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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000188_pilon:28680..36301+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043597 ID=XLOC_043597|Name=XLOC_043597|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7622bp|location=Sequence derived from alignment at sc0000188_pilon:28680..36301+ (Clytia hemisphaerica_ch_hm2_pilon) TTGACGTTGAGTTCTCTTGAAGACAAGATGTCAAGTTTGGTATTCTTATT
TATTCTTGTGGTTTTTACTTTAGATTTGTTGGAGGGTTCGCCTCCTAAAC
ATGGTTACCAATATAAAGTGAAATCTTTAGGTTagttgaaacttcaaaaa
actttctttaactCGGATGAAAAATCATAAAGGTACATATTATGCCTGGA
ATCTCGCTagtacaccttttcgaccgttgtcgcgcggtcaggcgcgtgcc
acttaattatatAATCACCCCCCTTAAACTcgacccaatccttttttgac
acatttttctcttgtctataggtgcgaacaAAGAACttggacggttttag
tgggataaagcggacacaaaaacgcccgcgcggcaattggcggctacggt
caaaaaggtgttttcgaacttctattattaaAACTAATTCTCAGTCCCGA
CCTCGAATTAGTGGGAGTTAACTGTAtaagataccttatcggggaaaact
ttgtcggggaaaagtgacgaaattttgaacaacgaaattttggacaagtg
acgaaaattttccccggccttaatgcgtttaccaactacccaccaagtga
cgaatttttccccgacgaaaatttttactgacgaaaattttccccgatga
agttttccccgataaggtaataatAATGCATCCAAAAACACATTAAAACA
TATAATTTGTTAGGAAATTAGATCAAAATTATAAACGTGTAAACAGTGAC
AGATCTGAGAGGAAACACTCCCTCTGGTATATAAAGTACTTGATTTAGCT
AACTTTCGATGGCGATAGTAAACTTCTGTTGTCACGTTACCCTTCCTTAT
CTTTGCTTGTCTTTGGAGCCTGTGAACACAATAACCATTCATTATACCTT
GTGCGCcacaaaaaatttctctctttgaaactgattttttcgaaatctaa
gaATTAACAAACAGCAATTCCTATTCcatcagaaagaagaaagataaact
taaattttgatgggtcatttattaaattcgattcattggatcaaaagtta
tgctcaattgaataaaaaagttactttcagaaagtgcccgaaaacgttaa
aaatcgacctatcaaatttttattttaaaattggcaatcgcaagaggctt
tacatgattaagaacattttttcagtaattaaacacataaatgtCGAAAC
TGATGgaacgaaagggtttaaaatgttcattaaaatcatttcaatttact
tttaaagaaattttccacagatttttggttctagactggataaagtctat
gtaaggcatttttttataaattttaccagattttttggcttttttcgacg
aaacttctgccttttattgaaattcaatcttcctttatatGACAAACGGT
Caattagacagctaattatcatttttaatgactgaaacgaaaatactgat
gcatcatgttattatgcttctgtttaatttgaaaggtcgatttttaacgt
ttttgagcactttcagaaagtaacctttttattcaatagagcataacttt
cgatctaatgaaccgaatttaataaattacCCATCAAAAGTTAAGTTTAT
ATATCTTCTTTCCAAttgaataggaatggttctttAAAATTTTTAGATTT
CGGGAAAATTAGTTTTAAAGAGAGAAACCTTTTTGTGGCGCACCCGGTAG
AACTAAAAAATAATGCCCAGAATGAGCAATTTGGGGAAAGATTCATAAAA
TTGACTTGAGGTTGCGTGCTAGTACCTTATCGGCCAAAACTTAGTCGGCC
CTAAAAGTGACTAAATTTTGGCTTGGTGACTAAAATCAGGGCCGACTAAA
AATTATTGGGCCAAATTAAAAGATTATAATTTACTTATTTTCCAGTATTT
TAAGTTTTCTTCTATTTTCCATCTACTTGTCAATTTAAAAATGGCCCAAA
TTTTTAGTCGGTCTTAATTATTAGTCGGCCCTTAGTGACTAAATTTGACG
AGGTGACTAAAATTAGGGCCGACTAATAATTAAGGCCGACTAAGGTTTGG
CCGATAAGGTAGGGTTGAAGTGCCGAAAACCAAAAGAGAAAGGTTGAAGT
CTTTTTCCGGGCGGAGCATGTGACTTTATACCTTTTACATTATTCTTCCA
GATCAATGCATCAGTCATGACTTTTCACCTATTGGATGTATGAAACAAAG
TGATCATGATCGAAAGAAATCGGACTTGGTAAGGAATTGATTGGATTGAT
TGATCTTTAGTCTCTTCATGAAAtacacccttgtctcacagccccggtgg
aagtttttcctcagtggggataaaaattcctatgtgaatggttttggagt
gcaattttcgagcAATCAATTTCCTAGTAGGACCGAAATTCCAGGGTTTT
TTCCCATTGGGCACGAAATCCTTGCTAAATTTTCCGGTGGGGCTGGGGTC
GCAGCGGGTCTGTGAAACATGTAGCTCTTTGTTTATCCAGCGTTTATCGT
TTATTTATCGTAATTATATCATGTTTCTGTGAAAACCAAACGAATAAAGC
GTAttgatgatatgcaccattgtaatgtcttccacggatccAACAACTGA
Tttggttgaaagtgatgtattgactgattttacgtcacttacaaccaatc
atcTGTGAGGTTTATTGTGTTATATGTCGAATATAATAGAGATGAAAACA
GTGTAACTGggttaatgaaaataaaatgtgaagTTGGTACTTATAGGTGC
TTTGTATATGAGTGGACAAAGACTGACATAACAGAAAAAGAATacatctc
ttcttttttttagatCCTTACAGGGCGTGACCCACACAGTCCTTCATACA
ATGACAAAGAACACGCCCATGTTAATGATGGGTTATGGACTGATTACGAT
GAATGGTTACCAAATTTTATTTGTCAGTaagtatacacgctttttttata
agaatatactttataagaatgtccatgataaaaatagccaaaagattaag
aatattccaagaatatcaccattatggaatttggcaactgaagaTTAGAA
TGTAATTTTTAGAGCGTTTTCAGTTATAAATTACTAATTATCCCCAAGTT
AGTCTCACTCCTTTTATAAAAGTGCCagtttatgcttgagacgtatgttt
caaatgttaaatctagtttgaattagggtcttaacctaagaatgctgtaa
gtatagtttaggatgattttcccccaAAAGTTAAGAATCATGAAATGAag
aaacaccattcttataaaaaaagcttgtgtTCGTTTCTTTATAGGGAACA
CGCTTATAAgaaacttgaggctgaaaatgattcAAAAGATAAGGAACTga
tcaggctgagaataagaaaacaagttaaggAACAGAGAGTTGAGCTTGAA
CATGCACACTATTGCCTAGgcctaaacaaaaagatgacaaaatattGACG
AAACAACATTCAATAAACGTCTTCTCCTGTACTGTAGTCCATTGTCATAC
CTATATATAAGTTACATACTTAGTAAATCCCATATTAGCAGCGAAGTAAA
TAAGGAACTTGATAAGgaaatttgaggctgaaattctctgcaAAAATAAG
AAACTCAAGGCTAGGAGctaagttaaggttccttacaaaaaaagcgtgta
ttttatGACGTAAGTATCACGAGAGGTTTTCCAGTGTAAAATTTGCAGAC
TCTATTACATTCTACTGAAAATACagtagtctccataactcgaccaCGCG
CGGAGaacaaagattttttcgaattatGGAAGAATTATGGAGTTATggag
taataaaaaaaaactcttgaaGTTGAATaatcttttgaaattgataaact
cgttttcttttgtttagatGTGCAAACGAGCTTTACCAGAAATATCCGAA
CAGTCAATCTCATATCATTGGCATAGGTTACTATGGTAAGTCCAAATCCC
GCTTCATTAGACCACACCCAAAGGTTAGTGGAAATTTTTTACCCCCtccc
ctgattttcaaaaaattaacctGGTAACCACCGCCTGTATGTAGATAAAA
TGGAATGAACCATTAGATTCTGAACGttaatctttttatttcatttagcG
GAATGCTGGTCGATTTCAAAACAGAATTTTGAACGTCTCCTTAAAGAGAA
AGGAGTAAAAGCATTTTCTCATCAATGTGTCAAAAccgattttaagaaat
ttttcccTCTTCGACCGAAAATAGAAAAGTGTGGAAGTTTTAGTGGTAAA
GATGACACCATGTTTGTTTACAAGGTTGCCAAGCAACAAGGTGAGCGCTt
ttgtctgatttttttttctgaattttcataCCGTCATATCCTTAATTTAA
TGTGACCTCTAATGAATGcagataaattattttgacaaaTTATGCTTAAA
TCAACTAGAGTaaaaaaaTTCCAGTTTCCGTAAAACCGTAGGGACCGTAA
GGACCctatttccgaaattccgtcgATATTTACGTCAAAccccccccTCT
CCGTtcgaaaaaagggtcgattccACTCCTCCACCAACAGTGAACAGCGC
TgtgttgaaaaattttattttcattatatcATTTTGTTACTTCAGATTCT
TGCAAACAATTTTATGTTCAAAAAGGATGCAAGAAAATCGAGAACGATAC
CACTGGCAAATCCCCCAAACCAAAAGGTTTACAAAAAGTGATTGTTCTTG
ATAAGAATGATAAGAAATTGTTTTGTACATGTTCCAAAGAAGCCATTAAA
TCAGGACATCGGTATTTCTCTGTCAATCGCCAAGGTAAGCTTTTTGTTGA
CATCCCTTCTAGGTTGTCTGTATACAGACCCAGtcagtcggaaccactac
atagaaatggcaactattgccttaacgggaaatatttcccgaacgggaag
gtgaaagtaacccaaaaaggaaactgtttccagattgaaaatttcatcac
ttttctgtttcccgttttggtcaagGGCTTTTCAttgttcccgaacggga
agttgaattttgtaaacaaagcagatttttgtttcccgatcgagaagaag
tttccaaatagggaagtttttaattgggaatggGGAAATTAGAATTAAGA
ACGATTACCCGGTGAAAGGTATTTatttaccctcttttacaatagGCATC
ATTTATTTACCTTCCACGACCATTTCCGGAGTGCGCAGAAGTCacattcc
cgatcgggaaactggtTAACTTCCTGATTCGGAAACTCTAtccatttcgg
gaagtttttcaccttcccgttcgggaaatatttcccgttaaggcaatagt
tgccatttctatgtaATGGTTCCGACTGCAAGTATCTacgactaatttca
aaattcattgcgataaacgtgagatacactctggtacagagtactcACTA
GGCTGctcggcagattttttttccttctgaAACCTGAtgcagacctgatt
tagcgaccgaagacctgaattaacgcTGCGCAAATCCCCTCTCCGATATG
TTTTTGATATAAGGGGATGctaatcgtgtataaaattttcgtccgagagt
taccccaaaATTAgggtaacctgtttcaattttcttaaaaacgtttagaa
atccaatgattgtattaGCCTGctctagccattcaaatttttaattcaaa
tttaaagatCTATCAAGTAactaatcaagctaatcaattttctaaaacta
aaaacaaaGACGGGGGTCCCTCCCGGACAAGAATTTTATTCATGTCgcac
atcccctatatcaaaacatatcagtgGGGATGCGTGCAACCTACCTTCTC
ACAGACTGGTTGGGATCCCCGTCCAATGAAAGAAAtggctaaaaataaaa
atatcgtTTTCAGTAGAAAACTATACTCCAAATATtgtcccgctgaaaat
aattaatttaaCAAACCCTTACTTCAAAATATTGTGCATTTTTTCCATCt
ccaatgaattttctgacttgaaaacaatggaattcaaatcacAAGCCATA
AAGAAAAATCGTCGGAATATCTATCTTCTTCGAGTTTCAGTCCGCTATTT
TTACCGCCCGACTGGCTAAAAAATCCTGCGGGGTCTATGCGAAGGGATTG
TTTTTATGACCTTTTGTTCTTTGATTTCTTCTCTTATctaagactttttt
tctttctcaccCCTCTCACTGATTATTTAAAATGACTGCTCTACTGGGGG
AAGTAGATTTCTCTTCTAGCCTGGGAGATGCGGTCATaggtaaatatttt
caaaacatgcatatctcaaaatattttccagtacagttgacgctctctaa
tccgATCTTCAAGGGGAATTACCGATTTTCATCGAACAAGgaagcttatc
gaataagggagcatcgtttatgagagtttcttaagGGAGCCtattgaata
gtagaacgtcaaattagagagcgtcaactgtatttatttTTCACCTCTGC
AATGTGTTTTTTCTTTCTCAGGTAAATGCTTTCTATGGGATAGTTCAGTC
ATGGAATTGGAGCCTTCGGAGAAATGTTACGATAGTGCGTCaaaacaatg
cccaaaatatcGATCCAGTTGTAAATCTTCGCCACATTGCAGTGGCCTCA
CATCCTTGGACCATCAGATCTATGAAGCAGTACAAGGTATTGcatttttc
ctttgtttgattttgcgATTATTATCTACCCCTCCCGTATCTCAGAACCC
ATTTCAATCTCCTGTCAACTGGATAAAATTCAGCTACAGTGCAAGGTACC
CATGCCACAGATTTGTGCAAAGCCCGAATGACTAGATAGAGTGCTTTAAG
TTTTTCCAAGTAAAAAagaagtgaatatcgcaaaaagaATTGTTgccatt
attttcgaaaatccacCAATTTTGGATTTAACGCAGGTTAAATCGTGGTT
TAACtttatttgataagcgctaCATATAATTTTAATCCCTGGGTGACCGC
CCtccgccaactgagtctactATATCATGTTCATAATGGCCGCTGTAACT
GAAAGCTGAGaggataaaataatttttacctccctccctgcctgcagtta
tggttgtaggcgatcctcGCTTATTTATGCTACTATTGTATTTAACGgaa
caaattttccccaaacttattattcgaggattagccataaatTTACGCCA
AAGCTATATCTACCGACTCACACTTATTTCTCAGCCGTCTGACTAATTGA
TTGTTTTCTAACCCTGATCTAagtcataggcaaatggaaagttgaATTTC
TGATttgtcaagcgctgaaattctattttaatgTCACGTGATTAGGTAGG
ATTATTTACCCAATACATTCatgaataaatttattttacCATTACAGGTC
CATTTGCATGTGaaaaaaaTCCATGTAAGAACAAAGGAGTATGCTCATCC
AATCGACTTTTCTCTTTTAAATGTAAATGCCCGAAAGGTATTTCTGGTGA
TCGTTGCCAGATAGGTATAAATTGTTTTTACACGACTcacactatttata
agcatacagaAGCTTACATTTGCAAAAAGAATAAGCACAATGCTAAGTAT
AGCTCGAAGCTTGGAACGTTcatcattttgactttttcactTGCCCAAAC
CATAATAAGTGCTTCTTTTTGA Coding sequence (CDS) from alignment at sc0000188_pilon:28680..36301+ >XLOC_043597 ID=XLOC_043597|Name=XLOC_043597|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2418bp|location=Sequence derived from alignment at sc0000188_pilon:28680..36301+ (Clytia hemisphaerica_ch_hm2_pilon) TTGACGTTGAGTTCTCTTGAAGACAAGATGTCAAGTTTGGTATTCTTATT TATTCTTGTGGTTTTTACTTTAGATTTGTTGGAGGGTTCGCCTCCTAAAC ATGGTTACCAATATAAAGTGAAATCTTTAGTTGACGTTGAGTTCTCTTGA AGACAAGATGTCAAGTTTGGTATTCTTATTTATTCTTGTGGTTTTTACTT TAGATTTGTTGGAGGGTTCGCCTCCTAAACATGGTTACCAATATAAAGTG AAATCTTTAGATCAATGCATCAGTCATGACTTTTCACCTATTGGATGTAT GAAACAAAGTGATCATGATCGAAAGAAATCGGACTTGATCAATGCATCAG TCATGACTTTTCACCTATTGGATGTATGAAACAAAGTGATCATGATCGAA AGAAATCGGACTTGatCCTTACAGGGCGTGACCCACACAGTCCTTCATAC AATGACAAAGAACACGCCCATGTTAATGATGGGTTATGGACTGATTACGA TGAATGGTTACCAAATTTTATTTGTCAatCCTTACAGGGCGTGACCCACA CAGTCCTTCATACAATGACAAAGAACACGCCCATGTTAATGATGGGTTAT GGACTGATTACGATGAATGGTTACCAAATTTTATTTGTCAatGTGCAAAC GAGCTTTACCAGAAATATCCGAACAGTCAATCTCATATCATTGGCATAGG TTACTATGatGTGCAAACGAGCTTTACCAGAAATATCCGAACAGTCAATC TCATATCATTGGCATAGGTTACTATGcGGAATGCTGGTCGATTTCAAAAC AGAATTTTGAACGTCTCCTTAAAGAGAAAGGAGTAAAAGCATTTTCTCAT CAATGTGTCAAAAccgattttaagaaatttttcccTCTTCGACCGAAAAT AGAAAAGTGTGGAAGTTTTAGTGGTAAAGATGACACCATGTTTGTTTACA AGGTTGCCAAGCAACAAGcGGAATGCTGGTCGATTTCAAAACAGAATTTT GAACGTCTCCTTAAAGAGAAAGGAGTAAAAGCATTTTCTCATCAATGTGT CAAAAccgattttaagaaatttttcccTCTTCGACCGAAAATAGAAAAGT GTGGAAGTTTTAGTGGTAAAGATGACACCATGTTTGTTTACAAGGTTGCC AAGCAACAAGATTCTTGCAAACAATTTTATGTTCAAAAAGGATGCAAGAA AATCGAGAACGATACCACTGGCAAATCCCCCAAACCAAAAGGTTTACAAA AAGTGATTGTTCTTGATAAGAATGATAAGAAATTGTTTTGTACATGTTCC AAAGAAGCCATTAAATCAGGACATCGGTATTTCTCTGTCAATCGCCAAGA TTCTTGCAAACAATTTTATGTTCAAAAAGGATGCAAGAAAATCGAGAACG ATACCACTGGCAAATCCCCCAAACCAAAAGGTTTACAAAAAGTGATTGTT CTTGATAAGAATGATAAGAAATTGTTTTGTACATGTTCCAAAGAAGCCAT TAAATCAGGACATCGGTATTTCTCTGTCAATCGCCAAGGTAAATGCTTTC TATGGGATAGTTCAGTCATGGAATTGGAGCCTTCGGAGAAATGTTACGAT AGTGCGTCaaaacaatgcccaaaatatcGATCCAGTTGTAAATCTTCGCC ACATTGCAGTGGCCTCACATCCTTGGACCATCAGATCTATGAAGCAGTAC AAGGTAAATGCTTTCTATGGGATAGTTCAGTCATGGAATTGGAGCCTTCG GAGAAATGTTACGATAGTGCGTCaaaacaatgcccaaaatatcGATCCAG TTGTAAATCTTCGCCACATTGCAGTGGCCTCACATCCTTGGACCATCAGA TCTATGAAGCAGTACAAGGTCCATTTGCATGTGaaaaaaaTCCATGTAAG AACAAAGGAGTATGCTCATCCAATCGACTTTTCTCTTTTAAATGTAAATG CCCGAAAGGTATTTCTGGTGATCGTTGCCAGATAGGTATAAATTGTTTTT ACACGACTcacactatttataagcatacagaAGCTTACATTTGCAAAAAG AATAAGCACAATGCTAAGTATAGCTCGAAGCTTGGAACGTTcatcatttt gactttttcactTGCCCAAACCATAATAAGTGCTTCTTTTTGAGTCCATT TGCATGTGaaaaaaaTCCATGTAAGAACAAAGGAGTATGCTCATCCAATC GACTTTTCTCTTTTAAATGTAAATGCCCGAAAGGTATTTCTGGTGATCGT TGCCAGATAGGTATAAATTGTTTTTACACGACTcacactatttataagca tacagaAGCTTACATTTGCAAAAAGAATAAGCACAATGCTAAGTATAGCT CGAAGCTTGGAACGTTcatcattttgactttttcactTGCCCAAACCATA ATAAGTGCTTCTTTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000188_pilon | genome | sc0000188_pilon:28680..36301 + |
Properties
| Property Name | Value |
| Aaloc | 937-1209:7350 |
| Aaloc | 772-933:6474 |
| Aaloc | 583-768:4598 |
| Aaloc | 391-579:4101 |
| Aaloc | 322-387:3869 |
| Aaloc | 208-318:2814 |
| Aaloc | 133-207:2154 |
| Aaloc | 1-129:1 |
|