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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000015_pilon:539117..541273+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043545 ID=XLOC_043545|Name=XLOC_043545|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2157bp|location=Sequence derived from alignment at sc0000015_pilon:539117..541273+ (Clytia hemisphaerica_ch_hm2_pilon)
GATGAACCATTGGGAACTGTTGTGGAAAGGTAACTTAAATTCTAGAATCA
AAGAATTAAAAGGATTGGGTTGTACAGCGTGTCCACTTCACTACTTGTAC
AATCTtctttttggccatcgaagctacAAAGTACTGAGTGTATACTGTTT
CATTTATTTTAGGATGAAAATGTCCAGGTTACATATTCTTTTGGTCTTAT
TGTCCTGTGCTGTCTTTTGCAAAGCAGAAGAGCATGAAATCAAGGCAGGA
TCAATCATTAAGCATGTACCAACATTGGGGAATTCATACTCCATTGATGT
CGATATCAAGTTAACAGGAATCAGCACaagattttccaatattttgtcAG
CTACTTTTAATAATCGTACCAGAAAAAGTCCTCAAGCTCCTTCAATATAT
GTGAGAAAGAACTCCACAGATATCATGCTCTTCAACTCATTGAACAACAA
ACATATGTATCTTGTCAACAAATCACTACCTTTGAATGAGTACGTCAACA
TAAAAATCCGTCAAGCCAAAATGTTTGATGGTACTTATCATTACATGGTG
CTTGTTGATGGACAAAAGATCTTTTCAGCCATCAATTCGAACCCAGTCTC
TTTTGAAAACGTTACCTATTATGCTTCAAAACCACGAGTGACTCAGGCTA
ATGCAATgatcagaaatttcaaaattcactcACCGATTCCTGATACATGT
AAGAAAGTTTTTCTTATCCCAACccacttttttgagaaatactTGTTTTA
AACCATGGGTTTTTATTATCATGTCATTTTATCCATATGGTGCATGTTTG
TGTTAACTTACAGGATAGTAATTTTaagtaaaatgtaaaatgacgAGATT
TTGGGGATGGAACTTTTGCAAATTGGGGGAGCAAAATAGAACTCTAATCT
AAAACATTTTTATCAACAtacatttttaagatttcaagGCACACAAAGGC
CAATTGGTGCGCTTCATTCGTCGTTTGCAACCATCATACAAGTTCACTTT
TACCATCAACCCTTTGGGATATATCGCTGGCGAATCTAACATTCTTCGAG
TGACCAATACAGAACAAGATTGTTGTAACCATGGCGATAGAATCCCTGGT
CTTTTCTTCGCCCCAAACTCCACAAATCTGTTAATCAGAAACGCAATCAA
CGGTAACGGTAACCAACTGGTCAACAAAACTATCCCATTATATCATACTA
CCTATGTCACTATTTTACAACGGCAATACGGACAAGAGCGTTACCGGTAT
TCGATTTCCATCAATGCTACAGAAATTTATCGGGCAATCAACAATCGATT
TGTTCCTTATGATAATGTGACGGTCTGGATGAGTGACAAGTTCCACACAG
CTGCTAATGTGATTGTCGATCGTTTTGAATATCAAACTCCAATACCAGAA
TATGGTAAGATAATCAAtcaataataatttattttatcaaaatttgtatg
AGAGCTTAGTTTGattgaaaagctcatttttcagGAAGTCTCAAGCCTTT
CTTCAGACAAAGTAGCCAAAGGGGATTCATACTAACGAGGAGACCGAATT
TCCCTGTTTATTTCAGGTAGTTCACCTTTAGTTAATTAAGATATtctatt
tcttttcaaaacaaacttttctctCGTATTAGATCATTTTTTCTTCGAAT
TCACAATTTTGAAATACGATAATCTTTTAATGTTTAGGTTTCCAATATCA
ACCAGCCATGAACACTTTCCATGACGAAATCCCTTACATCAGTAAAGCAT
ACAAATTCGAATTCCAAGTCAAACTGAATGGTACAAGTCCATTTATGACC
AACATTCTACAAGTAACATCACGGCCTCTGCAAAATTACCGCGCAACTGT
CACTTCCGTGGAAGTCCAACCCAACTCAGCATCATTGAAGATTCGACACA
GGGTAGGGCTATACAAAAAGAATCGATCATTTTCCCTACATATCGGAAGT
AATCGATTCATGCGAGTTCGAATCATGCAGTTCCTCGATTGCAACGACAA
ATATCGATTCTCCATATATTTCAATAATGTAGAGGTTTTCTCCCTCACAA
ACACGCGTCCAAGAGAGTTCTTCAATTCAGTGGTATTTTTTGGAGCACCT
CGAAAACGAGCGGCCACAAACAGCATCATTCGGAATTACTCATTTATAAA
CCTTTGA Coding sequence (CDS) from alignment at sc0000015_pilon:539117..541273+ >XLOC_043545 ID=XLOC_043545|Name=XLOC_043545|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3018bp|location=Sequence derived from alignment at sc0000015_pilon:539117..541273+ (Clytia hemisphaerica_ch_hm2_pilon)
GATGAACCATTGGGAACTGTTGTGGAAAGGATGAACCATTGGGAACTGTT
GTGGAAAGGATGAAAATGTCCAGGTTACATATTCTTTTGGTCTTATTGTC
CTGTGCTGTCTTTTGCAAAGCAGAAGAGCATGAAATCAAGGCAGGATCAA
TCATTAAGCATGTACCAACATTGGGGAATTCATACTCCATTGATGTCGAT
ATCAAGTTAACAGGAATCAGCACaagattttccaatattttgtcAGCTAC
TTTTAATAATCGTACCAGAAAAAGTCCTCAAGCTCCTTCAATATATGTGA
GAAAGAACTCCACAGATATCATGCTCTTCAACTCATTGAACAACAAACAT
ATGTATCTTGTCAACAAATCACTACCTTTGAATGAGTACGTCAACATAAA
AATCCGTCAAGCCAAAATGTTTGATGGTACTTATCATTACATGGTGCTTG
TTGATGGACAAAAGATCTTTTCAGCCATCAATTCGAACCCAGTCTCTTTT
GAAAACGTTACCTATTATGCTTCAAAACCACGAGTGACTCAGGCTAATGC
AATgatcagaaatttcaaaattcactcACCGATTCCTGATACATGATGAA
AATGTCCAGGTTACATATTCTTTTGGTCTTATTGTCCTGTGCTGTCTTTT
GCAAAGCAGAAGAGCATGAAATCAAGGCAGGATCAATCATTAAGCATGTA
CCAACATTGGGGAATTCATACTCCATTGATGTCGATATCAAGTTAACAGG
AATCAGCACaagattttccaatattttgtcAGCTACTTTTAATAATCGTA
CCAGAAAAAGTCCTCAAGCTCCTTCAATATATGTGAGAAAGAACTCCACA
GATATCATGCTCTTCAACTCATTGAACAACAAACATATGTATCTTGTCAA
CAAATCACTACCTTTGAATGAGTACGTCAACATAAAAATCCGTCAAGCCA
AAATGTTTGATGGTACTTATCATTACATGGTGCTTGTTGATGGACAAAAG
ATCTTTTCAGCCATCAATTCGAACCCAGTCTCTTTTGAAAACGTTACCTA
TTATGCTTCAAAACCACGAGTGACTCAGGCTAATGCAATgatcagaaatt
tcaaaattcactcACCGATTCCTGATACATatttcaagGCACACAAAGGC
CAATTGGTGCGCTTCATTCGTCGTTTGCAACCATCATACAAGTTCACTTT
TACCATCAACCCTTTGGGATATATCGCTGGCGAATCTAACATTCTTCGAG
TGACCAATACAGAACAAGATTGTTGTAACCATGGCGATAGAATCCCTGGT
CTTTTCTTCGCCCCAAACTCCACAAATCTGTTAATCAGAAACGCAATCAA
CGGTAACGGTAACCAACTGGTCAACAAAACTATCCCATTATATCATACTA
CCTATGTCACTATTTTACAACGGCAATACGGACAAGAGCGTTACCGGTAT
TCGATTTCCATCAATGCTACAGAAATTTATCGGGCAATCAACAATCGATT
TGTTCCTTATGATAATGTGACGGTCTGGATGAGTGACAAGTTCCACACAG
CTGCTAATGTGATTGTCGATCGTTTTGAATATCAAACTCCAATACCAGAA
TATGatttcaagGCACACAAAGGCCAATTGGTGCGCTTCATTCGTCGTTT
GCAACCATCATACAAGTTCACTTTTACCATCAACCCTTTGGGATATATCG
CTGGCGAATCTAACATTCTTCGAGTGACCAATACAGAACAAGATTGTTGT
AACCATGGCGATAGAATCCCTGGTCTTTTCTTCGCCCCAAACTCCACAAA
TCTGTTAATCAGAAACGCAATCAACGGTAACGGTAACCAACTGGTCAACA
AAACTATCCCATTATATCATACTACCTATGTCACTATTTTACAACGGCAA
TACGGACAAGAGCGTTACCGGTATTCGATTTCCATCAATGCTACAGAAAT
TTATCGGGCAATCAACAATCGATTTGTTCCTTATGATAATGTGACGGTCT
GGATGAGTGACAAGTTCCACACAGCTGCTAATGTGATTGTCGATCGTTTT
GAATATCAAACTCCAATACCAGAATATGGTTTCCAATATCAACCAGCCAT
GAACACTTTCCATGACGAAATCCCTTACATCAGTAAAGCATACAAATTCG
AATTCCAAGTCAAACTGAATGGTACAAGTCCATTTATGACCAACATTCTA
CAAGTAACATCACGGCCTCTGCAAAATTACCGCGCAACTGTCACTTCCGT
GGAAGTCCAACCCAACTCAGCATCATTGAAGATTCGACACAGGGTAGGGC
TATACAAAAAGAATCGATCATTTTCCCTACATATCGGAAGTAATCGATTC
ATGCGAGTTCGAATCATGCAGTTCCTCGATTGCAACGACAAATATCGATT
CTCCATATATTTCAATAATGTAGAGGTTTTCTCCCTCACAAACACGCGTC
CAAGAGAGTTCTTCAATTCAGTGGTATTTTTTGGAGCACCTCGAAAACGA
GCGGCCACAAACAGCATCATTCGGAATTACTCATTTATAAACCTTTGAGT
TTCCAATATCAACCAGCCATGAACACTTTCCATGACGAAATCCCTTACAT
CAGTAAAGCATACAAATTCGAATTCCAAGTCAAACTGAATGGTACAAGTC
CATTTATGACCAACATTCTACAAGTAACATCACGGCCTCTGCAAAATTAC
CGCGCAACTGTCACTTCCGTGGAAGTCCAACCCAACTCAGCATCATTGAA
GATTCGACACAGGGTAGGGCTATACAAAAAGAATCGATCATTTTCCCTAC
ATATCGGAAGTAATCGATTCATGCGAGTTCGAATCATGCAGTTCCTCGAT
TGCAACGACAAATATCGATTCTCCATATATTTCAATAATGTAGAGGTTTT
CTCCCTCACAAACACGCGTCCAAGAGAGTTCTTCAATTCAGTGGTATTTT
TTGGAGCACCTCGAAAACGAGCGGCCACAAACAGCATCATTCGGAATTAC
TCATTTATAAACCTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000015_pilon | genome | sc0000015_pilon:539117..541273 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1042-1509:1690 |
| Aaloc | 568-1038:933 |
| Aaloc | 31-564:164 |
| Aaloc | 1-27:1 |
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