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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000072_pilon:558021..560505+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043603 ID=XLOC_043603|Name=XLOC_043603|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2485bp|location=Sequence derived from alignment at sc0000072_pilon:558021..560505+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagacTTGGTGTTTGTTTGCGATCACTTTGGTTATGACTTTCATAGA
GAGTAATGCTATCTTCCTGACGCACAATGTTCCTGATGTTTATGCAAGAG
CTAAGAAAGCAGAAAGGGTAAGATTTTTGTTCAGCACTAATTCTATTTTA
TTCAACTGACtccctaattcgatcttcaCCAAGTGTtcttttcgaattat
agaaagattcggattACGGAGAGTTATCTTTTAGACGGCTTTCCTGTTGA
GGGAatcaatgttttagttcgaattaccaaagttcgaattatagagagtt
tgTTATATACACTATCAACCCTAGACTGGTAACGAAAATACGAAAATTCT
TCTCGATGAAGGTATCGAAAACACAAGTGAAGGAGTTGTTGAAATATTGT
AAATGCATTACCAGTCCCTTCAAAAAACCGACCACGACGTAAATGGTTGA
TAGGCGTATTTAACACTTTTCTTATTGATGAATTAAGATTTTACCTGCAA
TCTCGTCCCAGAGCAACTCCAACTCCTCCTGTGATTTTACTAGATGCGGT
AGAACCTTTCATAAGAGCTATAAGAATCATAAAAAACGAACTAAGGGATT
GGGTACAAGTTTGCGTTATTCATAACAACCAAGTGTCGTAGACCCCTTAC
CCTTTCTCAATTCGAAATCAACCAAAATTGTTCCAAATTCCTTTGAAAAA
CTGCACTGCAGTTCTACCATACTGGCAAGAacaaataccttattacacga
atattactaggcaagtattcaacggccttaaaattaacacgcaaaaaatt
aacacgcaaaaaattaacacgaatcttatttgctttttcaaggacactaT
ACGGCTGGCTTTAACTGAGGGTTTTTATCAACACGAAGTTTTTTAATTCG
TGTTTATAAAATGAGTAGTAATactcgtgtaataaggtataatTACACTG
TATATCTCCACCCACCACCCGTCATTGcccccccTTTGGCACTTTGCTCC
TTCattccatccccactgaggaaacaCACCGGGTCATTGAGACAGAGGTG
TAATTTGCACCTTCATTATACGTAAGGAGCTTTGCTTTCCAGTTAACAGA
GtaaatatcaaaacattgtTAAAGTTACAGCCCTGTGTCACTAACCTGGT
GGGGCCCCAGCCCACtataaatttgatcaaaatttattcccggtgtttgg
aaaaataccctaatttccaccccactggaaaattgacttggATTTCTTGC
CAATTCGATATCCGATGTAAAAAATTGCAGACCGAAATCATCGCACTGGA
TTTTTTGAGCTAGGATTTTATCCCCTTTGTGAGATAGAATTCCACcgagc
tgtgagacaggggtgtaatttaTTTAATTCATCTTCGTTGAAGTAACATT
TTGGCTCTAACCATTCTCTAGCGCAAAGGAGGATGGGATTGCAAGTCGTA
CAAACAAATACATTTGTATTGTACAGATTTGTCAGTATTTTTAGATTCCC
CATGGTGTGCTATTTGAATTCATACTACAATATAATATCGTTTTTATAAT
ATCAGTCTCGATTGACCACATTTATAATCGAATAGAACAGCGTCTTTTAG
AATGAACTCTTTTTGGAAATGTTAATGTCTATAAAATAttagaatgaaaa
attaatacATTTTAGTGACTTTTAAATTCACATCTTAAAACTTTTATcat
attaaaatgaaaaattaagataCATTTTAATGACATTTAAATTCACATCT
TAAAACTTTTATcatattaaaatgaaaaataaatatattttagtgacttt
taaattcaaatcttAAAACTTTTAGCTAAAGTTCACCTGCTGTAAAATCC
GCCTCTAGGCAGGTGCTTTGTCTAGCCAATCCAAAAAATAACCTTTGAAC
TTATGAGGAGAAACAAGAAACAGataaagtatttaaaaaaaacgttaata
taaaatttgaatacaAGTCTACTCTTTTATTTCAGAATTttaaccgcaaa
atttaaccgcaaatttcttttttcgcaTGTAAAGAAATTAAGTTTAGTTG
AAAGAATGCAAATTtaattttcgaatctttctaaaatTTGGACTTGTTTC
CAATACCAATCATAAAGAAACCattgtaaaatactttctacAATTTGAAT
CTCTCTATAATTTGATCAGATAAGATTCCCCTTTCCTAGTCCGAATTAGC
AAGAGCCAACTGTATGGCCTACGATTCCAACTaaatgttcttttcttctt
cattttccagTCGGACATAATCATCCTATGCAGCAAAAATCCTTCACTAT
GCAATCGTTTGAGGTCAATGGGTATGAAACACCACAAACGAAGCACAATG
GACAAATCAAACGATTTTTTACAAAACGATTTTGACTTTGAAGAATACCA
TGAGGAGAACAACAGACGAACGAATGATGACAAAGCATCAAAACGAACAA
TCAAGAAGTACTACCTAGTTGAAGAAGGCAAATAA Coding sequence (CDS) from alignment at sc0000072_pilon:558021..560505+ >XLOC_043603 ID=XLOC_043603|Name=XLOC_043603|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=684bp|location=Sequence derived from alignment at sc0000072_pilon:558021..560505+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagacTTGGTGTTTGTTTGCGATCACTTTGGTTATGACTTTCATAGA
GAGTAATGCTATCTTCCTGACGCACAATGTTCCTGATGTTTATGCAAGAG
CTAAGAAAGCAGAAAGGatgaagacTTGGTGTTTGTTTGCGATCACTTTG
GTTATGACTTTCATAGAGAGTAATGCTATCTTCCTGACGCACAATGTTCC
TGATGTTTATGCAAGAGCTAAGAAAGCAGAAAGGTCGGACATAATCATCC
TATGCAGCAAAAATCCTTCACTATGCAATCGTTTGAGGTCAATGGGTATG
AAACACCACAAACGAAGCACAATGGACAAATCAAACGATTTTTTACAAAA
CGATTTTGACTTTGAAGAATACCATGAGGAGAACAACAGACGAACGAATG
ATGACAAAGCATCAAAACGAACAATCAAGAAGTACTACCTAGTTGAAGAA
GGCAAATAATCGGACATAATCATCCTATGCAGCAAAAATCCTTCACTATG
CAATCGTTTGAGGTCAATGGGTATGAAACACCACAAACGAAGCACAATGG
ACAAATCAAACGATTTTTTACAAAACGATTTTGACTTTGAAGAATACCAT
GAGGAGAACAACAGACGAACGAATGATGACAAAGCATCAAAACGAACAAT
CAAGAAGTACTACCTAGTTGAAGAAGGCAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000072_pilon | genome | sc0000072_pilon:558021..560505 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 118-342:2261 |
| Aaloc | 1-117:1 |
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