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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000335_pilon:187515..191491+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043552 ID=XLOC_043552|Name=XLOC_043552|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3977bp|location=Sequence derived from alignment at sc0000335_pilon:187515..191491+ (Clytia hemisphaerica_ch_hm2_pilon)
gcTGGTTCTGATTCGTTGAATTGTTCCAAACCTGATCTTGATGGAAATAT
TGATTCTTCAAACAAATTGCAATATGAGTTTGGTGGGTACATATAATTCG
ATTCCcaaattatttcttttcatcattttttttcttcttatttttagaTG
TAAATTAACTGATATTGACCattacaatatattttcaatgtgaagttttt
gttcttttaataaTTCATCATTAAAAGTAACTGAATGTTTTAAATTGGTT
TTACCAGGATTGAATCTCAGTGAAATTAAGAAAAGTTTACTAGTTAAAAA
GGGTTTGTCCTACTTTCAATCTCATTAGATTGTTCTATTTTGTAGAACTA
TCAAAATTGAAACTTCCTGCTAAAATCAATATCAGAGGAAGACCTCGTGG
CTCACTTCTTACTACAATTGGTAACCGTAGGAAAAGAGATCGGAAAGGTA
GATGATAATAATTTTTAGATTGATTTTAGTCATTAATGCTTGCTACccgt
ttttcttttcaaactacCCATTTTGTTTAATGTATTTTCGAAATTTGTTC
TCTACAGTGTGTCTCGTATAAAGCGGTCATCTTTCACCCTATATGACTTC
ATCAAATTTATGCGTAATCACCAGAGAGAAGAAAGAATTGTTTACAAGTT
CAAATGTCTCTTAAAACTACAGTAATGACTATAATTATACTGTAATTCCC
AAATGTATTCTAATTtcaataagaaaagaaaagatttttcaatcgAAGTT
TCATTAATTTTGAGCATTTAAACATGACATTTTTACTAAGTTACtttttt
tAACCTAAACACGAAACATCGCCCCTTAGTGATAAAATTAACTGTATAaa
ttaaaaaggattttctttaTATACTTGAACTTTACCGCTTTATacgggac
acactgtatacaTGTATGCTGTTTAATTCTATGGAACATTTTCCTTTGTT
CTGATATATGTTGAGACACTGTAAGAATTGTGGCTAAACATTATCCTATC
ATTAGGGAATGCAATTGACAAGAAAAATAACAAGACGaaagaaaccaaag
aaaataaaacaccTGTCAGTAAAATACAGGATGTCGAGGCCATGGTATGC
TCGccaattctattttatttttggaaagaatataCGTATCGAATACCAAA
TTAATTTTAATAATTCCGATGATAGATCCAACATTACACCTTAACATTTG
GAGCATttttctctctaagggttattAAAAACCAACCCTCCCTGAGAATA
AAATCTTTTACTGTTACAAGGGTTGATAGGGGCAgtcttcattttaattt
ttcataatctTCTGTTTTAGGGTATCAATCCTGCTAACAATCAGAGATTC
ATAGAATTTTATCGGTATATTATAATTATCTCTACCTCTCTTTCCTATCA
AAATCAAGATAGTaagggcctatttgtttcatcacTATTTCTGCTACATT
TACTGTAAGTGCTCTCATTTCAATTTGTTCTGTCCAAATCTGTTGCACTT
CTTGTAAATAAACTTGCAAACTCCCTATtagcaaaaatagtaaaaacttC
AACCTTCTGCAAGCAAAgcaaaatcgcaatttcttcacagtaaaaattgc
atcTAAAATCAGACTGGATGATGTTTTCTTAGCCTGATTGCCGATTTTGA
ACCAATTAAATTAAAGAAGTGAAGAGCTGAAACTGTAGCTTGCTCCACGC
ACAGGTCTATATCAAAATAGAAGTTACTTTCATAATGGCGGGATAGTGGC
CACACAGCTGAGAATAAACAATGGATCCAAAgttactttttaaaattcaa
agcacaaaacaaaagaaagtccgaaaagattcattctgacatcaaaaatc
ttgaagtaACAGACGAAGTGATCGCAAGTAAAATATGCTATATTTCGTAT
TCTATCTAATACATCATTCAGGCAAAAAGTAAGTACAAAGAATAAAAgct
tctaccgggtgcgccacaaaaaagtttctctctttaaaagtaattttctt
gaaatctaaacattttaaaagaaccattcctattttattggaaagaagaa
gaataaacttaaattttgatgggtcatttattgaattcgattcattatat
caaaagttatgctcaattgaataaaaaagttacttttggaaagtgctcaa
aaacgttaaaaatcgacctatcaaattattcagaagcataattacatgat
atatcagtatttttgtttcagtcattaaaaatgataattagctgtcttaa
tgaccttttgttattaaaggaaggttgaatttaaatggaaggaagaaaat
tcgtcgaaataGGCCAAATAATCTGGTAGAATTcagaaaaatacatcaaa
tatgggtttcgaggtagattcagccttacatagacttaatccagtctaga
accaaaaatctgaggaaaatttcggtaaaactaaatcaaattaatcttga
tgaagattttgaaccctttcgacccttcagtttcaaaatttctgtgttta
gttaatgaaaaatgctcttaatcatgtaaaggctattgcgaatgccaaat
ttaaagtaaaaatttgataggtcgatttttaacgttttcgagcactttct
gaaagtaacatttATATTCAATtggacataacttttgatctaatgaatcg
aatttaataaatgacccatcaaaatttaagtctatctttcttctttccaa
tgaaataggaatggttcttttaaaatctttagatttcgagaaaattagtt
tcaaagagagaaacttttttgtggcgcacccggtatttatATAAAAGttc
aagatttttgatgttAGAATGAAGCTTTtcggactttcttttgttttatg
gttTTTAAAATGATCGGCTGGTTATGGATTCTGAACCAGGGATTATCAAG
ATGGCAGACAACAAAAGTTGCAATATTTGCtagcattttcaaagttttca
cgGACTTCATAGCACTTTTAGCAGATAGCATCTACAGCATTTAAAGTaag
tgaaacaaataggccTTAAATATCTCATGTATTAAGGATTGTTCATGCTC
TGCCTCAGAGCCAGAGCTTTCTTGTGTATAACGTATACCAAACCAAGTTG
CGGACCCCAGTAGACTATTGAaaagtagactagtaaaccacctCTGCGAT
TACAATGCACGCTCACGCTATTGCAGGCAACTACGTTAGCTTAAATGTTT
TTCCAACCACTCCCGCcatgtattttatttttttataagaatatttcctG
TCCGTGCGCTTGACTTTATAAGCACGATTCTCGCGTTTTACGAAAAACTG
TTAAAGGGAAAAACTATAGCAAGGTTGTTAAAGGTATGCATGTTATTTGA
CAGAcaattttggaactttttttctgagTAAGTAACGTGGAAATGGCTGA
TAGTTTTAGTCTGTTCAATATCTTTAACTATAGCTCTTCTGAATGGTATA
CaactatttttgctaaaaattattttagtgaATTGGAATACCCGGATCAG
CGTTCCATCATTCAGGTACCTGGAGATGGTCATTGTCTTTTGTATAGCTG
GGTAATCGCCCTTCGTGCATCAGAGAAGTCAGGTATCAGACCGAGTTACG
AGGAACTAAAGGCAATGTTGAGGCAAAGCTTTGCATCATACTATGGAGAA
GAACATCGAGAATTCATGTGTGACCAAGAGGTACGTTATTAACAgtatat
aataaataaaaactAATAGCTGTTAGGCgtaaaatcttttgtcaattTGT
CAATCAACACCAGTCTTGTTACTTAGTTCCTTAAGATATAATTAGCGTGA
AATTATTAATCTTAAGCTGACTTCACAAATTGTTTCATATAGGAAAACGT
AAACCTTCAAGACGAACTTAGTGAATTCATCGATCGAAAAAACTATGGCC
GTCAAGTTGGTGATGAGATGATAATCAATGTATTGGCGACCATTACTAAA
GTTCGAGTTGGCGTTTGGCAACGATAA Coding sequence (CDS) from alignment at sc0000335_pilon:187515..191491+ >XLOC_043552 ID=XLOC_043552|Name=XLOC_043552|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1308bp|location=Sequence derived from alignment at sc0000335_pilon:187515..191491+ (Clytia hemisphaerica_ch_hm2_pilon)
gcTGGTTCTGATTCGTTGAATTGTTCCAAACCTGATCTTGATGGAAATAT
TGATTCTTCAAACAAATTGCAATATGAGTTTGgcTGGTTCTGATTCGTTG
AATTGTTCCAAACCTGATCTTGATGGAAATATTGATTCTTCAAACAAATT
GCAATATGAGTTTGAACTATCAAAATTGAAACTTCCTGCTAAAATCAATA
TCAGAGGAAGACCTCGTGGCTCACTTCTTACTACAATTGGTAACCGTAGG
AAAAGAGATCGGAAAGAACTATCAAAATTGAAACTTCCTGCTAAAATCAA
TATCAGAGGAAGACCTCGTGGCTCACTTCTTACTACAATTGGTAACCGTA
GGAAAAGAGATCGGAAAGGGAATGCAATTGACAAGAAAAATAACAAGACG
aaagaaaccaaagaaaataaaacaccTGTCAGTAAAATACAGGATGTCGA
GGCCATGGGAATGCAATTGACAAGAAAAATAACAAGACGaaagaaaccaa
agaaaataaaacaccTGTCAGTAAAATACAGGATGTCGAGGCCATGGGTA
TCAATCCTGCTAACAATCAGAGATTCATAGAATTTTATCGGGTATCAATC
CTGCTAACAATCAGAGATTCATAGAATTTTATCGtgaATTGGAATACCCG
GATCAGCGTTCCATCATTCAGGTACCTGGAGATGGTCATTGTCTTTTGTA
TAGCTGGGTAATCGCCCTTCGTGCATCAGAGAAGTCAGGTATCAGACCGA
GTTACGAGGAACTAAAGGCAATGTTGAGGCAAAGCTTTGCATCATACTAT
GGAGAAGAACATCGAGAATTCATGTGTGACCAAGAGtgaATTGGAATACC
CGGATCAGCGTTCCATCATTCAGGTACCTGGAGATGGTCATTGTCTTTTG
TATAGCTGGGTAATCGCCCTTCGTGCATCAGAGAAGTCAGGTATCAGACC
GAGTTACGAGGAACTAAAGGCAATGTTGAGGCAAAGCTTTGCATCATACT
ATGGAGAAGAACATCGAGAATTCATGTGTGACCAAGAGGAAAACGTAAAC
CTTCAAGACGAACTTAGTGAATTCATCGATCGAAAAAACTATGGCCGTCA
AGTTGGTGATGAGATGATAATCAATGTATTGGCGACCATTACTAAAGTTC
GAGTTGGCGTTTGGCAACGATAAGAAAACGTAAACCTTCAAGACGAACTT
AGTGAATTCATCGATCGAAAAAACTATGGCCGTCAAGTTGGTGATGAGAT
GATAATCAATGTATTGGCGACCATTACTAAAGTTCGAGTTGGCGTTTGGC
AACGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000335_pilon | genome | sc0000335_pilon:187515..191491 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 520-654:3843 |
| Aaloc | 319-519:3480 |
| Aaloc | 274-315:1321 |
| Aaloc | 187-273:1008 |
| Aaloc | 85-183:348 |
| Aaloc | 1-81:1 |
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