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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000010_pilon:747717..754607- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043590 ID=XLOC_043590|Name=XLOC_043590|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6891bp|location=Sequence derived from alignment at sc0000010_pilon:747717..754607- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGGGCGTTGAGCTTAACCACCAAGAACAACTTCAGATGATTAAATT
ATGGGAAAAGAAACGCCGAACAACTTTTAGAGCATTCTGTTTATTTTCTC
TTGTTTTGGGGTTAGAATACGGTCTATCTATCCCAACTCTCCTCAACTAT
ATCAAAGACAAAGTGAAAGCACCAAATCCTCAAATGTGGTTTGGGATCAT
AGCATCAACTTATCCTTTGGCTTCTATGATCGGCTGTTTAACCATCACCA
AATATGCAGACCACACTAAAAACATTCGACTCATCTTATTGGCAACTAGT
CTATTTGCATCATGCGGGAACATAATATATGCCACACCCAAACATCAATT
AATTGTCATGTTAGGACGTGCTTTACAAGGATTCGCAGATTCATTGATTT
CGGTTTTATTCGGTGAGATTATAAGGAATTATTCTCGAGAAGAGCAATTA
CAAAAGCTATCAACGTTCATGGTGTTCTATTATACGGCATACATTGGAAG
CCCCTTGGTTATAACAATATGCAGTGGTGTAGATTTTCATGTTTTTGGGA
TGGATGTTACAGTTTATAATTTTCCATTCTTGCTAGTGAGTGGGATATGG
GTTTTGATATTTTTGACAACTTTCTTCTTCGTTACCGACTTGTCCAAGGA
GTCTGAAGTTCACCAACTTTTATGGAAAAACAAAAAGACTTTGGAGAATA
ACAGCCTTAGTGATACAGGAAAAGTATTAGATAATACAGAACTGAGAAAC
AATGAAAACCCTTTATTCCTGGTCGATCTACTGAAAATAACCGAATTCAA
TTATAGCCTACTTGTCAGTTACCTGTGTGGATATTTTTCAATGGTTTTCA
ATGCCATCTATATACCAATCATATCGAATAGTATATATCACATTCAAGTC
AGATTCGTTGGACTTCTTTACACCCTAAACGCCTGCGTCTTTGGTATTAC
AATGCTCATAAGTAACCGATTCGATCATGGTGGTAGTGAAATTTATTTTA
TCATTCTTGGACTATGTTCAATTTTAATCGCCCTACAAGCTATTTCTTTA
TCAGTGGTGAGTTATCAATTTAAGATTTTTGGAATATCAATGTTGGTTTT
ATTCTCAATATCAACAGGAGCCGGATGGTCTGTTGATCAAGTTTTCTTAG
CGGCTTTACTCGGTAAAATTATACCATTAAATACTCAAAGTTTTGCAGCT
GGTGTCCGCAAGACTATGGTCAATATCTCGTATGTTGTTGGGGGATTATT
CGCACCGCTGGTACAATCGTATATTTCTGAACACGCTATTATTCTTTCAG
TATGTATATTTTCAGTCATTATCATTTTGTTGTGTAAAAGAAAACAATTC
TAACCTCCTGGAAATCCATTTTCTTTTCTTTCAATCTTTTACCAAGCCTA
GCCCGCACTAGTTTTTCTAATTTATTAATATGCTTATTTGCTTCAAAATA
GGTTTAAAACTTAAGCATTTTTCTTTGATGAAGTCTGAGGATGATGTTCA
AAGGTTTGAGCTGAATTTCAGCTTAATGTCCTTTTTAGAATTATTCTGAT
TTTGTATTTTGTGGGTTGGTTTTGATTACTTTGAAGGATGATCATAAGAA
AGGGTTCGTTGTCTGTAAAGAATTCTTATATGTCGTTAAAACTGACTGAC
GAACGCTTGAAAGAGCAGGAAACTTCGAAACTTTAAGTAGGAAAAAAACA
GAAGTTTCTCCGTTCATTTCTGAACTATAATTCTTTTATCCAATATGTCG
TCCCACAATCATCACCAAGAAAAATAATCATCGCATTTCCTGCTTCAAAT
GAAAAAGTTGTGTTGTGTAGATATACACTTTCTTTTATAGGAACATTCAA
AAATTTTTGAAACCTTCGGATGTCCTTAACTTTTTGGGTTTTAAGCCTTA
AAATATTCTTAATTTCAACATTTTGTGACCATTTTTACCCATTTACCTAA
GAAATCGGGTGTTTTCAAGTCTGCAAAGCCTTAAAATATTCTTAACTTGC
TCTTAACATTTTGACAATTAAAGCCTAATATAGTTCTTATATAATTTGTT
CTTATACAAAAAAAGTGTAGAACATCGTACAACGAAGGCATAAAATAAAG
CAAACCATTTTAAAAATCTTTTTCTGCATAGTGACACACCTTTCTTTACA
TCTCAAAAACCATCTATTACGAATATAGGAGATATTAAAACAATAGCCTA
CGGGCTTCGTATCTTGATGTAATAGACGATATCGGATTTAGATAAATGCA
ATGCATTCTGGTTTCTAGGGACTCTCAAAGGAATTATAATAGATCAATTA
TAATAGATTATAATTCCTTTGAGAGTCCCTAGAAACCAGAATGCATTGCA
TTTATCTAAATCCGATATCGTCTATTTTGGGTTACTTCATCTCAAACTTT
CTTCATTTCTAAGGGGTTTCTAAGGAAAAGTTTTCGTATTTTCAATTTTT
GTAAAGCGATGACTATCTTGTTTTGAAAGTAATTGGAACATGTTGTATTT
CAATTAACAATAGCAATTTAATTAATCTGTTCTAATTGCACACGTTAATT
GTGGTGGTCTAATGTATGGGAACATAATTATCAAAAAGGTTTAAGTTATG
CAAGTTTGCGGTTCCAAAATAGTTTTTTCTAGAATCTGCATTCCTTGAGT
ATAGGCAAAAATGTCACGAGAACAGTTTCAAATTCTTTTTTTATTCTTTC
TTTACTGCATTAGCCTGAGTTCAAAGTAGGGTTTTCCGGATTTGTGTATT
TGAGACGGACAAACCTCGTTACAGAAACCCGTCTGTGCCGGAAAATTCAC
GATTTTTAAAAAGAATTTTGATTTATAGTGAAAAAATTGTAAGAAAGTCT
CTCTAAGGGTAGGAAATTTTTCACAAATCGAAGAAAATCTTTCAAAAAAG
TCTCTCTAAGGGTCACCTTTTCAGCAAAAATCTGTCTTTTTAAGAGTCGG
TTTTTGGAGATCCCATCCGCACCCATACCCCTCATCTACCAACCCTAGAC
CCCCCCCCTGGGCTGCTCTCATACCTCATTAAAATGACCCTCAAAATGGG
GATGTGAATTTCTCCTTTGAAACTATGGAAATAGAACAAAATATATTTAA
CTGAAAAAATAGGAATGGGCTGACTCCCTCTTTCCAAAGAGAGGAAAATT
CCTGATCCTAGAGTTGCCATCTCCCTAGAAAGCGTACGTGTTTTACAACG
TACCTGTAAAACGGTTAAGCATTTACTTGCAATTAACGTTCCACCAAATG
TATCGAGTAACGTTTTACTGTGTTGTTGAATATGGAACGGTTTATATCTC
TCGTTCACTTCATCTGCAGTTAGAATCTCGTGTGGTACTTTCAACTCTTC
GCATATTCGCTGAGCATTTTGTAATTCTTCTTGTTCAAGATGTTCGTCAA
ATACTTGTATACAACCGTTGTTACTGAAATTTTGAATAGGAAAGAATTCT
TAAGTAGAGTGGACTCTCGATAATTTGAAATCGAACAGGAAATCTTATTT
GTTCGAATCACAGAGAGATTTGAATTATAAAAAGTATATCAAGAGGGTTT
TTTCACATTGGGGGACTGGATATAAGTTCGAATTATGGAAAGATTTGACA
AATAGAAGTTCGAATAAGCGAGAGTCTACTCTATGTAAGTGTAATATATG
ACTCCTAAAGCCCCGGAGGTTTCAGCAACCCCAGTTTTGAAAAAGATAAT
CGACAATGAAGAATAATCTTCGTCAATTTACAAGCGTCAATGTTATTTTC
GAAAAATCAGAATAATGGAGATCGGGGGATTAAATCCGATCCAAACTCCA
GAATTCCAAATTTCTCCAGCCACCAGAATACACTTATAAACGATATGTAA
TGTTACAAATGGAACTGGGCTCTAACTTATTAATGAAAATTTTTATTATT
TGTGAGTACGTCCAGATTTGTATTAATTTGACGTCTTTAAGGGTTAAATT
GAGGCTACTCCCTTTTCAAAGGCAATGGTTTACGGTTGTCGTGAAAATTG
TTCTTTGGGACTTGAAAGAACTTACATGTATAAACGCTCTCCAGTTTGTT
GTTCAAGATCTCTCCATATTGGAAATGAATCGAAAGTCATTTGCGAATAA
ATCTTTTTGGCGTACAGACATCTTGTGATTCTTGTATGACCATGTGAGCT
TCCTCGGGTGTGAGGTAGTGGAAACTAAACATGAAAATAACAAGATTTAA
AGTTGTAGAAGATTTTTTAAAACCTTCATCCATGATAAGCACCAAGCAAT
GCAATTTCGGGACGAAATGGAGTTTTTACAAGCTCTTATTTGATTTGGTT
GGTCGTTAACCAGTAATAAAACAATTTTGTTACTTTTTCTAAAGAACGCG
TCATTTTTATTACTTCAAATGACCAATTATTAAAATATCTTAAAAAATTT
CCATCTCATCTGATGATTTCACGAAATTACTTTACTGCTCTATCTACCCA
ATGACTAGTCTGAATCGCAGACCTCTACAAAACCCCAAGTAGTATAGGAG
CCCATAGGGTATAAGGAGCACGAATCCGTTGGTGGATGCCAGCAACCTAC
CCAATGACATTACTAGGGTTTTTAGTAAGTGTGCCATGTGCTCAATAATT
CAAACATTTATCGTGAATAGTTACACAAGAGTGATACTCTCTAAAATGAA
AAAGTGGATTTATGTCTACCATTTCGAAAAGAAGAACATTTTTGTGCTGT
TTTTTTCTGAGCACACAATTCATTGTAAAGATATTTTAAAGTGGATTTAA
AAAAGTCTGTTAAAAAAATCTTTTTTGTGTTGATTGTCTGTACTGAGCTC
ATAATTCATTGTGAAGATATTTTAAAGTGGATTTAAAAAAAGCCTGTTCT
ACAATAGACACATTTTTATGCTGTTTTTTTTTCTGAGCTTATAATTCATT
GTAAAGATATTTAATAATGGATTTTTAAAAGTCTGTTAAAAACACTTTTT
TGTGTTGATTATCTGTACTGAGCTCATAATTCATTGTAAAGATATTTTAA
AGTGGATTTTTAAAAGCCTGTTAAAAAAAAACTTTTTTGTGTTAATTATC
TGTACTGAGCTCATAATTCATTGTAAAGATATTTAGAGTGAATTTCTAAA
AGCCTGTTCTACAAGAGACACATTTTTTTTTCGTGTTGGCTATTTCTGAG
CTCGAAATTATTTGCAAAATTTTAGTAGGACATTTTTGTGTTTTTAAATT
CTAAGCTCATAATGAGTCGTTACAAAGATATTTTAGAATGGAACTATACA
AACCTGTTCTAAGAGAAGAACATTTTTTTGTTGTTTATTTCTGAGCTCAT
AAGCTGTTGCGCTGCCATTTATTCCTGCCCCAATAACAATGACGTCATAC
ATATTTTCGTGAAAACAGTATCGTATGTTCCACAACACTCGAAGGTCAGT
AAACACCAATAGCTAACTTAATAAGAGCTGCCAGAGAATTTTTTACACGA
CTGCAAATTCTACTTTTATTAAACTTGCAGAATAGACATTGATTCACTGA
ACATAAAAATGAATCCTGTTTGTTCAGGAAACAGAGAATTCTTTTTTTAC
AAGGCTCGTGTTACAAACTAAACTGACATGTAGCTAGAAACAAATGTTGT
CTGAATCAAAGACTTCCATAAAACTGCCGCAGTTAGTACATTCGAGCTTC
CGTTCGGGCTCTGCTTCACACAAACCAAAAAATATTTCCCAGCAAGAAAA
GTACACTAAAATTCACATTTCCACTCACCATTGGTCCTGTGGGGCAGAAT
TAACAAAAGTATTTGTTCTTTGTGCTCGCGGGAGCGGGGGCAGGGGCGGT
AGATAGCTTTTGTTAAAATATAGTGTGTAAGCAAATTGTAGAAAATAAAT
TCGTTAAATGATTTCAAAAACTACAATGGAATGGTTTTGTAAACGAAAGT
TCTTTTCATGACGTAGTTCTAAATATGGAGTTTTCATAAAATATCATTCT
TACTCTGCATCATTGTTGAAAGTAAAAAATCATCAATCTCACGTCCAAAC
AACATCCAAACAACATCCAAATAAAGTCCAAACAATCCATCCTTATGTCC
ACGACATTTAGAACGACTGGGATATTTCCAGATTGATTGGTTCTTCAGTG
CTGCCCATTGAAATCCACCACTTTTCTTGACAACAACTTCTACCATTATT
GCCAGGACAGTGCAATTCCATTTCTTATATTTTTGATTTTTTACAATTTT
CTATTATGAAATATGAAAGGATGTTATGAAACTTGGTGTTATACAAGCAT
CTGACAAACCATTTAATACAAACAAATGCTTGAACCAAACTTTTACCGTG
ATTAATTCAAAAGAATTTTCACCCCCCTAAGAAGATCAGAAAGATTCTAC
AAATGCAACGACTAGACGCGAAGCAAAGAAGAAGTTTGAGAACAAATTAC
AGTTGAAGTGTATTCTTCCTAGGAATAATTTTATTCGACTTAGAGAAGGA
GTGAGGCTTTCTATTTTCATCGAATTACAGAAACATTCAAATAATCAGGG
TTCAAATTACATAGAGTTTAGTTTGTTATCAAGTTTCATTACATTTACAT
TCAATATACATTCAAGGTATATACCTTCTTAATTTTGATGATGGGAAAAA
ATGATATAAATTTGTAACAAAAGAAAATTCAAGAAATTTAAGAAAAATCC
CAATATGAGAAGAACTCGATAGAGGTCAGTCAGAAACTCAAGAATGATCG
AAGCTAAACAAAAGCGACATAAGATTAAACTTTACGAGATTTTAAATGGC
TGGTTCTGTCTTCCAATGAGCATATGAAGATGAAAATATTCTACAGCCAA
AGTGTATTACATAATACAAAACCATTTATTGTATCAACCCTTGTCTCTTC
ATAGTCCTGTATTTATCTTTGAGCGCAACGTTCGTTCTTGA Coding sequence (CDS) from alignment at sc0000010_pilon:747717..754607- >XLOC_043590 ID=XLOC_043590|Name=XLOC_043590|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1002bp|location=Sequence derived from alignment at sc0000010_pilon:747717..754607- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGGGCGTTGAGCTTAACCACCAAGAACAACTTCAGATGATTAAATT
ATGGGAAAAGAAACGCCGAACAACTTTTAGAGCATTCTGTTTATTTTCTC
TTGTTTTGGGGTTAGAATACGGTCTATCTATCCCAACTCTCCTCAACTAT
ATCAAAGACAAAGTGAAAGCACCAAATCCTCAAATGTGGTTTGGGATCAT
AGCATCAACTTATCCTTTGGCTTCTATGATCGGCTGTTTAACCATCACCA
AATATGCAGACCACACTAAAAACATTCGACTCATCTTATTGGCAACTAGT
CTATTTGCATCATGCGGGAACATAATATATGCCACACCCAAACATCAATT
AATTGTCATGTTAGGACGTGCTTTACAAGGATTCGCAGATTCATTGATTT
CGGTTTTATTCGGTGAGATTATAAGATGCAGGGCGTTGAGCTTAACCACC
AAGAACAACTTCAGATGATTAAATTATGGGAAAAGAAACGCCGAACAACT
TTTAGAGCATTCTGTTTATTTTCTCTTGTTTTGGGGTTAGAATACGGTCT
ATCTATCCCAACTCTCCTCAACTATATCAAAGACAAAGTGAAAGCACCAA
ATCCTCAAATGTGGTTTGGGATCATAGCATCAACTTATCCTTTGGCTTCT
ATGATCGGCTGTTTAACCATCACCAAATATGCAGACCACACTAAAAACAT
TCGACTCATCTTATTGGCAACTAGTCTATTTGCATCATGCGGGAACATAA
TATATGCCACACCCAAACATCAATTAATTGTCATGTTAGGACGTGCTTTA
CAAGGATTCGCAGATTCATTGATTTCGGTTTTATTCGGTGAGATTATAAG
ACAAAACCATTTATTGTATCAACCCTTGTCTCTTCATAGTCCTGTATTTA
TCTTTGAGCGCAACGTTCGTTCTTGAACAAAACCATTTATTGTATCAACC
CTTGTCTCTTCATAGTCCTGTATTTATCTTTGAGCGCAACGTTCGTTCTT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000010_pilon | genome | sc0000010_pilon:747717..754607 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 427-501:76 |
| Aaloc | 1-423:6892 |
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