCTGACAATAACT
AATTATTTTTGCTTCCTCGAACCTTTTTGTTGTAATCGCACGATGAGTTA
TTTTTTCTTATTTGGCGCTCGTTCAAAGAGAGCAATTAATCGTTAATTGC
ATCCTGTAGAGAGCAATTAATCGTTAATCACACTCTTTGATGCCGCGCCA
ATGTTTACAAAATTAACTTTAATGTATTTTTCTTATATTTTTTTTCATCG
AACGTTTTAATTGCATTCGAGATTCATTTTGAGAGAAAGAAAATCTATAA
AAACAACAATAAAAGAATTACATAGAGAGAAGAGAAAAATATGACTTTTA
GTGGAATTTAATTTTCCTAACGGGGAAAAAGTAGTGCGATTAGCTCGTAT
TCACATAACAACTCGTACAATTCGAAAATTACACTCGTGATTGTTTTGTT
TCGAATTTTCCTCGTCCTTTCGGACTCGGAAAATTAATAACAAAAAAATC
ACTCGTGCAATTATTCTCGAATTGCACTCGTTATCATGTGATTACATATA
CTAACTATCAAATCAACACTTTCTTCTTAGAGCTTACAGTCAGATTAGCC
TTAATTTGTTCTAAGGTGTCGGCCAAAATATTAGCCTCAGTTTTTATAAA
GATTTTCACATGAATAAAAAAAAATTATTTTTCTTTCTTAGAATTTGAGA
GTGATGGCGAAATACTATACAAGAATCACCGTCGAACGCATGTCTCAACT
TCTCGATCTTTCTAAAGAGGTAAGCACTACTGGTCTCAAACGACTGGATT
CGTCCTACCCTAAGATGAAAAGTGTCCTTTTTACAAAAACTCAGTTCAAC
CCATTCTCAACCCTTTTTGGCAAAATTCACCAAAATTAGTTTTAAATTAA
AAAAAGTTGGTGTCCCGCCAAATTAGTTATTGCTATGAGTAAACTACAGA
TTTTAATTTTGATCTTTTAACAGGTATCGTCGGCTGTAATGTGGTTGTGT
ATTTCCTATTAGGTCTAAATTCGTCAGGGGGCTGATGTTATGATTAGGTT
TCCTAAAGCAACAAAACTGTACAAACAGTGGAGTCTCTTTAAGGACATGT
TTTTTTTTGACTGTACCAAAATCAGGTTTTCGAAAATCGTGAAAATCACT
TTTTTTCAATTATTTCGTCATTCGCATGATGAATTTTCCCAAAATTTTGA
TATGTATTGAAATTTGGGAAGGGCTTTAAAATGAGCTATTTGAAATTTCA
AAATTCGGAGTATTTCAGGATTAATTAATCAAGGAGTGTTATAAATCATA
TCTCACTCCATGACTCATTATTCGGTCCTGAGGAGGTTTATATGCATTCC
TGAGGTAGCCTAAAATCATAAAATAGCCTGAGGAGTAATTTTTTCTTTAG
TTCGTTCCTTTATTTCAACTAAACAAAAATCTCAAATCACTTCCCCGATA
GATAGACTTGTCAGGAAAATATATACGATTAGAATTAGCACCTAGATTTC
AAAAATGATCAATTTGATCCCATTTTCCTCCGGTTTTTTCCAGAAAAAAG
AGGTCTATGTGAAAATTCAATCCTTTACCTACACCCTGATATAAGTTTCG
TATATAAATTGGACACGACAAAAGCCAAATATAGAGCCGACTTTATAAAT
CCGAAATAAACTATGATTTTTTTCATACTGAAATACTCCGGATTCAACAA
GCGATATCTTAAGTTCCATAAAAGCTATTAAGATCGGACAAAAAGTATCG
CGCAGAGCTACTAATCTATTTTCTTATTTTTGAATAACGATAAGAGAGGG
TTCAGCTGTCTCTGTTAGTGCCGATTTGAACCGGGTTGGTTGAAAATCGG
CATTTTGGTACAGTCAAAAAAAAACATGTCCTTAACTCGAACCCTATATG
ACTCGAATGTCTCCTTAACTCGAACAAGTTATATGGTTCCTTCATTTAAT
ATGTAATGCATTATAAAATTTACTCTATAACTCGAACAAATTTGTGTTTT
CTGTGCGTGTTCGATTTATGGAGACTCCACTGAATAATGCATTTTTCCAT
TATTTTCACTTTCACTCACTTTCCAGGATGCTGAGGAATATCTTTCAAAC
TTGGTCACCTCAAAAACCGTATTTGCAAAGATTGACCGCCCGGCCGGCAT
TATCGTATTCCGCCCACCGAAAGACGCTAGTGACACGCTGAACGATTGGT
CACGTGACATCTCAGAGCTGATGGTATTATTGAATAAAACGACTCACTTA
ATCACTAAAGAACAAATGGTTCATCAGCTACTGAACTGA Coding sequence (CDS) from alignment at sc0000145_pilon:608482..616320- >XLOC_043637 ID=XLOC_043637|Name=XLOC_043637|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2754bp|location=Sequence derived from alignment at sc0000145_pilon:608482..616320- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTCTGAAACAATAACAGATATGAAGGGCAATATTGTCAAAATGGA
AGTGGATTACAGTGAAACTTGCGACAAGAAACTTCCTGAACTTGAAGAAA
TGGCTAAGATGGCTTCTGAAACAATAACAGATATGAAGGGCAATATTGTC
AAAATGGAAGTGGATTACAGTGAAACTTGCGACAAGAAACTTCCTGAACT
TGAAGAAATGGCTAAGAGCGGTAAAATTGAAGATGCATTGGAAGCTTTAT
TAGCTCTTGAAAAACAAACAAGAACGAGCGGTAAAATTGAAGATGCATTG
GAAGCTTTATTAGCTCTTGAAAAACAAACAAGAACGGCAGCTGATATGTT
TTCCACAAGTCGTGTTCTAGTTACTGTCATCAAGATTTGTTTTGCCACAA
AGAATATCGAACTACTCAATGAACATCTGTTGTTATTGACAAAACGAAGA
GGACAACTCAAGCAGGCAGCTGATATGTTTTCCACAAGTCGTGTTCTAGT
TACTGTCATCAAGATTTGTTTTGCCACAAAGAATATCGAACTACTCAATG
AACATCTGTTGTTATTGACAAAACGAAGAGGACAACTCAAGCAGGCTGTG
ACAAAAATGGTACAAGAAGCATGCACGTATGTTGATCAAATCGAAAAGAA
AGAGGACCAATTAGAATTTATTGACACACTTCGTACAGTCACGTCCGGAA
AGGCTGTGACAAAAATGGTACAAGAAGCATGCACGTATGTTGATCAAATC
GAAAAGAAAGAGGACCAATTAGAATTTATTGACACACTTCGTACAGTCAC
GTCCGGAAAGATTTATTTGGAGTTGGAGCGTGCAAGGATAACTCGTAAAT
TGGCTCAAATGAAAGAGGCTGACGGAAATATTGCAGATTTATTTGGAGTT
GGAGCGTGCAAGGATAACTCGTAAATTGGCTCAAATGAAAGAGGCTGACG
GAAATATTGCAGATGCGGCAACGGTACTCCAAGAATTACAAGTGGAAACA
TTCGGCTCGATGGAAAGGCGGGAAAAGGTGGAATTTATATTGGAACAAAT
GAGATTGTGTTTAGCCAAAAAAGATTACATCCGTACGCAGATTATCAGCA
AGAAAATCAGTACCAAATTCTTTGACGATAACAAGGAACAGATGCGGCAA
CGGTACTCCAAGAATTACAAGTGGAAACATTCGGCTCGATGGAAAGGCGG
GAAAAGGTGGAATTTATATTGGAACAAATGAGATTGTGTTTAGCCAAAAA
AGATTACATCCGTACGCAGATTATCAGCAAGAAAATCAGTACCAAATTCT
TTGACGATAACAAGGAACAGGACTTGAAATTGAAATATTATCAACTGATG
ATTGAGCTTGGACACAACGACGGAAAATACTTGCCCATTTGTAAACATTA
CAGAGCTGTCTTCGATACACCTTCCATACAAGAAGATGAAACCAAAATGA
AAGAGGACTTGAAATTGAAATATTATCAACTGATGATTGAGCTTGGACAC
AACGACGGAAAATACTTGCCCATTTGTAAACATTACAGAGCTGTCTTCGA
TACACCTTCCATACAAGAAGATGAAACCAAAATGAAAGAGGCTCTTCGCA
ATGTCGTTTTGTTCATCGTTTTATCAGCATACGATAACGAACAATCCGAT
CTTTTATCCAGAATTGCCGACGAACCAAAATTAGAAAATATCATGTCTTT
CAAGCTCTTCGCAATGTCGTTTTGTTCATCGTTTTATCAGCATACGATAA
CGAACAATCCGATCTTTTATCCAGAATTGCCGACGAACCAAAATTAGAAA
ATATCATGTCTTTCAAGCGATTGATCAAAAACTTCACCACGCACGAGCTG
ATACACTGGGTAAGGTTCAAGGAGCTGTACGAAGTAGAGTTGTCTCAAGG
AACTGAGGCTAACCCTGCCACCGGTGTATTTAACCGAACAACAGAACAAG
GACAGAAACGATGGGATGATTTAAAGAAGAGAGTTGTGGAACATGCGATT
GATCAAAAACTTCACCACGCACGAGCTGATACACTGGGTAAGGTTCAAGG
AGCTGTACGAAGTAGAGTTGTCTCAAGGAACTGAGGCTAACCCTGCCACC
GGTGTATTTAACCGAACAACAGAACAAGGACAGAAACGATGGGATGATTT
AAAGAAGAGAGTTGTGGAACATAATTTGAGAGTGATGGCGAAATACTATA
CAAGAATCACCGTCGAACGCATGTCTCAACTTCTCGATCTTTCTAAAGAG
AATTTGAGAGTGATGGCGAAATACTATACAAGAATCACCGTCGAACGCAT
GTCTCAACTTCTCGATCTTTCTAAAGAGGATGCTGAGGAATATCTTTCAA
ACTTGGTCACCTCAAAAACCGTATTTGCAAAGATTGACCGCCCGGCCGGC
ATTATCGTATTCCGCCCACCGAAAGACGCTAGTGACACGCTGAACGATTG
GTCACGTGACATCTCAGAGCTGATGGTATTATTGAATAAAACGACTCACT
TAATCACTAAAGAACAAATGGTTCATCAGCTACTGAACTGAGATGCTGAG
GAATATCTTTCAAACTTGGTCACCTCAAAAACCGTATTTGCAAAGATTGA
CCGCCCGGCCGGCATTATCGTATTCCGCCCACCGAAAGACGCTAGTGACA
CGCTGAACGATTGGTCACGTGACATCTCAGAGCTGATGGTATTATTGAAT
AAAACGACTCACTTAATCACTAAAGAACAAATGGTTCATCAGCTACTGAA
CTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000145_pilon | genome | sc0000145_pilon:608482..616320 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1165-1377:214 |
| Aaloc | 1087-1164:1599 |
| Aaloc | 910-1086:3252 |
| Aaloc | 796-906:3966 |
| Aaloc | 661-795:4798 |
| Aaloc | 484-660:5305 |
| Aaloc | 406-480:6091 |
| Aaloc | 298-405:6470 |
| Aaloc | 169-297:7009 |
| Aaloc | 109-168:7487 |
| Aaloc | 1-108:7840 |
|
