XLOC_043580 (mRNA) -

Overview
NameXLOC_043580
Unique NameXLOC_043580
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000335_pilon:159593..160390-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043580 ID=XLOC_043580|Name=XLOC_043580|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=798bp|location=Sequence derived from alignment at sc0000335_pilon:159593..160390- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAACAGATTCCTGTGGAGAGACGATCCAAAGTCTCACAAACCTCCT
GATCACTCACTATAAATTACTCGTACACATTTTTGGGCTGACGGATTCTC
CCTGTGCTGCGACCTATGCCCTACAACGAGCTGCAAGAGATCAAGCTAAC
AACTATCCACCCGAAGTCATCAAAGCTGTCTTGATAAATTTCTATGTCGA
TGACTTACTCATGTCATATTCAAATGCTACATCTACCAAGGAGACCAGTC
ATGGTGTTATCAGTCTTCTCAACAACAAAGGCTTCAACCTGACAAAGTTC
CAAAGTAACGACGAATCCGTTTTGAAGGACTTACCAACAGAAAAGCTTGC
TACTCAACCTACTGGGATTAAACTGGACGACAAGGTCATTTCTAGAGCAC
TAGGCGTTCACTGGGACCTTGAAACAGATTGTTTTGTTTACAAGGTCAAT
GTTGAAGTTGATCGATCAAAGCCATGTACCAAGAGATCCATCCTCAAGAA
GACAGCGACTATCTACGATCCACTTGGCCTCTTGACACCAATCACACTTG
TCGCCAAACTTTTCATGCAAGAACTATGGAGAGATAAAATTGAATGGGAC
GAGGAAGTTTCCAAATCTCTCAAAAATCGTTATGAAGATTGGCTTTGTCG
AATGTCTGACATTGCATCCACTGTTGCTATCCCACGAAGTCGCAACCTTG
AAGGTGACCAAGACGTGCAACTACATATCTTTTGTGACGCTTCCGAGAAG
GCATTTGCTGCGTTAGCTTATGTCAGGATCGAGAGTGAAGGAACTGTA

Coding sequence (CDS) from alignment at sc0000335_pilon:159593..160390-

>XLOC_043580 ID=XLOC_043580|Name=XLOC_043580|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1596bp|location=Sequence derived from alignment at sc0000335_pilon:159593..160390- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAACAGATTCCTGTGGAGAGACGATCCAAAGTCTCACAAACCTCCT
GATCACTCACTATAAATTACTCGTACACATTTTTGGGCTGACGGATTCTC
CCTGTGCTGCGACCTATGCCCTACAACGAGCTGCAAGAGATCAAGCTAAC
AACTATCCACCCGAAGTCATCAAAGCTGTCTTGATAAATTTCTATGTCGA
TGACTTACTCATGTCATATTCAAATGCTACATCTACCAAGGAGACCAGTC
ATGGTGTTATCAGTCTTCTCAACAACAAAGGCTTCAACCTGACAAAGTTC
CAAAGTAACGACGAATCCGTTTTGAAGGACTTACCAACAGAAAAGCTTGC
TACTCAACCTACTGGGATTAAACTGGACGACAAGGTCATTTCTAGAGCAC
TAGGCGTTCACTGGGACCTTGAAACAGATTGTTTTGTTTACAAGGTCAAT
GTTGAAGTTGATCGATCAAAGCCATGTACCAAGAGATCCATCCTCAAGAA
GACAGCGACTATCTACGATCCACTTGGCCTCTTGACACCAATCACACTTG
TCGCCAAACTTTTCATGCAAGAACTATGGAGAGATAAAATTGAATGGGAC
GAGGAAGTTTCCAAATCTCTCAAAAATCGTTATGAAGATTGGCTTTGTCG
AATGTCTGACATTGCATCCACTGTTGCTATCCCACGAAGTCGCAACCTTG
AAGGTGACCAAGACGTGCAACTACATATCTTTTGTGACGCTTCCGAGAAG
GCATTTGCTGCGTTAGCTTATGTCAGGATCGAGAGTGAAGGAACTGTAAT
GCAAACAGATTCCTGTGGAGAGACGATCCAAAGTCTCACAAACCTCCTGA
TCACTCACTATAAATTACTCGTACACATTTTTGGGCTGACGGATTCTCCC
TGTGCTGCGACCTATGCCCTACAACGAGCTGCAAGAGATCAAGCTAACAA
CTATCCACCCGAAGTCATCAAAGCTGTCTTGATAAATTTCTATGTCGATG
ACTTACTCATGTCATATTCAAATGCTACATCTACCAAGGAGACCAGTCAT
GGTGTTATCAGTCTTCTCAACAACAAAGGCTTCAACCTGACAAAGTTCCA
AAGTAACGACGAATCCGTTTTGAAGGACTTACCAACAGAAAAGCTTGCTA
CTCAACCTACTGGGATTAAACTGGACGACAAGGTCATTTCTAGAGCACTA
GGCGTTCACTGGGACCTTGAAACAGATTGTTTTGTTTACAAGGTCAATGT
TGAAGTTGATCGATCAAAGCCATGTACCAAGAGATCCATCCTCAAGAAGA
CAGCGACTATCTACGATCCACTTGGCCTCTTGACACCAATCACACTTGTC
GCCAAACTTTTCATGCAAGAACTATGGAGAGATAAAATTGAATGGGACGA
GGAAGTTTCCAAATCTCTCAAAAATCGTTATGAAGATTGGCTTTGTCGAA
TGTCTGACATTGCATCCACTGTTGCTATCCCACGAAGTCGCAACCTTGAA
GGTGACCAAGACGTGCAACTACATATCTTTTGTGACGCTTCCGAGAAGGC
ATTTGCTGCGTTAGCTTATGTCAGGATCGAGAGTGAAGGAACTGTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043580XLOC_043580-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000335_pilongenomesc0000335_pilon:159593..160390 -
Properties
Property NameValue
Aaloc1-798:799