XLOC_043627 (mRNA) -

Overview
NameXLOC_043627
Unique NameXLOC_043627
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000332_pilon:65406..66227+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043627 ID=XLOC_043627|Name=XLOC_043627|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=822bp|location=Sequence derived from alignment at sc0000332_pilon:65406..66227+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGAGCAGGTTGGTTTTGCACTTGGCCAACTTCTCCTACGAAAAACGTAA cgatttttatttctttggcTTGTAATATTATTAACTTAAAAAGGGATCCt cacttactcttaggtgccaaataaacgggggggggggttcgaataaatgg gggggttggaaaaatttatcaaattaaataaacggggggggcctaattac cggggggttggaaaatggacctttaaaaaccctaaaaagggtcaaaataa actaaatttaggctttttagagtaaaacaaggaattttcctttttgtagc tgggaattttttcaaaaattaataaacgggggggtccttataaggtccgg gggggggttggaaaaaaatcgaaaaatcaacaagcgggggggcccgtttt ttattttaagagtAATTGAGTTTTTAATGGACTTGCTCTAGTGCTAATTT TAGGGTtcccttttcattttcaaaccttttaaaattttaggtaACAATCC AAAAGGCACTGGCAATACTCCACCACTAACGATGCACGTATCTGATTCTG ATGATGAAGTTTGGCTTCATCGCTGTCGCTTCATCAAGAACTTCCTGGAA AGGGCCAGAAGAAAAAGTAGTAGCTCTCGACTATGCACCAGAAGGTTCTC CTCAGATAATCTCGAATTTTTATCTTCTAATGTAGATGCAACCGCAACAT CTCTAATTGAAAGACATCATAGACgaacattttcagaaaattcatcATCA CAACCGAGGAAAGCTTCTACCTTAGCTTCTTACTTAGAACAAGAACTGAA CCAAATGAAGAAGTTACATTAA

Coding sequence (CDS) from alignment at sc0000332_pilon:65406..66227+

>XLOC_043627 ID=XLOC_043627|Name=XLOC_043627|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=756bp|location=Sequence derived from alignment at sc0000332_pilon:65406..66227+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGAGCAGGTTGGTTTTGCACTTGGCCAACTTCTCCTACGAAAAACTTGA
GCAGGTTGGTTTTGCACTTGGCCAACTTCTCCTACGAAAAACgtaACAAT
CCAAAAGGCACTGGCAATACTCCACCACTAACGATGCACGTATCTGATTC
TGATGATGAAGTTTGGCTTCATCGCTGTCGCTTCATCAAGAACTTCCTGG
AAAGGGCCAGAAGAAAAAGTAGTAGCTCTCGACTATGCACCAGAAGGTTC
TCCTCAGATAATCTCGAATTTTTATCTTCTAATGTAGATGCAACCGCAAC
ATCTCTAATTGAAAGACATCATAGACgaacattttcagaaaattcatcAT
CACAACCGAGGAAAGCTTCTACCTTAGCTTCTTACTTAGAACAAGAACTG
AACCAAATGAAGAAGTTACATTAAgtaACAATCCAAAAGGCACTGGCAAT
ACTCCACCACTAACGATGCACGTATCTGATTCTGATGATGAAGTTTGGCT
TCATCGCTGTCGCTTCATCAAGAACTTCCTGGAAAGGGCCAGAAGAAAAA
GTAGTAGCTCTCGACTATGCACCAGAAGGTTCTCCTCAGATAATCTCGAA
TTTTTATCTTCTAATGTAGATGCAACCGCAACATCTCTAATTGAAAGACA
TCATAGACgaacattttcagaaaattcatcATCACAACCGAGGAAAGCTT
CTACCTTAGCTTCTTACTTAGAACAAGAACTGAACCAAATGAAGAAGTTA
CATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043627XLOC_043627-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000332_pilongenomesc0000332_pilon:65406..66227 +
Properties
Property NameValue
Aaloc49-378:493
Aaloc1-45:1