XLOC_043538 (mRNA) -

Overview
NameXLOC_043538
Unique NameXLOC_043538
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000335_pilon:160627..161481-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043538 ID=XLOC_043538|Name=XLOC_043538|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=855bp|location=Sequence derived from alignment at sc0000335_pilon:160627..161481- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGGTTGATACATACGCCATGCTAGATACTGGCAGTCAATGTACTCT TATTACCAAATCACTTTGCAAGGAACTAAATCTTCAAGGAAGAAAGACTA AAATCAACTTTGGTACAATCAGAGATAGTACTATTTTACCGACAAAGCTG GTTGATCTCACCATCGCAGCTGTTGACGGCAGTTACCAGACTAAAGTGAA AAATGTGTACTCCCTCAATGATTCGGATTTCAATGTACCAGGACAAGAAG TTCCAGTAACAACTGATTCTAGCTGGGATTACATCAGAGATCTCGGTCTT AAAGATATCGACATCAGCCAAGTACAACTACTGATTGGTGCTGATGTTCC AGATGTTCTCATCAGCAATGATTTCAGGAAGTCAAAGAAAGGCTACCCAT ATGCTTCAAAGACTCGACTCGGTTGGACTCTGCTTGGAGTGTATGATGGT ACTTCAGACCCAATTGAAAGTCGACTTGTTGCACTGACCAGAATTTTGGG GATCAGAAGTGAACTCTCTGAGGTTGAATACAGCAGTTTCTGGGAGACTG AATCATTTGGTACTGAGGTCAAAGAAAGCAAATCACGTTCTATCGACGAT CAACGTAACCAAGAAATTCTTGACAAAGAAACTGAATTCAAAGATGGTCA CTACATGGTACCAATGCTTCGGAAGAAGGACGTCAACCTGCCTGAAAGCA AAATCTTGGCTGAGAGACGCCTCAACCAAATTTGCAGGAAGTTCCAATCC AATCCTGACTTCTTTGAAATGTATGCTAAGAATATATCATCCTACCTTGA GAAAGGATACATCAGAAAACTCTCAGACGAAGAAGCATTATGCCGCACAG CCACT

Coding sequence (CDS) from alignment at sc0000335_pilon:160627..161481-

>XLOC_043538 ID=XLOC_043538|Name=XLOC_043538|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1710bp|location=Sequence derived from alignment at sc0000335_pilon:160627..161481- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGGTTGATACATACGCCATGCTAGATACTGGCAGTCAATGTACTCT
TATTACCAAATCACTTTGCAAGGAACTAAATCTTCAAGGAAGAAAGACTA
AAATCAACTTTGGTACAATCAGAGATAGTACTATTTTACCGACAAAGCTG
GTTGATCTCACCATCGCAGCTGTTGACGGCAGTTACCAGACTAAAGTGAA
AAATGTGTACTCCCTCAATGATTCGGATTTCAATGTACCAGGACAAGAAG
TTCCAGTAACAACTGATTCTAGCTGGGATTACATCAGAGATCTCGGTCTT
AAAGATATCGACATCAGCCAAGTACAACTACTGATTGGTGCTGATGTTCC
AGATGTTCTCATCAGCAATGATTTCAGGAAGTCAAAGAAAGGCTACCCAT
ATGCTTCAAAGACTCGACTCGGTTGGACTCTGCTTGGAGTGTATGATGGT
ACTTCAGACCCAATTGAAAGTCGACTTGTTGCACTGACCAGAATTTTGGG
GATCAGAAGTGAACTCTCTGAGGTTGAATACAGCAGTTTCTGGGAGACTG
AATCATTTGGTACTGAGGTCAAAGAAAGCAAATCACGTTCTATCGACGAT
CAACGTAACCAAGAAATTCTTGACAAAGAAACTGAATTCAAAGATGGTCA
CTACATGGTACCAATGCTTCGGAAGAAGGACGTCAACCTGCCTGAAAGCA
AAATCTTGGCTGAGAGACGCCTCAACCAAATTTGCAGGAAGTTCCAATCC
AATCCTGACTTCTTTGAAATGTATGCTAAGAATATATCATCCTACCTTGA
GAAAGGATACATCAGAAAACTCTCAGACGAAGAAGCATTATGCCGCACAG
CCACTATGTGGGTTGATACATACGCCATGCTAGATACTGGCAGTCAATGT
ACTCTTATTACCAAATCACTTTGCAAGGAACTAAATCTTCAAGGAAGAAA
GACTAAAATCAACTTTGGTACAATCAGAGATAGTACTATTTTACCGACAA
AGCTGGTTGATCTCACCATCGCAGCTGTTGACGGCAGTTACCAGACTAAA
GTGAAAAATGTGTACTCCCTCAATGATTCGGATTTCAATGTACCAGGACA
AGAAGTTCCAGTAACAACTGATTCTAGCTGGGATTACATCAGAGATCTCG
GTCTTAAAGATATCGACATCAGCCAAGTACAACTACTGATTGGTGCTGAT
GTTCCAGATGTTCTCATCAGCAATGATTTCAGGAAGTCAAAGAAAGGCTA
CCCATATGCTTCAAAGACTCGACTCGGTTGGACTCTGCTTGGAGTGTATG
ATGGTACTTCAGACCCAATTGAAAGTCGACTTGTTGCACTGACCAGAATT
TTGGGGATCAGAAGTGAACTCTCTGAGGTTGAATACAGCAGTTTCTGGGA
GACTGAATCATTTGGTACTGAGGTCAAAGAAAGCAAATCACGTTCTATCG
ACGATCAACGTAACCAAGAAATTCTTGACAAAGAAACTGAATTCAAAGAT
GGTCACTACATGGTACCAATGCTTCGGAAGAAGGACGTCAACCTGCCTGA
AAGCAAAATCTTGGCTGAGAGACGCCTCAACCAAATTTGCAGGAAGTTCC
AATCCAATCCTGACTTCTTTGAAATGTATGCTAAGAATATATCATCCTAC
CTTGAGAAAGGATACATCAGAAAACTCTCAGACGAAGAAGCATTATGCCG
CACAGCCACT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043538XLOC_043538-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000335_pilongenomesc0000335_pilon:160627..161481 -
Properties
Property NameValue
Aaloc1-855:856