XLOC_043523 (mRNA) -

Overview
NameXLOC_043523
Unique NameXLOC_043523
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000015_pilon:501648..502716-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043523 ID=XLOC_043523|Name=XLOC_043523|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1069bp|location=Sequence derived from alignment at sc0000015_pilon:501648..502716- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAATCTCTTTGAAATGTGTGAATCTACCATCAATATCTTTCCGAG TTTGCACCAGGAACCACTCATTAAGAATTTCCTGAATGATATTGAAATGG ATTTGAATTCAAATATTATTCGTGATGAGTTTGGTGACGTCACTGATTGG CCGAGGAAGCAGATTCTTTTTGGCAATGATGAAATGTACCAGGGTTGTTT GGTGGACATCAATGAAAAAATTGACCAAAGCTCCAACATGGTGAACAATT ATATCAAAGTGAGTCTATATCTTAATTTATAACATCAGAACTTAGTGTAT AGTATAATGAAAACACTATTTTTCAATCTATTTGAAATTTTTATAATTTT TGTTAGCTCTTATAACCCACTGAAAATGTATGTAAAAGCTTGACCAAGCT CACTTCAGTTTAATCTGTGGTATAAAGACATAGATTTAAAATTTAAGAAC GTATAACGTTGTTCAAGTTGAATAATTTTAATTTTCTTTTTCAGCAATTT GAGATATTTCATATGATGATTTCAACGGCCAATTTCGAAGAATTGGAAAG GTCTTTGCAAAAAGAGTGGTCTGTCGATCAATTTGATGCCGTTCTTCAAC AATTCACTATACAGGTAAGTTTGCCACACCCTAGTTAGTAGGGAAATTGT TGGTTAATCGGGGGAACAAGATTCACGCAATCAAGAAGGGTACTTTTTCA CGTATGCAACGAAAAAAGCCCATTCACGCATTTACGCAAGCCATCACCAC TAGGGGTTTTATAAAATGTTGACACTACTTGGGGAATCCAAGCTTATTAA AACATACACTGTGAAGGGATTTGAGTGGAATAATAAGGCCCCTAACGTTA CGCTTCTTATCTTCATGTAATGGTTAGATGAGCAAAATCTTTGACTGTCC ATCTTTATAGGTCAATGCAATGGAGAGTATGCCGTTGTCCAATAGACGTG GTTTATTCACAGTTGAAAGTTTTCAATACAAAGAACATTGTTTACCTTAC CCGAAAAGCATTTTGCAGCTGGTCAACAAACATTTGGCGTCTATTGCGAA CGAGAAGAATGAAGCCTTC

Coding sequence (CDS) from alignment at sc0000015_pilon:501648..502716-

>XLOC_043523 ID=XLOC_043523|Name=XLOC_043523|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1074bp|location=Sequence derived from alignment at sc0000015_pilon:501648..502716- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAATCTCTTTGAAATGTGTGAATCTACCATCAATATCTTTCCGAG
TTTGCACCAGGAACCACTCATTAAGAATTTCCTGAATGATATTGAAATGG
ATTTGAATTCAAATATTATTCGTGATGAGTTTGGTGACGTCACTGATTGG
CCGAGGAAGCAGATTCTTTTTGGCAATGATGAAATGTACCAGGGTTGTTT
GGTGGACATCAATGAAAAAATTGACCAAAGCTCCAACATGGTGAACAATT
ATATCAAAATGGAAAATCTCTTTGAAATGTGTGAATCTACCATCAATATC
TTTCCGAGTTTGCACCAGGAACCACTCATTAAGAATTTCCTGAATGATAT
TGAAATGGATTTGAATTCAAATATTATTCGTGATGAGTTTGGTGACGTCA
CTGATTGGCCGAGGAAGCAGATTCTTTTTGGCAATGATGAAATGTACCAG
GGTTGTTTGGTGGACATCAATGAAAAAATTGACCAAAGCTCCAACATGGT
GAACAATTATATCAAACAATTTGAGATATTTCATATGATGATTTCAACGG
CCAATTTCGAAGAATTGGAAAGGTCTTTGCAAAAAGAGTGGTCTGTCGAT
CAATTTGATGCCGTTCTTCAACAATTCACTATACAGCAATTTGAGATATT
TCATATGATGATTTCAACGGCCAATTTCGAAGAATTGGAAAGGTCTTTGC
AAAAAGAGTGGTCTGTCGATCAATTTGATGCCGTTCTTCAACAATTCACT
ATACAGGTCAATGCAATGGAGAGTATGCCGTTGTCCAATAGACGTGGTTT
ATTCACAGTTGAAAGTTTTCAATACAAAGAACATTGTTTACCTTACCCGA
AAAGCATTTTGCAGCTGGTCAACAAACATTTGGCGTCTATTGCGAACGAG
AAGAATGAAGCCTTCGTCAATGCAATGGAGAGTATGCCGTTGTCCAATAG
ACGTGGTTTATTCACAGTTGAAAGTTTTCAATACAAAGAACATTGTTTAC
CTTACCCGAAAAGCATTTTGCAGCTGGTCAACAAACATTTGGCGTCTATT
GCGAACGAGAAGAATGAAGCCTTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043523XLOC_043523-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000015_pilongenomesc0000015_pilon:501648..502716 -
Properties
Property NameValue
Aaloc379-537:160
Aaloc259-378:576
Aaloc1-258:1070