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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000015_pilon:614728..616777+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043542 ID=XLOC_043542|Name=XLOC_043542|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2050bp|location=Sequence derived from alignment at sc0000015_pilon:614728..616777+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTTTGATGAAGACGAAGATGAGGAAGTTCAAGAGCTCTTCTTAGG
TAAATTAAAGAAGTATTAAGATTAGTTTTGTGTATATATACGGGAATATC
CCAACTCGAGTCCAGTTCctttttttatgattatgaTATTGTTCACAATT
GGTCAGTAAAATCATAATGTGGTACAAGTGGCTCTAGGTACAGCATTTGA
CATAGGTACATGATTTGAAGCATAAATCATGTTTAGAAAGAACACGAGAG
AATTGTCAACTATCATCGTCCAAAAGAAAAACTACaattatttctatttt
ctttgtTGAAGTAAGATTCGGGACATAAAGAAAGACACAAAATACGACGA
AAGTAAGAAAGccaaatttctttcttaaaaaatcggATGATTTCTACTTT
TCAGGTTCATATGAAGGGACACGAAATGATCGTGAAGAAAGACATGGTCG
AGGGAAGGCTATTTTGCCGAACGGGGATGTTTATGAAGGAGAGTATGAAA
ATGGAAAGAGACATGGTTATGGTGTTTACACGTAAGATGGAGAACGGATA
GAATTGATAAAGGTTTTATGTTTTTGAAGTGACATGACATCGTCTACAAT
TACTTTTGAGATCGTCGCCAGaaaaaaaGACCGTTCAGTTTGTAAATCAT
ATATTGCTAGGGATTAAATTTCATGACCTTATAATCTTTAAACGATGCAA
CTTTTAAGCATTCATATTCATCCATAGGTTTGTTTCTGGTGCAAAGTATT
TAGGTCACTATGTGCATGGTCGAAAAGATGGAAGTGGAAAACTTCACAAT
GAAGATGGATCCTTTTATGATGGAAATTGGACAAATGGTATGAAGTGTGG
AAAGGGTGTCAATTGTTACAGTAATGGAGATCGTTATCAAGGAGATTGGT
TTCATAACAAAAGACACGGGCATGGAAAATATGAGTTTAAAAAGACAGGT
AcaaatttgctttaaaaaagcTAACAAGTTTATTTTTCACCTCCCCGagt
aaaagattttcaacttTACATAAAAATCATATTGTCATAGCGACAATGAA
ACAAACCTTCTAAAAATTAAATGTAAAATAAACTTCTTaacttatgaatt
ttgaaatattcaggGGTGTCTGAAAGCTTAGgtaaagtcaataaaaaatg
tccaaaacTTAAACAACTGATGACAACTTTTTATCTCTCCAAAAACAGGG
AGCGTATACGATGGGCGCTGGGTGGATGGTCATTGGCATGGAATAGGTGA
ACTTATTCACCAAAATCATCGATACGTCGGAACCTTTGATCAAGGTCTCC
CTACTGGTAAAGGAAAGTAAGTATTCAAGTCACACTCAAtgggaatataa
atttgttCAATCTATTATGGAAGTTAGAGAATCGTTTATAAGAGTTAAAC
AAATGCCTTAAAAAGCCCAAAGCTTGTTCGAGTGGAGAAAACATTCAGGT
TTTAGAGACTTTGCTGTATTTTTAAAACCGTGACTACACTTAAACACGAA
ATTTATTAGATGATTAGATAGTccgaaaaaatattcaaattctgATATAA
ATCTTGCATATGAGCTCCACATTTTGAGAATTGGAAATTAAAGTAAATTA
CATAATGAATTccatttttatagaaatttagATTTAATGCATAAGTCTTG
TCTAGTAACAAAGATATAAAGAATAACAAATAGCTGAAATGTATTATTAA
GAATATATAGCGTCCATGTTTTAAGTCCCTAAAAtgtggagaaaaaaaat
tctaatacaaattaaattacaactacaaaaactttaacttaatttaaaaa
GTCTCAATAAGTAGAAAAGACCTAATTGGACAAAGTAGCAAACAATTTGT
TAACTTTATGTATCACGAAACCACCCGGTAAAACCACTTAAAAGGCACTA
AAACCAATTCTATTTTCACATTATAGGTATATTTTCAACAGTGGTATCGC
TCAACAtggatattttgaaatattgaaaaaaccTCGTATagatgtcatca
aaaatttgaatattgaaaacaaaactgacgAAGGAAACTGGGAACGACAA
Coding sequence (CDS) from alignment at sc0000015_pilon:614728..616777+ >XLOC_043542 ID=XLOC_043542|Name=XLOC_043542|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1278bp|location=Sequence derived from alignment at sc0000015_pilon:614728..616777+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTTTGATGAAGACGAAGATGAGGAAGTTCAAGAGCTCTTCTTAGA
TGTATTTTGATGAAGACGAAGATGAGGAAGTTCAAGAGCTCTTCTTAGGT
TCATATGAAGGGACACGAAATGATCGTGAAGAAAGACATGGTCGAGGGAA
GGCTATTTTGCCGAACGGGGATGTTTATGAAGGAGAGTATGAAAATGGAA
AGAGACATGGTTATGGTGTTTACACGTTCATATGAAGGGACACGAAATGA
TCGTGAAGAAAGACATGGTCGAGGGAAGGCTATTTTGCCGAACGGGGATG
TTTATGAAGGAGAGTATGAAAATGGAAAGAGACATGGTTATGGTGTTTAC
ACGTTTGTTTCTGGTGCAAAGTATTTAGGTCACTATGTGCATGGTCGAAA
AGATGGAAGTGGAAAACTTCACAATGAAGATGGATCCTTTTATGATGGAA
ATTGGACAAATGGTATGAAGTGTGGAAAGGGTGTCAATTGTTACAGTAAT
GGAGATCGTTATCAAGGAGATTGGTTTCATAACAAAAGACACGGGCATGG
AAAATATGAGTTTAAAAAGACAGGTTTGTTTCTGGTGCAAAGTATTTAGG
TCACTATGTGCATGGTCGAAAAGATGGAAGTGGAAAACTTCACAATGAAG
ATGGATCCTTTTATGATGGAAATTGGACAAATGGTATGAAGTGTGGAAAG
GGTGTCAATTGTTACAGTAATGGAGATCGTTATCAAGGAGATTGGTTTCA
TAACAAAAGACACGGGCATGGAAAATATGAGTTTAAAAAGACAGGGAGCG
TATACGATGGGCGCTGGGTGGATGGTCATTGGCATGGAATAGGTGAACTT
ATTCACCAAAATCATCGATACGTCGGAACCTTTGATCAAGGTCTCCCTAC
TGGTAAAGGAAAGGAGCGTATACGATGGGCGCTGGGTGGATGGTCATTGG
CATGGAATAGGTGAACTTATTCACCAAAATCATCGATACGTCGGAACCTT
TGATCAAGGTCTCCCTACTGGTAAAGGAAAGTATATTTTCAACAGTGGTA
TCGCTCAACAtggatattttgaaatattgaaaaaaccTCGTATagatgtc
atcaaaaatttgaatattgaaaacaaaactgacgAAGGAAACTGGGAACG
ACAAGTATATTTTCAACAGTGGTATCGCTCAACAtggatattttgaaata
ttgaaaaaaccTCGTATagatgtcatcaaaaatttgaatattgaaaacaa
aactgacgAAGGAAACTGGGAACGACAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000015_pilon | genome | sc0000015_pilon:614728..616777 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 517-639:1928 |
| Aaloc | 400-513:1201 |
| Aaloc | 178-396:729 |
| Aaloc | 52-174:407 |
| Aaloc | 1-48:1 |
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