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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000015_pilon:385734..386905- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043530 ID=XLOC_043530|Name=XLOC_043530|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1172bp|location=Sequence derived from alignment at sc0000015_pilon:385734..386905- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTTCATCTAGTGTATTTTGTACCCTTAGTAAACTTGGTAACCAA
GAATGCAGATTCCAGAACCTTTGTTTTTATAACAATCAATACACTTACTA
TTATGGCAAAAACTCTAAAGAAGAAGGATTACAATCAGAATCACCTTTTC
TACTTGATTTATCAAGTGTAAGAAACCATAATGCAAAATACTTTCAATTT
TCTAATAGAACTATGACAAAAAACACGAAATTTCATTATATTCGTGGCAA
CACAATTTTGTTTCATCGATTCAATCCTGATAACCTGATGCATGTTATCC
ATGACGATTTACTTCCTTACTTTCACACTAGGCGGAAATATTTTGACGGT
AAAGAAGTGACTACTATCTTCATGGAGGGGCGTGAAGATGGGCCTTTTTA
TGATTTATACACCTTATTCATGGAACGGATATTAACAGAGAGAAATCTCA
CTTCGATGACCTGCTTTGAGAATGTCATTATTGGTGTAAGTCAAGAGGTC
ACATGGTACCAATATGGTTTCCATACCCCTCAAGGACCAATCAATGTTGA
GAATTATCCAACAAATGAATTACTTTCTTTCAAAGATGAATTTATGAAGC
GATTGAAGATGAATATGGATCAATCATTCACTCTATCGAAGGTAGTTATC
TTCAAACGCCAAGACACTAGACGAATTACAAATATGAACGAGTTAGTATT
GAAACTATCAATGAGGTTCAAAGCTGAGGTTACCATATTGGATTTACAAG
AGGACACTTTTGAAGACATCCTAACAGCAGTATCTAATGCCAAGCTTTTG
ATTGGTGTTCATGGTGCCCATTTAGTTACCAGTCTCTTTCTCCCTCCTGG
TGCCTTATTAATGGAAATTTATCCTTATGGGATACCTTCGGAGAACTATA
CACCATACAAAACTCTTGTATCGCTCATTGGGGTCCAGTATTTAGCCTTT
GAAACAGAATCAGAAGACTTGTCAACGAATTTTATCGACCGCCCACCAAA
TCAAGGCGGTATCGCACACCTACCACCACACCAAAAAGAGGAAATTTTGA
ACACAAAGAGAGTTCCCGAACATCTTTGTTGTGACAACCCTTTCTGGTTG
TTTAGGATTTACCAAGACACCGAGGTTGATATCAATAGGTTTTTACCACT
TTTACATGGTAGAATTTCCTAA Coding sequence (CDS) from alignment at sc0000015_pilon:385734..386905- >XLOC_043530 ID=XLOC_043530|Name=XLOC_043530|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2016bp|location=Sequence derived from alignment at sc0000015_pilon:385734..386905- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTTCATCTAGTGTATTTTGTACCCTTAGTAAACTTGGTAACCAA
GAATGCAGATTCCAGAACCTTTGTTTTTATAACAATCAATACACTTACTA
TTATGGCAAAAACTCTAAAGAAGAAGGATTACAATCAGAATCACCTTTTC
TACTTGATTTATCAAGTATGAAATTTCATCTAGTGTATTTTGTACCCTTA
GTAAACTTGGTAACCAAGAATGCAGATTCCAGAACCTTTGTTTTTATAAC
AATCAATACACTTACTATTATGGCAAAAACTCTAAAGAAGAAGGATTACA
ATCAGAATCACCTTTTCTACTTGATTTATCAAGTGCGGAAATATTTTGAC
GGTAAAGAAGTGACTACTATCTTCATGGAGGGGCGTGAAGATGGGCCTTT
TTATGATTTATACACCTTATTCATGGAACGGATATTAACAGAGAGAAATC
TCACTTCGATGACCTGCTTTGAGAATGTCATTATTGGTGTAAGTCAAGAG
GTCACATGGTACCAATATGGTTTCCATACCCCTCAAGGACCAATCAATGT
TGAGAATTATCCAACAAATGAATTACTTTCTTTCAAAGATGAATTTATGA
AGCGATTGAAGATGAATATGGATCAATCATTCACTCTATCGAAGGTAGTT
ATCTTCAAACGCCAAGACACTAGACGAATTACAAATATGAACGAGTTAGT
ATTGAAACTATCAATGAGGTTCAAAGCTGAGGTTACCATATTGGATTTAC
AAGAGGACACTTTTGAAGACATCCTAACAGCAGTATCTAATGCCAAGCTT
TTGATTGGTGTTCATGGTGCCCATTTAGTTACCAGTCTCTTTCTCCCTCC
TGGTGCCTTATTAATGGAAATTTATCCTTATGGGATACCTTCGGAGAACT
ATACACCATACAAAACTCTTGTATCGCTCATTGGGGTCCAGTATTTAGCC
TTTGAAACAGAATCAGAAGACTTGTCAACGAATTTTATCGACCGCCCACC
AAATCAAGGCGGTATCGCACACCTACCACCACACCAAAAAGAGGAAATTT
TGAACACAAAGAGAGTTCCCGAACATCTTTGTTGTGACAACCCTTTCTGG
TTGTTTAGGATTTACCAAGACACCGAGGTTGATATCAATAGGTTTTTACC
ACTTTTACATGGTAGAATTTCCTAAGCGGAAATATTTTGACGGTAAAGAA
GTGACTACTATCTTCATGGAGGGGCGTGAAGATGGGCCTTTTTATGATTT
ATACACCTTATTCATGGAACGGATATTAACAGAGAGAAATCTCACTTCGA
TGACCTGCTTTGAGAATGTCATTATTGGTGTAAGTCAAGAGGTCACATGG
TACCAATATGGTTTCCATACCCCTCAAGGACCAATCAATGTTGAGAATTA
TCCAACAAATGAATTACTTTCTTTCAAAGATGAATTTATGAAGCGATTGA
AGATGAATATGGATCAATCATTCACTCTATCGAAGGTAGTTATCTTCAAA
CGCCAAGACACTAGACGAATTACAAATATGAACGAGTTAGTATTGAAACT
ATCAATGAGGTTCAAAGCTGAGGTTACCATATTGGATTTACAAGAGGACA
CTTTTGAAGACATCCTAACAGCAGTATCTAATGCCAAGCTTTTGATTGGT
GTTCATGGTGCCCATTTAGTTACCAGTCTCTTTCTCCCTCCTGGTGCCTT
ATTAATGGAAATTTATCCTTATGGGATACCTTCGGAGAACTATACACCAT
ACAAAACTCTTGTATCGCTCATTGGGGTCCAGTATTTAGCCTTTGAAACA
GAATCAGAAGACTTGTCAACGAATTTTATCGACCGCCCACCAAATCAAGG
CGGTATCGCACACCTACCACCACACCAAAAAGAGGAAATTTTGAACACAA
AGAGAGTTCCCGAACATCTTTGTTGTGACAACCCTTTCTGGTTGTTTAGG
ATTTACCAAGACACCGAGGTTGATATCAATAGGTTTTTACCACTTTTACA
TGGTAGAATTTCCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000015_pilon | genome | sc0000015_pilon:385734..386905 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 169-1008:841 |
| Aaloc | 1-165:1173 |
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