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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000015_pilon:408818..411800- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043528 ID=XLOC_043528|Name=XLOC_043528|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2983bp|location=Sequence derived from alignment at sc0000015_pilon:408818..411800- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAACGACTAAAGTCCATCACAGGAGATTTTCAAACCTCGGGTACCA
CCAAAGAAGAGAAATCGACGACAAATAATCCTCGACAAATAAGGTGAAAA
TTGCGTGCAAAAATTGATCAATAGGATCCAAAGATATTCTAGACCAACCA
ATTTGGTATAAATAGGGCAAGCTTTTCTAACTTCAAATCATCTTATTCAT
TCACTACCAAGCATCAGATGAATACACCAGCCTACTTCGGAAAGATGAAG
TTTGGGGTGTTATTACTCCTTGTTGCCTGTGTTGGTAAGTTGACCATTTC
AGTTTTACTTTTTTTTCACTCGACATAAATTGTCTTACTTTTATAGTCTT
AGTTAAGATTTGTCGTTCAAAACTACGCTCCAGTCAAAGTTTTTTTTAAT
TCTGATTTAAGATATATTCGGTGACTTCTTCAAGCTTAGTGATTTTCAAA
TAATCCACTGACAACCTTTATCTGTAAACATTGCAATAGGCTCTCTGAAC
TGCAATTGAAGTTAATATTGTGCTTCCATGTCTATAACTCATTTTCTATA
TTACAGCTGCTGAAAATTCAAGCCGTCTTCAACCTTTACCGGTCGACGAA
CCAAATCTTGCTCAACCATTCAAAGATAGAGTTCAATACACGTACGATTA
TGAAAGTATCATCCGTCTCCCCAACCCCGTCATCCCTGAACAAACTGTCG
CCCTCAAATTCACCTGCAAAGTCAATGTTCGATTCGAAACGAAAAGACAA
TTGGCCATCATTGGCAAACTTGCAAGAATGACAGTAAGTCAGAAATAATT
CACCCTCTACTAAATTCACAAATTAAAAATTTTGAGAAATTAAACCGAGC
ATAAATCTGAATAACTATAATATTTATTACGTCACGTTTGCACAACTTAA
ATGCATTAGTCCTTATAACTATACAGAAATGTGAGCACAGATTAAATGAG
GTATATTTTTCGTTTCTTAGCTCAAAGAGCCAACTTTCACAGTTGTTGAA
CAAAACCCAACCGAAATTCCATTGACCGTCGAACAAGTTCTCAATCTTGG
TGAACAAACCCTCAAACAATTCACCACTAACGTTGAACGTGGCCTCGTTT
TCATGCAAAAAGACGGCAAAATTGTCCGTCTTCGATTGAACGTTCGTGAA
CCATTATTTGTGCAAAACTTGAAACGTGGTATTGTCCAATTGTTTTTCGT
GGATTTCCTCGGAACCAACAAGATCACAGGTGACAACACCATCTTCACCA
AAACTGAAGTAAGTACTTGAAAAACTGAAATGTTTTTCCGTAAAATAATA
ACAAGAGACAGGCAAATGTTTTCCATGGTCCTCATCAAAACTTCACGGCT
ATATTTGAAAGACTAGATTGACTTACCAGGCCATCCCGTAATTATTAGTT
ACCGGTTTGAAAAGAGCGCTTTGTTTAGTAAAATTTAATCCTCAAGAATG
CTCAGTGAGACTTTCGCAATATTTTAAAAAAAGAACCAATGTATGATAAC
GTTTACTAAATCTTATGGATTTAAATCCCCTACTTCTTTAGCACACCATC
TTTGGTCACGCCGACTGTTTGTACACCATGACAGGAAACGAAAAAAAACC
AGAGCTGATGGAGATCACCAAGACCATCGATGTCGAACAAACCAGAACCC
CGTTGAACCTCACCCTCACCAACATCCTCCGAAAAGAGGTAACGTCGAAC
CAAAGAAAATTGGAAATTTTGACCAAATTATATTGAGGAGTATCTTATTT
CATACTTATATGTTTGAAAATGTCAGTCAATTCCCTTCTCTTTTCTCAAA
TTCAAGGCTTCGCGAAATTACAGAAACATGATTTTTGAAAAGCTCACAGA
ATCTCTGCTGCAATTTATCTTTTGTTCTTTTCACTTCACAGGGAACATGG
AAAAGCGAGACACCCGTCAAAACCATGGTCAACCAAAACATCCGCATCTT
AAAAACCGCTTCCAACTGGAAACTTATTTCAGTTCATGCTGAAGGTGTGA
CCTCTATCCATTTGACCGGAGAATTGACCAAACCTATGATGACCATCACT
GAACAACGTTTGACACTCGTTAAAGAAACCGTTATGAAGACATCTGTTAT
CATCCCAAAAAACATGAGAGGTGAGTTCCCTTGGACTTAAATTTGATACC
AAATCTCTACAATCAAGGCACACCATCATACCAAAAAATACTAATCACGC
TGAAAATAATCATAGATCACACCATTACGATCACCACTGAGGGGGAAGTT
ATAAAGTGAATGAGTGCTAGAGTCATTAATTTCCTTGCTAAATATACTAC
ACTGAAGAAACAGACCATGCATTCAAAACATTGCATTTTTTACGAACTTT
CTTTTCTTTGGTTCTTTTCAGCTGCCAAACTTTCCATGAGATTACCATCT
GCTTTTGGATTGCCAAAACTACTCAGCAACCCAGCTCTTGCTGAATTCAT
CTTGGAACGAGTTGAAGAAATCGAAAGATTAATGATCAACGAAACAATCG
CACGAGAAGTCATCACTGAGAAAATGGTCGAAGTTGTCCGCATGTTGAGA
CCATTGCCTTTAAAACGATTAAGAATTGTCTGGAATAAATGCATGACCAA
CCAAAAACCAGAATTGATGTGAGTTAATTGATGGTTTTGCAATTTTTGAT
TCCTTTCCATTTCTTGTTTGAAAGTACCTTTTGATTAAGTCTTGTGATAA
TGTCCTCTGATTCGAATTCTTACAGTAACCAGTTCATCTTTTAGTGATCT
AAACCCCAGAGTTAATTTTTCCAATCAAGGCATGTCTCGCGTTTACAACT
TTTATTGTTTTTTATTTCAGGAAACTCTGCTTCCGATTATTGGCCATGGT
TCGTACAGATCCTTCAGTCATTCTCATCAAAGTCAATTTACCAAAATTGC
CAAAAGTTTTATTGGAAGAAACAACATTACTCAAAGAAGTCCTTCTTCTT
CACACCAAACCAATCAAAACCACCAACAGCATG Coding sequence (CDS) from alignment at sc0000015_pilon:408818..411800- >XLOC_043528 ID=XLOC_043528|Name=XLOC_043528|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2934bp|location=Sequence derived from alignment at sc0000015_pilon:408818..411800- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAACGACTAAAGTCCATCACAGGAGATTTTCAAACCTCGGGTACCA
CCAAAGAAGAGAAATCGACGACAAATAATCCTCGACAAATAAGATGGTAA
CGACTAAAGTCCATCACAGGAGATTTTCAAACCTCGGGTACCACCAAAGA
AGAGAAATCGACGACAAATAATCCTCGACAAATAAGCATCAGATGAATAC
ACCAGCCTACTTCGGAAAGATGAAGTTTGGGGTGTTATTACTCCTTGTTG
CCTGTGTTGCATCAGATGAATACACCAGCCTACTTCGGAAAGATGAAGTT
TGGGGTGTTATTACTCCTTGTTGCCTGTGTTGCTGCTGAAAATTCAAGCC
GTCTTCAACCTTTACCGGTCGACGAACCAAATCTTGCTCAACCATTCAAA
GATAGAGTTCAATACACGTACGATTATGAAAGTATCATCCGTCTCCCCAA
CCCCGTCATCCCTGAACAAACTGTCGCCCTCAAATTCACCTGCAAAGTCA
ATGTTCGATTCGAAACGAAAAGACAATTGGCCATCATTGGCAAACTTGCA
AGAATGACACTGCTGAAAATTCAAGCCGTCTTCAACCTTTACCGGTCGAC
GAACCAAATCTTGCTCAACCATTCAAAGATAGAGTTCAATACACGTACGA
TTATGAAAGTATCATCCGTCTCCCCAACCCCGTCATCCCTGAACAAACTG
TCGCCCTCAAATTCACCTGCAAAGTCAATGTTCGATTCGAAACGAAAAGA
CAATTGGCCATCATTGGCAAACTTGCAAGAATGACACTCAAAGAGCCAAC
TTTCACAGTTGTTGAACAAAACCCAACCGAAATTCCATTGACCGTCGAAC
AAGTTCTCAATCTTGGTGAACAAACCCTCAAACAATTCACCACTAACGTT
GAACGTGGCCTCGTTTTCATGCAAAAAGACGGCAAAATTGTCCGTCTTCG
ATTGAACGTTCGTGAACCATTATTTGTGCAAAACTTGAAACGTGGTATTG
TCCAATTGTTTTTCGTGGATTTCCTCGGAACCAACAAGATCACAGGTGAC
AACACCATCTTCACCAAAACTGAACTCAAAGAGCCAACTTTCACAGTTGT
TGAACAAAACCCAACCGAAATTCCATTGACCGTCGAACAAGTTCTCAATC
TTGGTGAACAAACCCTCAAACAATTCACCACTAACGTTGAACGTGGCCTC
GTTTTCATGCAAAAAGACGGCAAAATTGTCCGTCTTCGATTGAACGTTCG
TGAACCATTATTTGTGCAAAACTTGAAACGTGGTATTGTCCAATTGTTTT
TCGTGGATTTCCTCGGAACCAACAAGATCACAGGTGACAACACCATCTTC
ACCAAAACTGAACACACCATCTTTGGTCACGCCGACTGTTTGTACACCAT
GACAGGAAACGAAAAAAAACCAGAGCTGATGGAGATCACCAAGACCATCG
ATGTCGAACAAACCAGAACCCCGTTGAACCTCACCCTCACCAACATCCTC
CGAAAAGAGCACACCATCTTTGGTCACGCCGACTGTTTGTACACCATGAC
AGGAAACGAAAAAAAACCAGAGCTGATGGAGATCACCAAGACCATCGATG
TCGAACAAACCAGAACCCCGTTGAACCTCACCCTCACCAACATCCTCCGA
AAAGAGGGAACATGGAAAAGCGAGACACCCGTCAAAACCATGGTCAACCA
AAACATCCGCATCTTAAAAACCGCTTCCAACTGGAAACTTATTTCAGTTC
ATGCTGAAGGTGTGACCTCTATCCATTTGACCGGAGAATTGACCAAACCT
ATGATGACCATCACTGAACAACGTTTGACACTCGTTAAAGAAACCGTTAT
GAAGACATCTGTTATCATCCCAAAAAACATGAGAGGGAACATGGAAAAGC
GAGACACCCGTCAAAACCATGGTCAACCAAAACATCCGCATCTTAAAAAC
CGCTTCCAACTGGAAACTTATTTCAGTTCATGCTGAAGGTGTGACCTCTA
TCCATTTGACCGGAGAATTGACCAAACCTATGATGACCATCACTGAACAA
CGTTTGACACTCGTTAAAGAAACCGTTATGAAGACATCTGTTATCATCCC
AAAAAACATGAGAGCTGCCAAACTTTCCATGAGATTACCATCTGCTTTTG
GATTGCCAAAACTACTCAGCAACCCAGCTCTTGCTGAATTCATCTTGGAA
CGAGTTGAAGAAATCGAAAGATTAATGATCAACGAAACAATCGCACGAGA
AGTCATCACTGAGAAAATGGTCGAAGTTGTCCGCATGTTGAGACCATTGC
CTTTAAAACGATTAAGAATTGTCTGGAATAAATGCATGACCAACCAAAAA
CCAGAATTGATCTGCCAAACTTTCCATGAGATTACCATCTGCTTTTGGAT
TGCCAAAACTACTCAGCAACCCAGCTCTTGCTGAATTCATCTTGGAACGA
GTTGAAGAAATCGAAAGATTAATGATCAACGAAACAATCGCACGAGAAGT
CATCACTGAGAAAATGGTCGAAGTTGTCCGCATGTTGAGACCATTGCCTT
TAAAACGATTAAGAATTGTCTGGAATAAATGCATGACCAACCAAAAACCA
GAATTGATGAAACTCTGCTTCCGATTATTGGCCATGGTTCGTACAGATCC
TTCAGTCATTCTCATCAAAGTCAATTTACCAAAATTGCCAAAAGTTTTAT
TGGAAGAAACAACATTACTCAAAGAAGTCCTTCTTCTTCACACCAAACCA
ATCAAAACCACCAACAGCATGGAAACTCTGCTTCCGATTATTGGCCATGG
TTCGTACAGATCCTTCAGTCATTCTCATCAAAGTCAATTTACCAAAATTG
CCAAAAGTTTTATTGGAAGAAACAACATTACTCAAAGAAGTCCTTCTTCT
TCACACCAAACCAATCAAAACCACCAACAGCATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000015_pilon | genome | sc0000015_pilon:408818..411800 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1306-1467:163 |
| Aaloc | 1060-1302:611 |
| Aaloc | 829-1056:1093 |
| Aaloc | 682-828:1443 |
| Aaloc | 394-681:2014 |
| Aaloc | 169-393:2426 |
| Aaloc | 94-165:2773 |
| Aaloc | 1-93:2984 |
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