XLOC_043618 (mRNA) -

Overview


Name	XLOC_043618
Unique Name	XLOC_043618
Type	mRNA
Organism	Clytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence

The following sequences are available for this feature:

mRNA from alignment at sc0000010_pilon:793488..795914-
coding sequence from alignment at sc0000010_pilon:793488..795914-

mRNA from alignment at sc0000010_pilon:793488..795914-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_043618 ID=XLOC_043618|Name=XLOC_043618|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2427bp|location=Sequence derived from alignment at sc0000010_pilon:793488..795914- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTACGGAAGCAACAAAGATATTAATCAAGCCGCTGAATGGCGCTAA
CTACGCCACTTGGAAAGTACAATGTAGAATGGCGTTGATTCGTGAGGGGT
TGTGGAATATCGTCAACGAGACGGAAGGAGTTCCAGAACAAAATGTGGAC
AAGTATCGATTGCGGAAGGATCGCGCACTGGCGACGATCGTGCTATCAAT
GGAACCTTCGTTATTGTACCTACTGGGGCCGGATCCAGATGACCCGGCAG
AGGTATGGAAGAAACTCTCAGATCAATTTCAAAAGAAGTCGTGGGCAAAC
AAATTGGCTCTACGAAGAAAGCTCTACACTTTACAGCTGAAGGACGGACA
ATCAATTCAAAAGCATATTAAAACTATAACTGAACTGTTTGATGAGTTGG
CTATCGTTGGGGATCCGCTGGATGATGAAAACAAAGTTGTCCATTTACTT
GCAAGCCTTCCCAAATCTTACGACATGTTGGTCACCGCACTGGAGGCGAA
TCCTGAAGTTCCGAAGATTGAAGTCGTCACCGAGCGTTTAATCCACGAGG
AGACGAAACAGAAAGAAGGAATTCAGCAAGACGAGAAAGCGATGTCATCG
AGACACAGTAACAGACGAGGATCGGGAAAAGGACCACAATGTCATTTTTG
TGGAAAACATGGACACTTTAAACGGGACTGCTACAGTTACAAAAAGTCCT
TAAAAAGTGACGAACCCAAGAACGATGATTTTAAACCAAAGAAGAAACCG
ATTATCAAACAGCGAGCTTGTCCAGCAGAGGAGCAATCGGACGATGAGGA
AATTGTTGGATTGTATGTAGAGCAAACGAAATCAGAAATAGCTACTGATT
GGATCATAGACTCAGGAGCTTCGTGTCACATGAGCTATGATGAGAGGCTA
TTCAATGAAATCAAAGAGCTTGATGAGCCTCAGGAAATAACTGTAGGAGA
TGGATTCAAGGTTAAAGCAGCTGGTGTTGGGACACTTGATCTATACATGA
AGTTACCAAATGGAAAGACAAATCACTGTAGATTGTCAGACGTCCTGTAC
GTACCGAAGTTATCATATAATCTTTTCAGCGTCTCGAGAACAACGAAAAG
AGGGAAGAGAATCGAGTTCGAAGATTCGATTTGTAAGGTGCTTGACAAGG
ACCGGAAGTTAATCGCTATTGGAATGAAGCGAGGAAATATTTATCATTTG
AACTGTGTTCAACAGTCTAAAGGGACTAATGAAGCCGTACTTTGTAAAGC
AGAGGACACAAATGAAGCCGTATGGCATCGACGCTATGGTCACCTTGGAG
TAAAAAATTTGGACCGGTTAGCGAAGGATCACCTGGTCGAGGGATTCGAT
TACGATGTCAAGAAGGAGGAAAAGTTTTGTGAACCATGCGTTAGTGGGAA
GCAGCACCGCACACCATTTCCGAAAACAGGAGGAGCACGGACGGAAGTTT
TGCTTGGAGAAATACATTCTGACGTATGCGGAAAGATCGAGGAGAAGTCA
CTGAGCGGTGCAGAATACTTTGTGACCTTCATTGACGATAAAACACGAAA
CACATGGATGTACACAATGAAACATAAAAGTGAAACTTTTCAAAAGTTTA
AAGAATGGAAAGCGATGGTCGAAAAGACAACTGGTTTGAAGATTAAGAGA
CTTCGAACAGACAATGGAGGTGAGTACACCTCAAACGAATTTGAGGAATA
CCTTAAAGCTGAGGGAATTCAACACAAAACCACGATTGCTAAAACACCGG
AGCAGAATGGTGTAGCGGAAAGGATGAATCGGACACTAGTAGAAACTGTG
AGAGCTATGTTGGCTGACTCGAAATTGCCAAAACGTTTTTGGGCTGAAGC
TTTATCGACAGCAGTGTACCTACGAAACCGAAGTCCAACGAGAGCAGTCC
AAGACATGACTCCGTATGAAGCTTGGACAGGAGCTAAACCGAATGTGAGC
AACCTCCGAATCTTTGGTTGCAACGCTTATGCACACGTACCAAAAGATGA
ACGTGCAAAGATTGATCCAAAAACGAAACGCTGTATCTTTCTGGGTTATG
GTGAGACGACGAAAGGTTATCGGTTATACGATGAGAAGAAACAAAGAGTA
TTCTTTAGCAGAGATGTCGTTTTCAACGAGACAGAGGAACCAAACCAAAA
TAAGTCATCACCGGAGAAAGAGGAAGCAGCAACCGAACCAGCCGTGGATA
TTAATCCGCACAACGAAATCCTAGACGGCGAAAATGATGATCCAAGACCA
CGAGATCCACCAAGAGCTAGAAGAGAGATCAATCCTCCAAATCGTTATGG
AGATTGGGTAGTCCACATCGCGAAACAGGATGACGATCCAAAGTCGATAA
GAGAAGCTCTTTCTAGTGAGGAAAAAGAAAAATGGACAGTGGCTATGGAG
AAAGAGTTTAATTCACTCCACGAGAAT

Coding sequence (CDS) from alignment at sc0000010_pilon:793488..795914-

>XLOC_043618 ID=XLOC_043618|Name=XLOC_043618|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4854bp|location=Sequence derived from alignment at sc0000010_pilon:793488..795914- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTACGGAAGCAACAAAGATATTAATCAAGCCGCTGAATGGCGCTAA
CTACGCCACTTGGAAAGTACAATGTAGAATGGCGTTGATTCGTGAGGGGT
TGTGGAATATCGTCAACGAGACGGAAGGAGTTCCAGAACAAAATGTGGAC
AAGTATCGATTGCGGAAGGATCGCGCACTGGCGACGATCGTGCTATCAAT
GGAACCTTCGTTATTGTACCTACTGGGGCCGGATCCAGATGACCCGGCAG
AGGTATGGAAGAAACTCTCAGATCAATTTCAAAAGAAGTCGTGGGCAAAC
AAATTGGCTCTACGAAGAAAGCTCTACACTTTACAGCTGAAGGACGGACA
ATCAATTCAAAAGCATATTAAAACTATAACTGAACTGTTTGATGAGTTGG
CTATCGTTGGGGATCCGCTGGATGATGAAAACAAAGTTGTCCATTTACTT
GCAAGCCTTCCCAAATCTTACGACATGTTGGTCACCGCACTGGAGGCGAA
TCCTGAAGTTCCGAAGATTGAAGTCGTCACCGAGCGTTTAATCCACGAGG
AGACGAAACAGAAAGAAGGAATTCAGCAAGACGAGAAAGCGATGTCATCG
AGACACAGTAACAGACGAGGATCGGGAAAAGGACCACAATGTCATTTTTG
TGGAAAACATGGACACTTTAAACGGGACTGCTACAGTTACAAAAAGTCCT
TAAAAAGTGACGAACCCAAGAACGATGATTTTAAACCAAAGAAGAAACCG
ATTATCAAACAGCGAGCTTGTCCAGCAGAGGAGCAATCGGACGATGAGGA
AATTGTTGGATTGTATGTAGAGCAAACGAAATCAGAAATAGCTACTGATT
GGATCATAGACTCAGGAGCTTCGTGTCACATGAGCTATGATGAGAGGCTA
TTCAATGAAATCAAAGAGCTTGATGAGCCTCAGGAAATAACTGTAGGAGA
TGGATTCAAGGTTAAAGCAGCTGGTGTTGGGACACTTGATCTATACATGA
AGTTACCAAATGGAAAGACAAATCACTGTAGATTGTCAGACGTCCTGTAC
GTACCGAAGTTATCATATAATCTTTTCAGCGTCTCGAGAACAACGAAAAG
AGGGAAGAGAATCGAGTTCGAAGATTCGATTTGTAAGGTGCTTGACAAGG
ACCGGAAGTTAATCGCTATTGGAATGAAGCGAGGAAATATTTATCATTTG
AACTGTGTTCAACAGTCTAAAGGGACTAATGAAGCCGTACTTTGTAAAGC
AGAGGACACAAATGAAGCCGTATGGCATCGACGCTATGGTCACCTTGGAG
TAAAAAATTTGGACCGGTTAGCGAAGGATCACCTGGTCGAGGGATTCGAT
TACGATGTCAAGAAGGAGGAAAAGTTTTGTGAACCATGCGTTAGTGGGAA
GCAGCACCGCACACCATTTCCGAAAACAGGAGGAGCACGGACGGAAGTTT
TGCTTGGAGAAATACATTCTGACGTATGCGGAAAGATCGAGGAGAAGTCA
CTGAGCGGTGCAGAATACTTTGTGACCTTCATTGACGATAAAACACGAAA
CACATGGATGTACACAATGAAACATAAAAGTGAAACTTTTCAAAAGTTTA
AAGAATGGAAAGCGATGGTCGAAAAGACAACTGGTTTGAAGATTAAGAGA
CTTCGAACAGACAATGGAGGTGAGTACACCTCAAACGAATTTGAGGAATA
CCTTAAAGCTGAGGGAATTCAACACAAAACCACGATTGCTAAAACACCGG
AGCAGAATGGTGTAGCGGAAAGGATGAATCGGACACTAGTAGAAACTGTG
AGAGCTATGTTGGCTGACTCGAAATTGCCAAAACGTTTTTGGGCTGAAGC
TTTATCGACAGCAGTGTACCTACGAAACCGAAGTCCAACGAGAGCAGTCC
AAGACATGACTCCGTATGAAGCTTGGACAGGAGCTAAACCGAATGTGAGC
AACCTCCGAATCTTTGGTTGCAACGCTTATGCACACGTACCAAAAGATGA
ACGTGCAAAGATTGATCCAAAAACGAAACGCTGTATCTTTCTGGGTTATG
GTGAGACGACGAAAGGTTATCGGTTATACGATGAGAAGAAACAAAGAGTA
TTCTTTAGCAGAGATGTCGTTTTCAACGAGACAGAGGAACCAAACCAAAA
TAAGTCATCACCGGAGAAAGAGGAAGCAGCAACCGAACCAGCCGTGGATA
TTAATCCGCACAACGAAATCCTAGACGGCGAAAATGATGATCCAAGACCA
CGAGATCCACCAAGAGCTAGAAGAGAGATCAATCCTCCAAATCGTTATGG
AGATTGGGTAGTCCACATCGCGAAACAGGATGACGATCCAAAGTCGATAA
GAGAAGCTCTTTCTAGTGAGGAAAAAGAAAAATGGACAGTGGCTATGGAG
AAAGAGTTTAATTCACTCCACGAGAATATGGCTACGGAAGCAACAAAGAT
ATTAATCAAGCCGCTGAATGGCGCTAACTACGCCACTTGGAAAGTACAAT
GTAGAATGGCGTTGATTCGTGAGGGGTTGTGGAATATCGTCAACGAGACG
GAAGGAGTTCCAGAACAAAATGTGGACAAGTATCGATTGCGGAAGGATCG
CGCACTGGCGACGATCGTGCTATCAATGGAACCTTCGTTATTGTACCTAC
TGGGGCCGGATCCAGATGACCCGGCAGAGGTATGGAAGAAACTCTCAGAT
CAATTTCAAAAGAAGTCGTGGGCAAACAAATTGGCTCTACGAAGAAAGCT
CTACACTTTACAGCTGAAGGACGGACAATCAATTCAAAAGCATATTAAAA
CTATAACTGAACTGTTTGATGAGTTGGCTATCGTTGGGGATCCGCTGGAT
GATGAAAACAAAGTTGTCCATTTACTTGCAAGCCTTCCCAAATCTTACGA
CATGTTGGTCACCGCACTGGAGGCGAATCCTGAAGTTCCGAAGATTGAAG
TCGTCACCGAGCGTTTAATCCACGAGGAGACGAAACAGAAAGAAGGAATT
CAGCAAGACGAGAAAGCGATGTCATCGAGACACAGTAACAGACGAGGATC
GGGAAAAGGACCACAATGTCATTTTTGTGGAAAACATGGACACTTTAAAC
GGGACTGCTACAGTTACAAAAAGTCCTTAAAAAGTGACGAACCCAAGAAC
GATGATTTTAAACCAAAGAAGAAACCGATTATCAAACAGCGAGCTTGTCC
AGCAGAGGAGCAATCGGACGATGAGGAAATTGTTGGATTGTATGTAGAGC
AAACGAAATCAGAAATAGCTACTGATTGGATCATAGACTCAGGAGCTTCG
TGTCACATGAGCTATGATGAGAGGCTATTCAATGAAATCAAAGAGCTTGA
TGAGCCTCAGGAAATAACTGTAGGAGATGGATTCAAGGTTAAAGCAGCTG
GTGTTGGGACACTTGATCTATACATGAAGTTACCAAATGGAAAGACAAAT
CACTGTAGATTGTCAGACGTCCTGTACGTACCGAAGTTATCATATAATCT
TTTCAGCGTCTCGAGAACAACGAAAAGAGGGAAGAGAATCGAGTTCGAAG
ATTCGATTTGTAAGGTGCTTGACAAGGACCGGAAGTTAATCGCTATTGGA
ATGAAGCGAGGAAATATTTATCATTTGAACTGTGTTCAACAGTCTAAAGG
GACTAATGAAGCCGTACTTTGTAAAGCAGAGGACACAAATGAAGCCGTAT
GGCATCGACGCTATGGTCACCTTGGAGTAAAAAATTTGGACCGGTTAGCG
AAGGATCACCTGGTCGAGGGATTCGATTACGATGTCAAGAAGGAGGAAAA
GTTTTGTGAACCATGCGTTAGTGGGAAGCAGCACCGCACACCATTTCCGA
AAACAGGAGGAGCACGGACGGAAGTTTTGCTTGGAGAAATACATTCTGAC
GTATGCGGAAAGATCGAGGAGAAGTCACTGAGCGGTGCAGAATACTTTGT
GACCTTCATTGACGATAAAACACGAAACACATGGATGTACACAATGAAAC
ATAAAAGTGAAACTTTTCAAAAGTTTAAAGAATGGAAAGCGATGGTCGAA
AAGACAACTGGTTTGAAGATTAAGAGACTTCGAACAGACAATGGAGGTGA
GTACACCTCAAACGAATTTGAGGAATACCTTAAAGCTGAGGGAATTCAAC
ACAAAACCACGATTGCTAAAACACCGGAGCAGAATGGTGTAGCGGAAAGG
ATGAATCGGACACTAGTAGAAACTGTGAGAGCTATGTTGGCTGACTCGAA
ATTGCCAAAACGTTTTTGGGCTGAAGCTTTATCGACAGCAGTGTACCTAC
GAAACCGAAGTCCAACGAGAGCAGTCCAAGACATGACTCCGTATGAAGCT
TGGACAGGAGCTAAACCGAATGTGAGCAACCTCCGAATCTTTGGTTGCAA
CGCTTATGCACACGTACCAAAAGATGAACGTGCAAAGATTGATCCAAAAA
CGAAACGCTGTATCTTTCTGGGTTATGGTGAGACGACGAAAGGTTATCGG
TTATACGATGAGAAGAAACAAAGAGTATTCTTTAGCAGAGATGTCGTTTT
CAACGAGACAGAGGAACCAAACCAAAATAAGTCATCACCGGAGAAAGAGG
AAGCAGCAACCGAACCAGCCGTGGATATTAATCCGCACAACGAAATCCTA
GACGGCGAAAATGATGATCCAAGACCACGAGATCCACCAAGAGCTAGAAG
AGAGATCAATCCTCCAAATCGTTATGGAGATTGGGTAGTCCACATCGCGA
AACAGGATGACGATCCAAAGTCGATAAGAGAAGCTCTTTCTAGTGAGGAA
AAAGAAAAATGGACAGTGGCTATGGAGAAAGAGTTTAATTCACTCCACGA
GAAT

Gene-mRNA-Prot

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
XLOC_043618	XLOC_043618-protein	Clytia hemisphaerica_ch_hm2_pilon	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000010_pilon	genome	sc0000010_pilon:793488..795914 -

Properties


Property Name	Value
Aaloc	1-2427:2428

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XLOC_043618 (mRNA) -