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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000002_pilon:3733967..3738311+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043634 ID=XLOC_043634|Name=XLOC_043634|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4345bp|location=Sequence derived from alignment at sc0000002_pilon:3733967..3738311+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTCAAATAAGCAAGATATACTACAAGGAGAGCGTTGTACTACACT
AGGTGCGTGCGCAGTGGATAACACTAAATGTTCAATATGCCTAGCACAAA
TTGACCGAGGTTCAAAGTCCAATAAATGTTCACACTGTATCAAAAAGATG
AATTCGATACCGACTGGTTTTCAATTCGAAACTGACGGAGAAGAGAAGAA
GGAATTTGAATGCCCGATTTGTTTGGGTAAGTAGAAAGTTGAACATTATT
TAAGAGAATATTCGATATTGTGTACAGTGAATTCATTAACTCATACATAT
ATCTAGTTTAAAGTAGAGATCGAATCGCGGGCTCCCTTTTTGCGATCAGT
TTGCTAACCTTTCCAAAAGGTGTGAGTCACTTCTTTCGTTTGAAAAACTT
AGCTCCTGAATCGTTATTAACAAACGATTTCTCACTGAATAATATCATcc
tgtacacatttttttataagcaacttcaATTTCAGGGTCTGGGCTGGGGT
TGCAAAGCATTCTAtcttattttctgaaaaaatatcGATGCATAGGTTCA
AAGGCTTCTATTTTACGAGAGGCTCaagccttagcaacctggttgcttat
aaaaaatgtgtttgGTATGAAAGTTTGAGTATGCAACTTACTTTAACTTG
TTTTCTTCACTCAAACAAGTACATTAATTAGTCAGATAAGCAAGAGTGAG
GTTGAGCCAATAACCTTACAAACAGAAAGCAACCACTAATCTTGACATCC
AAcgaattttatcattttattcagGTATCATAAGAGATGCAACCGAACTA
CCATGTCACCATTTGATGTGTTTGGCCTGTCTTGAACATTACGAAAacga
agaaaaagagaaagtcAAAGGAAATGGAGAAGACGAGAAGACAGCGGTGT
ATTTATGCAGTATTTGTCAGAAACCATATCAGCCGAAAGATGTAAgacat
caaaaaaagattttttaaatcacaCTTTTaatataagaatggtgtaacaA
AAATTCTAGGGCTCAGTTGCCAAATTCTATGATCGTGGTTTTCTTAAGTA
ACTTTTTGGCTGAGTTTCTAAaggaatattcatgatattcctttagagta
cattcttataagaaaaattgtgtaattcgtgttcttataaaatgcgTGTA
TCATTTGAtcacaatatttcagaaaataacTCGGCAAAAGTCATCAAGTT
ATACTCTATTAATCTTGATCTAGAAATATCAAGTCAAGTCCATTGACAGG
ATTATTCAGACATCGATTCGTGTGAAATGCCATCAGAAACAATGCACCTG
GGTTGGATGTATCATGGACTACCAggtgagaaatttcaaattcgagAAGC
TCAATTCAAGattcaaatttacaattttactGATAActaaaaagaatata
tttttttctccaaatgaACCACCCGACTTGACAATCAAGTCAATTAAACG
CAATTggatttttccagaaaaaaaaccgtgcaccccctgttgaggagtcc
atttccattccaagggggtatggtttgaaatgcagtggaattccagagca
gtagacaaaaatccgtcaaaaataagtggaTTTCCATGGGtgtaatgatt
gaaaatctgtaaaaattcggaattccagaggggaaTGATCCTAaatttgc
ctggaattccaaggggctAGTTCAAAAAAGGTTGgagctcctcaacaggg
ggtgtacggtttttttctggaaaagcccattagtagataggctgctggca
tccactaacggattcgtgctccttatagaggatgcttaataagctatatt
tcctttgtccagagatttgccgcctttagccgatatacggctaaagacat
tgtTAGCTGGTGAGTGTGAGTGAAAATTTtatgtgaggcaccaaatcata
gattggaaaatatatttggatttagaaaaaaaagtaggcggaaggaagtt
tgcttgtttttcttcctcctttcttgttcaatgtggagattttgtaaaag
atgagaagttagatttattgaatttatgtaccctgatgtatcttctgtgt
gcaccaacaaaattttgcttcataaaactacattttgatgcttgaatttg
gacttgtatggagtgtataatttttttaccacactggattcgttgataaC
TTttgctccagataattgttttgtcagttctacagatatgttgcagatta
tttcaaggtattctagttatgtatatacagtacatttttggGGTCATact
gaatatttctgacattagttctttatgattctacaaaagggagtgttgtt
gttccttcaacaaggagctttaaatattaaaacaaacaaagaacttttct
tcagctttggcatttcactttttaatactgtgtgcctttgtatcttttca
ggtacttagcttcaattctttgaagagattggagtgtttctggttgtttt
ctttcacttttgtgttcatatttgtatttttttgagcttcgaccgaagag
ctgatggaaaagttttgataaatttacagaccagatatcgtATAAAAGCA
AACGtcgaaaataaatctacagactgtacataatgcgcccataaaattgt
tttttatcttttttctgttttgttttttctggtctgggattcgaattttg
aatgcaaacattccattgaaaacgtttgaaacgatcgtttttgcgtacac
atcaatgtcaatcaaattattaactcgcAAAGATctcctttgcgaaccgg
aaagcggttggtagatcattaagcagacctatactaccaggggttttgta
gaggtctgcgattcagactaattaGTAGACGGAATTAAAGActgaaattt
cttcccttttaaaagttttcatttttccttcttttacaGCAACATGACAA
GATTTGCAACTGTGTATTGGAACCTTGTCCCTACTTCGAACTTGGATGCG
ACGTCATGGTAAGAAGTTCTTTTTCCAAGTCAAAGATTCGAATTCTAACA
GAGCTTTCAAGACGTTCTCTACAATAAAAACAAGGatctttatacacgtt
ttttttttaaacatccaaaatttttgaagccttcggattttcagttttaa
gcctaaaaatgttctttacatgttcttatttttataattttgtgaCCATT
CTtactttcctaagaaattgcgTGTTTTCGAGtccttaaagccttaaaat
gttcttaacaatttTGCCATCGAgcccttatgttcttattttttagtttg
ttcttataaaaaaaacgtgtactaaacctttttcttaaatttcactggct
gttctaataaaaatgttttagtGAAGAAGAATATCAGAAAATATCCtttt
tttAAGCATTTGGGCCTGTTCCTACAGGAAAAAATAATCTACACTATATT
TGAAATTGCTTGTGCTAACATTCTTCTTTTTAGATCGAGAGAGGGCAGAT
ACAAACACACAGCCGATCCAATAGTATCATCCACGAAACACTGTTACTGA
AAAGCGTCAAAATGTTTTCACAAGAACGAAAACAATATCAACAACAAATC
AAtgatcaaaacaagaaaatcgAGAGTTTAGAAGCGACTGTGACAACACT
Gaaaaaacatgttgaaaaaatcgaaaaagacaccgcgcaaaatattttga
caacaaaaaGTGAGGCAGCAAAGGCTCAGAAAATGCGAGAAAACATTGTA
AACATTGAAAAGGATTTCGACCAGCGAAAAGCCGAAGTACAGAATTTGAA
AGTTCACGCAGAGCAACTAAGTGAATTACATTTAACATTAAGCCTGCCAg
atataagaaatcaaaggtcTGTCAGTAAATTTCTACACAAGAAGGATTAC
GACACCATGAAAGAAGTTAAGAGCTGGAACGCCTTCGTGAAAATAgcaaa
tcgaaacaaaaattgTAGCTATTTGAACACTTTAAAGGATGCAATTAACA
ATTATAGCGAGACAGTATTTAGCAAAAAATGGCACACCAGACTTTCACAA
AAAACCCGTTCCCAAACAGAAGGTTGTATGGTATACGGATATCTCAAATT
AAGAACGTACATCCAAATTGAAAAGATCAGCGTaaaaaaaTGCAATGATC
GAAAAGAATTTCAGGAGGCAACTCGAGATGAGAAATGGTGCAGACATTCA
GCCTTCACGGCAAGCTTTGTAGACTTTCCTAATGAAGCTTTACACGTAAT
GATACAGTTTGATTTCAAAACAGTTTCTCTTTTCCATTgggaagatgaag
aaaaaaacagaacaaTTCCATTAAACGGAGTACCCGTAATCTTGGGTGAT
AGAAAATTTAGTCTCCATGCAGGAGTCTTGCTCCGTTTTAATTGA Coding sequence (CDS) from alignment at sc0000002_pilon:3733967..3738311+ >XLOC_043634 ID=XLOC_043634|Name=XLOC_043634|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2952bp|location=Sequence derived from alignment at sc0000002_pilon:3733967..3738311+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTCAAATAAGCAAGATATACTACAAGGAGAGCGTTGTACTACACT
AGGTGCGTGCGCAGTGGATAACACTAAATGTTCAATATGCCTAGCACAAA
TTGACCGAGGTTCAAAGTCCAATAAATGTTCACACTGTATCAAAAAGATG
AATTCGATACCGACTGGTTTTCAATTCGAAACTGACGGAGAAGAGAAGAA
GGAATTTGAATGCCCGATTTGTTTGGATGAGTTCAAATAAGCAAGATATA
CTACAAGGAGAGCGTTGTACTACACTAGGTGCGTGCGCAGTGGATAACAC
TAAATGTTCAATATGCCTAGCACAAATTGACCGAGGTTCAAAGTCCAATA
AATGTTCACACTGTATCAAAAAGATGAATTCGATACCGACTGGTTTTCAA
TTCGAAACTGACGGAGAAGAGAAGAAGGAATTTGAATGCCCGATTTGTTT
GGGTATCATAAGAGATGCAACCGAACTACCATGTCACCATTTGATGTGTT
TGGCCTGTCTTGAACATTACGAAAacgaagaaaaagagaaagtcAAAGGA
AATGGAGAAGACGAGAAGACAGCGGTGTATTTATGCAGTATTTGTCAGAA
ACCATATCAGCCGAAAGATGTATCATAAGAGATGCAACCGAACTACCATG
TCACCATTTGATGTGTTTGGCCTGTCTTGAACATTACGAAAacgaagaaa
aagagaaagtcAAAGGAAATGGAGAAGACGAGAAGACAGCGGTGTATTTA
TGCAGTATTTGTCAGAAACCATATCAGCCGAAAGATAAATATCAAGTCAA
GTCCATTGACAGGATTATTCAGACATCGATTCGTGTGAAATGCCATCAGA
AACAATGCACCTGGGTTGGATGTATCATGGACTACCAgAAATATCAAGTC
AAGTCCATTGACAGGATTATTCAGACATCGATTCGTGTGAAATGCCATCA
GAAACAATGCACCTGGGTTGGATGTATCATGGACTACCAgCAACATGACA
AGATTTGCAACTGTGTATTGGAACCTTGTCCCTACTTCGAACTTGGATGC
GACGTCATGCAACATGACAAGATTTGCAACTGTGTATTGGAACCTTGTCC
CTACTTCGAACTTGGATGCGACGTCATGATCGAGAGAGGGCAGATACAAA
CACACAGCCGATCCAATAGTATCATCCACGAAACACTGTTACTGAAAAGC
GTCAAAATGTTTTCACAAGAACGAAAACAATATCAACAACAAATCAAtga
tcaaaacaagaaaatcgAGAGTTTAGAAGCGACTGTGACAACACTGaaaa
aacatgttgaaaaaatcgaaaaagacaccgcgcaaaatattttgacaaca
aaaaGTGAGGCAGCAAAGGCTCAGAAAATGCGAGAAAACATTGTAAACAT
TGAAAAGGATTTCGACCAGCGAAAAGCCGAAGTACAGAATTTGAAAGTTC
ACGCAGAGCAACTAAGTGAATTACATTTAACATTAAGCCTGCCAgatata
agaaatcaaaggtcTGTCAGTAAATTTCTACACAAGAAGGATTACGACAC
CATGAAAGAAGTTAAGAGCTGGAACGCCTTCGTGAAAATAgcaaatcgaa
acaaaaattgTAGCTATTTGAACACTTTAAAGGATGCAATTAACAATTAT
AGCGAGACAGTATTTAGCAAAAAATGGCACACCAGACTTTCACAAAAAAC
CCGTTCCCAAACAGAAGGTTGTATGGTATACGGATATCTCAAATTAAGAA
CGTACATCCAAATTGAAAAGATCAGCGTaaaaaaaTGCAATGATCGAAAA
GAATTTCAGGAGGCAACTCGAGATGAGAAATGGTGCAGACATTCAGCCTT
CACGGCAAGCTTTGTAGACTTTCCTAATGAAGCTTTACACGTAATGATAC
AGTTTGATTTCAAAACAGTTTCTCTTTTCCATTgggaagatgaagaaaaa
aacagaacaaTTCCATTAAACGGAGTACCCGTAATCTTGGGTGATAGAAA
ATTTAGTCTCCATGCAGGAGTCTTGCTCCGTTTTAATTGAATCGAGAGAG
GGCAGATACAAACACACAGCCGATCCAATAGTATCATCCACGAAACACTG
TTACTGAAAAGCGTCAAAATGTTTTCACAAGAACGAAAACAATATCAACA
ACAAATCAAtgatcaaaacaagaaaatcgAGAGTTTAGAAGCGACTGTGA
CAACACTGaaaaaacatgttgaaaaaatcgaaaaagacaccgcgcaaaat
attttgacaacaaaaaGTGAGGCAGCAAAGGCTCAGAAAATGCGAGAAAA
CATTGTAAACATTGAAAAGGATTTCGACCAGCGAAAAGCCGAAGTACAGA
ATTTGAAAGTTCACGCAGAGCAACTAAGTGAATTACATTTAACATTAAGC
CTGCCAgatataagaaatcaaaggtcTGTCAGTAAATTTCTACACAAGAA
GGATTACGACACCATGAAAGAAGTTAAGAGCTGGAACGCCTTCGTGAAAA
TAgcaaatcgaaacaaaaattgTAGCTATTTGAACACTTTAAAGGATGCA
ATTAACAATTATAGCGAGACAGTATTTAGCAAAAAATGGCACACCAGACT
TTCACAAAAAACCCGTTCCCAAACAGAAGGTTGTATGGTATACGGATATC
TCAAATTAAGAACGTACATCCAAATTGAAAAGATCAGCGTaaaaaaaTGC
AATGATCGAAAAGAATTTCAGGAGGCAACTCGAGATGAGAAATGGTGCAG
ACATTCAGCCTTCACGGCAAGCTTTGTAGACTTTCCTAATGAAGCTTTAC
ACGTAATGATACAGTTTGATTTCAAAACAGTTTCTCTTTTCCATTgggaa
gatgaagaaaaaaacagaacaaTTCCATTAAACGGAGTACCCGTAATCTT
GGGTGATAGAAAATTTAGTCTCCATGCAGGAGTCTTGCTCCGTTTTAATT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002_pilon | genome | sc0000002_pilon:3733967..3738311 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 565-1476:3434 |
| Aaloc | 496-564:2890 |
| Aaloc | 394-495:1224 |
| Aaloc | 229-393:777 |
| Aaloc | 1-225:1 |
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