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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000015_pilon:504436..507823- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043522 ID=XLOC_043522|Name=XLOC_043522|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3388bp|location=Sequence derived from alignment at sc0000015_pilon:504436..507823- (Clytia hemisphaerica_ch_hm2_pilon)
AGAAACTTAGGAAATTATGTACAGAGAAATGAAAAAATAAAGATGGAGGA
TGATGAAGACTTTATTGCTCCACAAAATTCAACAGTTGAAGGTTTTAGGA
TTCCACGCCAATCAATAGATCCACTACGGATACGCAATAGTGCACCACCA
ACTGTTACCACAACACCTCATAACTCTTTTTTACATTTGGAGAAGAAGAA
AGATGAGGAAGAAAAGACACCAGATAGTCCATTTATATCGCCTCGAGAGG
TTAAAGATGGAATTAGTTTCCATAACAGTCTTCAAGATCGGTTATACCAA
TATCCAAGCCGAAAGGTGATTCTTGATGCTCAAGATTGTTTTTTTGCTAC
TTTTTCACTCATTCTCAATTTCCTTTTAAGCAAGAATCTGTGTTTGTCAT
TAAAAAGTTTGAAACAGCCTATGTAGACTTTTAAAACTCCTTATATACTT
CCATATTCTAAAACTGAAAATTTTCACTTTTGTTACAGTTGGGTCTTCAA
ACAAATAGATCAATACTAAAATTGGGTCAGTGCTAGTATGATAACACAGG
CTCAATTTTAAGACAACGTTTAAATTTGTTCATTTTTCAGGCTACTCCAA
TTGGCTTCAAGAAAATCAATACATTTATTTCTAAGAGAAATATTAACACA
CCAGCTCAAAACCAGTTAGTACCTGTAAGTACCAGTTCAATGTATTGTTA
TACTTTTTTGTATTTATAGTCTACTTACTATAGTGATCTAACTTAATCGA
TTGCATTAAATCAATGTATTTTAAGTTTAGGCTGGGAGGATAAAGAAAAA
GCAACAAAACAACCCAATCGTTTCACTTTTTTAAATAAAATTTTGGTTAA
GTGGAAGATGATGATGATGAAGATGATACCACTATATAATAATGCTCACA
AAAGTTTGACCAGGTTGTCATTGAACTGGCATTTAAAAATTGAATTTTGA
TCTTGATATATTTTAATAATTTTTAGAATCCCTCTAATCGGACTGTCAAG
AAAGAAGTTTCTGTAGAGAATGTAGAAAATTACAAGAAACCGTCAAAAAA
TGTTAAGCAAGATGAAAGCCACAATCACTTAGCTGTTATGACTGATGAAG
ATTATGAATATGATTCACCAATGTTTCCTATCATTTATAAACTATTCAAA
AGGCTTGGTTGGCCTTGTGATGGCATCCTGGAAGGGAAGGTTCCAAAACC
AAACGATAAATCGATAGATACACAAATCAGGCATCTTGAAGATGATGGGA
AGTTTGTGTATTGTGTAATGAGACATCCTGACCTACTGAATCCTTTACAT
GACCCCTATGATATCATACCGGCAACTGCTAAGGATATTATTGGCAGTGA
TTGCTACTTTACTATCTCTGCATCGCACTTTAGTAAGGTAATTATGGTTT
TTATATATAAATCAAATGCTAGTTTGATTTGATGATGTAAGGTAAGTGCC
AATGGAAGAAGCTATTTGCTACAATCTCGTTTTGAATATTTTGAGAAAGA
CCTACATAGTTACTATTCCTCACCTCAAAAATCTGTCCAGAGACAAATGG
ACATCTTGGTGGTTTGAAAGCAATCTTTTTTTTAGTTTTTTGTTGTTGAA
AAGAAGACCTTCCAGTGCTTCAATACTTCATTGAAATGTTTATAAGTATA
TTTGAACTTATTCAGGTATCCAGCAAAGAAGGAACAAGAGTGACACCTAT
CTTGGAGTGGATGGCCACACGGACACTTTATTACAAAATCAACAGAATCC
CTGTTTTCAAACAATTCAGGTTCATCAAATAATTTTTTTAATTTTTATAA
CAGTTATGTTTGGGATTGGGATTCAAAATTTGCACACGTTTGTGTTGTTA
GTAGTTACTATAAAAGTTTACTTTACGCTGCTATGATAATTTGTTTTGAC
TTAAAAACTCATTTCTTATCTATAGATTGTGGAAAGCTTTCAGACTGTGG
AGGATGATATTGAAAATTGATAAAAACTTAAATAATGGGTAAAATTTTTG
TTTGCTCCAATTGTCAGTGTAGCAAGTAGTATCCCTTTTTTATTTGCGGA
AGACCTGGAAGGTTGCTTCTTCCAAATTCTAGTTACTTACCTCATATATA
TCAGATTACCCAATCTGAACCAACTCGTTCTTACCTCGTATAGATCAGAT
TACCCAATCTGAGCCAACTCGTTTGCTGTTTTAGCAGTGACTGCTCTACC
AACTAGGCTACCCCGTTAGATTCAAAAACAATTTGATGATAATAATTTTG
CTAAAAGTAAAAAAATATTGAATAGAAGCAAACTGTAACACTGTTGTGTT
GAAATATATAAAAATTGTTTGTTTTTAATTTTTAATTTGTTGTTTTTCAT
TTTTTTAGTGGACAGGTTAAAGACCAGTTGATAATATCACAGCAACCGTT
CATTGGTGCACTAGTGGACATCCAGACGCAATGTCAATTTTTATGTCAAG
ACAAAGACAATGGGATACTGGATATCAATTTGTCACGTGTTTATAACCTA
GATGAGTTCTGTGAACTCCAACAGCAACAGTGTTTGAAGTGTCATCAAAA
GCTTACAAGCTTTAGATCTTCAATATCTGTCATGTTGCTAGATATTTTAA
AGGTAATACAGACTTTAAACTACGCACCTTTTATTATGACTATTTTCCTG
TGTGCCTGGCTATAGGGCCAAGTTAAAACAAAATCAAGGACAGTCGAAAT
TGAGAAAGAAATTGCTTATAAATTTTCTGTGTTAAAGCTTTAGCACTCAG
CAATGTAAGTGCAGCTAAGATTTACGGGTAAAGAAATCCTACAATTTTGG
TAGTTTTTCCTCTTATTCCAACTTCATCTTTGAAGTTCCTGTAAAAGTTT
TTTTCGCTTGTTTGTATTTCGTGCATTCTTTTTAGTCATGTTACGATGAA
GAGTTGAAGAAAGTCGAACAGCATATCATAGATTTGAAAAATCAACAAAA
AGTCAAGAAAAAACCAAAAATTGAAAATCGAAAAAATAGTTTCAAATACA
TTCAGGGTAGGTTTGTCTTTCTTAGAAGATTCTTGATACCAAATGTAAAT
TACAAGAAACTAAGAAGTTTCCAATGCTAGTGTTCTTATAATGTTCGTTA
AAATGTTACGAGGCACGTAAATTTTTTCTTTTTTCAGAGAAATACAAACT
TAACAGAACCAATGAGAAATCCAATCTGAGAAAACCTCAACCAAAAGAGG
AAGAAGAAGATGAACGTAAAGAAGCAAACTCATTCAAATTCACCAGAAGG
ACACTCCTCAAAATCATTTTCAAGAAATTATACCGTTTCATACGTCTAGT
AGATTTTATAGTAATGGATCACATCAGAAGGATGACTTTGCGAACCATGC
AACATTTGCAGCAATATGTTTTAGCCTCTTTCAACAAG Coding sequence (CDS) from alignment at sc0000015_pilon:504436..507823- >XLOC_043522 ID=XLOC_043522|Name=XLOC_043522|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3186bp|location=Sequence derived from alignment at sc0000015_pilon:504436..507823- (Clytia hemisphaerica_ch_hm2_pilon)
AGAAACTTAGGAAATTATGTACAGAGAAATGAAAAAATAAAGATGGAGGA
TGATGAAGACTTTATTGCTCCACAAAATTCAACAGTTGAAGGTTTTAGGA
TTCCACGCCAATCAATAGATCCACTACGGATACGCAATAGTGCACCACCA
ACTGTTACCACAACACCTCATAACTCTTTTTTACATTTGGAGAAGAAGAA
AGATGAGGAAGAAAAGACACCAGATAGTCCATTTATATCGCCTCGAGAGG
TTAAAGATGGAATTAGTTTCCATAACAGTCTTCAAGATCGGTTATACCAA
TATCCAAGCCGAAAGAGAAACTTAGGAAATTATGTACAGAGAAATGAAAA
AATAAAGATGGAGGATGATGAAGACTTTATTGCTCCACAAAATTCAACAG
TTGAAGGTTTTAGGATTCCACGCCAATCAATAGATCCACTACGGATACGC
AATAGTGCACCACCAACTGTTACCACAACACCTCATAACTCTTTTTTACA
TTTGGAGAAGAAGAAAGATGAGGAAGAAAAGACACCAGATAGTCCATTTA
TATCGCCTCGAGAGGTTAAAGATGGAATTAGTTTCCATAACAGTCTTCAA
GATCGGTTATACCAATATCCAAGCCGAAAGGCTACTCCAATTGGCTTCAA
GAAAATCAATACATTTATTTCTAAGAGAAATATTAACACACCAGCTCAAA
ACCAGTTAGTACCTGCTACTCCAATTGGCTTCAAGAAAATCAATACATTT
ATTTCTAAGAGAAATATTAACACACCAGCTCAAAACCAGTTAGTACCTAA
TCCCTCTAATCGGACTGTCAAGAAAGAAGTTTCTGTAGAGAATGTAGAAA
ATTACAAGAAACCGTCAAAAAATGTTAAGCAAGATGAAAGCCACAATCAC
TTAGCTGTTATGACTGATGAAGATTATGAATATGATTCACCAATGTTTCC
TATCATTTATAAACTATTCAAAAGGCTTGGTTGGCCTTGTGATGGCATCC
TGGAAGGGAAGGTTCCAAAACCAAACGATAAATCGATAGATACACAAATC
AGGCATCTTGAAGATGATGGGAAGTTTGTGTATTGTGTAATGAGACATCC
TGACCTACTGAATCCTTTACATGACCCCTATGATATCATACCGGCAACTG
CTAAGGATATTATTGGCAGTGATTGCTACTTTACTATCTCTGCATCGCAC
TTTAGTAAGAATCCCTCTAATCGGACTGTCAAGAAAGAAGTTTCTGTAGA
GAATGTAGAAAATTACAAGAAACCGTCAAAAAATGTTAAGCAAGATGAAA
GCCACAATCACTTAGCTGTTATGACTGATGAAGATTATGAATATGATTCA
CCAATGTTTCCTATCATTTATAAACTATTCAAAAGGCTTGGTTGGCCTTG
TGATGGCATCCTGGAAGGGAAGGTTCCAAAACCAAACGATAAATCGATAG
ATACACAAATCAGGCATCTTGAAGATGATGGGAAGTTTGTGTATTGTGTA
ATGAGACATCCTGACCTACTGAATCCTTTACATGACCCCTATGATATCAT
ACCGGCAACTGCTAAGGATATTATTGGCAGTGATTGCTACTTTACTATCT
CTGCATCGCACTTTAGTAAGGTATCCAGCAAAGAAGGAACAAGAGTGACA
CCTATCTTGGAGTGGATGGCCACACGGACACTTTATTACAAAATCAACAG
AATCCCTGTTTTCAAACAATTCAGGTATCCAGCAAAGAAGGAACAAGAGT
GACACCTATCTTGGAGTGGATGGCCACACGGACACTTTATTACAAAATCA
ACAGAATCCCTGTTTTCAAACAATTCAGATTGTGGAAAGCTTTCAGACTG
TGGAGGATGATATTGAAAATTGATAAAAACTTAAATAATGGATTGTGGAA
AGCTTTCAGACTGTGGAGGATGATATTGAAAATTGATAAAAACTTAAATA
ATGGTGGACAGGTTAAAGACCAGTTGATAATATCACAGCAACCGTTCATT
GGTGCACTAGTGGACATCCAGACGCAATGTCAATTTTTATGTCAAGACAA
AGACAATGGGATACTGGATATCAATTTGTCACGTGTTTATAACCTAGATG
AGTTCTGTGAACTCCAACAGCAACAGTGTTTGAAGTGTCATCAAAAGCTT
ACAAGCTTTAGATCTTCAATATCTGTCATGTTGCTAGATATTTTAAAGTG
GACAGGTTAAAGACCAGTTGATAATATCACAGCAACCGTTCATTGGTGCA
CTAGTGGACATCCAGACGCAATGTCAATTTTTATGTCAAGACAAAGACAA
TGGGATACTGGATATCAATTTGTCACGTGTTTATAACCTAGATGAGTTCT
GTGAACTCCAACAGCAACAGTGTTTGAAGTGTCATCAAAAGCTTACAAGC
TTTAGATCTTCAATATCTGTCATGTTGCTAGATATTTTAAAGTCATGTTA
CGATGAAGAGTTGAAGAAAGTCGAACAGCATATCATAGATTTGAAAAATC
AACAAAAAGTCAAGAAAAAACCAAAAATTGAAAATCGAAAAAATAGTTTC
AAATACATTCAGGTCATGTTACGATGAAGAGTTGAAGAAAGTCGAACAGC
ATATCATAGATTTGAAAAATCAACAAAAAGTCAAGAAAAAACCAAAAATT
GAAAATCGAAAAAATAGTTTCAAATACATTCAGGAGAAATACAAACTTAA
CAGAACCAATGAGAAATCCAATCTGAGAAAACCTCAACCAAAAGAGGAAG
AAGAAGATGAACGTAAAGAAGCAAACTCATTCAAATTCACCAGAAGGACA
CTCCTCAAAATCATTTTCAAGAAATTATACCGTTTCATACGTCTAGTAGA
TTTTATAGTAATGGATCACATCAGAAGGATGACTTTGCGAACCATGCAAC
ATTTGCAGCAATATGTTTTAGCCTCTTTCAACAAGAGAAATACAAACTTA
ACAGAACCAATGAGAAATCCAATCTGAGAAAACCTCAACCAAAAGAGGAA
GAAGAAGATGAACGTAAAGAAGCAAACTCATTCAAATTCACCAGAAGGAC
ACTCCTCAAAATCATTTTCAAGAAATTATACCGTTTCATACGTCTAGTAG
ATTTTATAGTAATGGATCACATCAGAAGGATGACTTTGCGAACCATGCAA
CATTTGCAGCAATATGTTTTAGCCTCTTTCAACAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000015_pilon | genome | sc0000015_pilon:504436..507823 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1345-1593:250 |
| Aaloc | 1222-1341:504 |
| Aaloc | 979-1221:1030 |
| Aaloc | 916-975:1463 |
| Aaloc | 811-912:1724 |
| Aaloc | 400-810:2413 |
| Aaloc | 316-399:2799 |
| Aaloc | 1-315:3389 |
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