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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000335_pilon:204808..208743+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043551 ID=XLOC_043551|Name=XLOC_043551|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3936bp|location=Sequence derived from alignment at sc0000335_pilon:204808..208743+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAAGACATTTCGAAGGTGTACAAACGTGGCAAATAAATTCAACCCA
ACACCCGAAACAAACTGATATGATATCATGTGGCGCGTTTTGCTTAAAGG
TAAGGTTTTCCTTGTGCTGGAACTAATAAAATTCACTACTTCGACATCAG
ATGTTCTGACAGGTGTCCTTGAATTCAAACTTACTCTCAGGTCTCTAATA
GTTAGGTATTTTAGCATGTTTTCTCTGCATCCAAAATAGTTATGCTTTGT
TTACTGCtttttttAAATACGTTTCATTATGTTTTAATAGTTTGCAGAGT
GTATCTTGAAGGGGGAAGATCTTCCAGCCAACATTTCATCATGTGACATG
AATGATTTTCGCCGCGAAATTGCTATCAACCTCATACAAATAGGCGGTAA
GCAAAATTTTTGTTGCTGTAGGAGAGAATTTTGAAATGCAAGTGAGAGAT
AGCATCCTCCCTGGTAGATCTTTTAAATAGTGATTATTATCCACAAAACG
CGACTATTACAATATATTTAGATTATCCAAACTCCGCtcttttttatgtt
caaatattgACTGCGTTGCAATACACTGGGGGATCAGTGTACAATGGTGg
atatttcagaatttttttgctGTGTATTCGttgtaccttaaaggaagaaa
ttttggcgggaatttaatttggcggatggctggaaaaattaaatttgaag
ggaatttaatttggcggttgcagggtatttttggccaaaatcgttatcaa
ataaacaaaaaaacctgttttaaggcttgaaatagcacCAATTTGGGGAA
Tgcgttaaataaaataaatttgacagaaatttaatttggcggatggagga
aagaataaatttttggcgggaaatcgatttggctgattttggttaaattt
tctttccgcaaaaatttgttcctttaaggtagtgGTAGTCACGTCAAAAT
CTGTTTTGacgtaaaaaattgaaaaaagctttCATGTATTCATGTATTCT
GTATCTGTAAAAATTGGATGAATTTTAAGCTTTTCAGTGGAAATTTTTAA
GGAGTAAGTATATTTGGAAGCTTGTTGGCTAGTACTTGTATTACAGTCAA
CACAACGCAACAGTCTCGAACACCCGCTATCTCGAACTTTAACTATCAAA
CTTTTTCCTCTGTGCCTTGAGGCACATTCTAGGCTAATtaattaatataa
tttttttagtgTATTTAAAGTCAGAAGGTTGGGGTTATTTTTAAACAGCT
ATTGTGTCGCTGTAGATTGTTTTATTTAATGTTCACACATGATTCAATAA
CAGGTGACGGTGATTGGTGCAGAAATATATGCCGCTTATGTGATCGAACC
TCACCACCACCATCAAAACGTGCAGGAACGAACCCGAAGGAATGGGGATG
GGTAATTATTAATTTAGAAAGTTAGGAAGACATTCACGCTCGGGTGCCTA
ACCGGACCTGtttatattaatttttgaaaaaaaatcccacTTGcggaaat
gaaagaaattttttctctAAACAGCCTATTTTTACCATATGTTTGGGTCT
TCAGGAGTATATTTTCTAACTCCCATTAGTATATTTTTTCAGAGACACAT
CGATTTTAGATTCGTATTTATCTCGACTTCTATCCGGCTAGTAGGTTAGA
TATGAATCGATTAGACAAGTTTGAGTACAATTTACTAGTTCTCTTCTTAA
ATGTGAAAATGTTTACCGGTCCTTTAAATgttattttcaacaaatttaaC
GACATTTTCATTTCGATACTTTTCTTTGATAGGTATGTTGTGACAAATGT
GAGCCAGAAATGTGGTACCATGGGGTTTGTCTTGGAATAAGAAGGAGCAC
CGAGCACCTGAAAAACGTCTCCTTTTATTGCAACAAAGTAAGTACTCGGT
ACAACCAAAATATTCGTCTCTTTCAACTGATGAAAATCTATACCACGAGG
TGAACTATTATGCTAAactctgttcacgataagtgtgaaaaaagaacaaa
aaaaacaacttggGGCCAATCAGCtgtaaactttgtttgatattttctta
TTGATTGAATACTTTCAGTAACGACGTTCTAAGATCAAAGTTTCattcct
gtgaaaatgatagttataacTCTAtaagtttttcgaaaattaaaaaataa
acttatTTATTCCACTCATCAacatctttccaacggtaccaaaGGTTata
gacaaaacaaaaaaaaactgcacacttatcgtgaacagacttctcgggta
aattaatgcgtgtccaaattttcgttaattcttcggacccatcatcaccc
ctcctagcataataaattatacctttaaagaagtgcattacgatgtagaa
catgaaaatcggtgttacttaaatttaggttttgccaattttgcgaaaaa
ccgcaaaaaccaaaaaatgctgacgtcagcaaaacttgttttttaaataa
ctccagtttggctaatggtataaacatgaaatttggaccaaagttgcata
tcattaataaaaacatttttgcataatcttttttttcaaattttgctgac
gtcagcagaaatcagcaaaatacgaaaatttgcaataaagtgcagacatc
agcaaaattttaaaaaaatttttcttcaaaatgatccttttaatgatgtg
caactttggtgcaaatttcatgttcataccattagccaaactggagttat
ttaaaaataaagttttgctgacgtcagcattttttggtttttgtggtttt
tcgcaaaattggcaaaacctaaatttaagtaacaccgattttcatgttct
acatcgtaatgcgcttctttaaaggtataatttattatgctaggaggggt
gacgatgggtccgaagaattaacgaaaatttggacacgcattaatttacc
cgagtttAGACTTTGGCCTCTAccctttttcgaaaaatgtttctACCCCT
GGTCAAAAGGACCTTTCATTATGGTCTACACTATAGATAGGGaacaaaat
tttcaaggaaTCAAACATTTTATCAaggctagaaaaaatattttatgatt
tttgatgaGTCAGCTGTTACTTTCAGAATCTTTGGCCGGGCCATAGCttt
cattagcgagtttatgtatgtgtgtttttcagcgacggagacggtaaggt
tctaatttgagtagatcctgaccagctgaagacgacggtaaatcagcagt
tttaccgtcctcgattttgcggggcagaattgcgggtttttccaaatcgc
atcagtcactctaccgtccttaaaagtgcaaatacataaactcggtaata
agaGACAATGCCTCGAAGTCAATTTGTTATAGAATGGAGTGAAATCAATG
AAACTTAACTTActgcgaaagtttcttcccctAAAGTATTTAGAAAGGTT
TAGAACTTAGCCTTAAAATAAGCAATATATGACATTTCCTTGGATTGTAT
TGCTCTTTGTGTAATAAAAGACATAAGAAGACAAAAATTCCATCAGATTA
AAACTTGCCTTTTTCTTTATCTCTCTTATCAAGTGTTCCTTTAAttgaat
ttcatatttttctaattGTTCAGCCGGTGGTCCAAGATGAAATCCTTGCT
TTGGAAGTTGGCGAGACGTTGATCCGTCAacgaaaaaacagaaaaatttc
caaatgcTACGGGTGTAGTGTACCAATCAAAAACGCGCCATTGGAAGCGC
CATACGACATGGTACTTGTACAGAAGATGCTGGGTCCGAGAAAGGGTGGT
AAGATCACAGACGACCCCAGCACTTTTGTCAACTACGTCTGCAATTACCA
CCCGGATAGAAAATGCACAACAAAAATCAATATCGTTAATGATAAGATAA
AGATCTCCAAAGACTTCAAAACCATCGAAGTCAGTCATCAAGAAAAACTG
GAGGATCTAGGTATTGACATTAGTGTGTTGAATTGA Coding sequence (CDS) from alignment at sc0000335_pilon:204808..208743+ >XLOC_043551 ID=XLOC_043551|Name=XLOC_043551|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1542bp|location=Sequence derived from alignment at sc0000335_pilon:204808..208743+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAAGACATTTCGAAGGTGTACAAACGTGGCAAATAAATTCAACCCA
ACACCCGAAACAAACTGATATGATATCATGTGGCGCGTTTTGCTTAAAGA
TGACAAGACATTTCGAAGGTGTACAAACGTGGCAAATAAATTCAACCCAA
CACCCGAAACAAACTGATATGATATCATGTGGCGCGTTTTGCTTAAAGTT
TGCAGAGTGTATCTTGAAGGGGGAAGATCTTCCAGCCAACATTTCATCAT
GTGACATGAATGATTTTCGCCGCGAAATTGCTATCAACCTCATACAAATA
GGCGTTTGCAGAGTGTATCTTGAAGGGGGAAGATCTTCCAGCCAACATTT
CATCATGTGACATGAATGATTTTCGCCGCGAAATTGCTATCAACCTCATA
CAAATAGGCGGTGACGGTGATTGGTGCAGAAATATATGCCGCTTATGTGA
TCGAACCTCACCACCACCATCAAAACGTGCAGGAACGAACCCGAAGGAAT
GGGGATGGGTGACGGTGATTGGTGCAGAAATATATGCCGCTTATGTGATC
GAACCTCACCACCACCATCAAAACGTGCAGGAACGAACCCGAAGGAATGG
GGATGGGTATGTTGTGACAAATGTGAGCCAGAAATGTGGTACCATGGGGT
TTGTCTTGGAATAAGAAGGAGCACCGAGCACCTGAAAAACGTCTCCTTTT
ATTGCAACAAAGTATGTTGTGACAAATGTGAGCCAGAAATGTGGTACCAT
GGGGTTTGTCTTGGAATAAGAAGGAGCACCGAGCACCTGAAAAACGTCTC
CTTTTATTGCAACAAACCGGTGGTCCAAGATGAAATCCTTGCTTTGGAAG
TTGGCGAGACGTTGATCCGTCAacgaaaaaacagaaaaatttccaaatgc
TACGGGTGTAGTGTACCAATCAAAAACGCGCCATTGGAAGCGCCATACGA
CATGGTACTTGTACAGAAGATGCTGGGTCCGAGAAAGGGTGGTAAGATCA
CAGACGACCCCAGCACTTTTGTCAACTACGTCTGCAATTACCACCCGGAT
AGAAAATGCACAACAAAAATCAATATCGTTAATGATAAGATAAAGATCTC
CAAAGACTTCAAAACCATCGAAGTCAGTCATCAAGAAAAACTGGAGGATC
TAGGTATTGACATTAGTGTGTTGAATTGACCGGTGGTCCAAGATGAAATC
CTTGCTTTGGAAGTTGGCGAGACGTTGATCCGTCAacgaaaaaacagaaa
aatttccaaatgcTACGGGTGTAGTGTACCAATCAAAAACGCGCCATTGG
AAGCGCCATACGACATGGTACTTGTACAGAAGATGCTGGGTCCGAGAAAG
GGTGGTAAGATCACAGACGACCCCAGCACTTTTGTCAACTACGTCTGCAA
TTACCACCCGGATAGAAAATGCACAACAAAAATCAATATCGTTAATGATA
AGATAAAGATCTCCAAAGACTTCAAAACCATCGAAGTCAGTCATCAAGAA
AAACTGGAGGATCTAGGTATTGACATTAGTGTGTTGAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000335_pilon | genome | sc0000335_pilon:204808..208743 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 409-771:3574 |
| Aaloc | 304-408:1783 |
| Aaloc | 208-303:1306 |
| Aaloc | 100-204:291 |
| Aaloc | 1-99:1 |
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