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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000663_pilon:41308..47149+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043490 ID=XLOC_043490|Name=XLOC_043490|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5842bp|location=Sequence derived from alignment at sc0000663_pilon:41308..47149+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCACGACATGAATTCTTTTACCTCAATCGTTAAAGCAATGAAGAACAA
GGCTTCATTACTGACAATACAGTATGTCCAAGCCACAAAGTATGACCACT
TTTTGTCACGGCTGTTTCTGAAAACCATACACGCATACAACGAATCAGAC
AATCCAGTCAAACTAACAACCTTAATTGTGAGTATATCAGATAAGCTCTG
TCTAGGTAGACTTTTAATAATGGTGTTCTACCTGGCTGCCGAACTATTTA
CAACTCTGCCTTTCAGATTGAAAGAAAGGTCTACATGAAAATTAATTCCC
TTATAAATATGAAATTTAGGAATTACAGAATTAATTTCTGTTGTAGATTG
CTACAGATTTTCAATCAAAGTTTTCGTGGGTAGACACCCAAAAATAATGT
GATTATTATTATTATTCCCGCTAAAATTAGTCTCTTATTAAGGTAGCTAC
AACAGGCTACAAAGTATTGTTTAGTATTCAGCATTTTAATAAATATCAAT
AACCATTTTATACTTTTTCTTTTCTTTCTTCAGCGTCAGGGTAAGCAAAG
TGAAGATACCTGGGCTTATCGAGTTCAATCAGAGTTAAACAGACCTGGAG
TAGTGTTTTTTAAAAGGATTAACGGAAAAATTCAAAAAGTGGAGGAGGAA
CAATCGGGCTATACAGTTACCACTACCAGTTTTTTTTTCAATGATTTATT
TGCCTGCAAAAAATAAATTTAACAGTTGGAAATAGAAAAATCAAAAAGGA
AAGCAGGCCAGGAAATTACCATTCACCTAGATGTCTAGCATCTAATCAAA
ATGGCAACCTCAGAGAGACATTTCAAAAGATTTGGTCCAGGGGGGCTCCT
CAGAGAATTTGGGTGTGTTTTAGGAGCCTATTCTCAAATGATACAGCCTG
TTTATAGGACAAGGTATGATTTTGATTTCTTTGGCTTCATTACTTGATTC
CCTGCATTCCCGGATCTTGGTAACTGTTTTAAATGGGCGAGAAACTGTAT
GATTAAAGAAGGTGTATCGCCTTGATAACAAAACGGTTTTAGCATCTAAG
TAGATTGAAGCTGTATAAAATTGTATGTTTATTTTAGAAATATCATTTCT
CATATTATTGACTTTTTTCTAGTACAAGCTGACATGAATTTCAAGAACAT
GATCAAATTCGTTCAACAAAAGTCAGGAGGGAATTTTCCTGCAGCAATCC
AAATCTTTGGGGCCACTTTCATGGCCCTTCATTTTAAAACTATCATGGAC
GAGTAAGGGTTCGTTCCTGTGCCATTAGTCATCGGAGCTTCTGCTCGGGT
AACTTAATGCATGTCCCAGAATTGCATTAATTTTTCCGCCCCAGTTCCAG
TCCCTAAACCATAACAAACTATACATTTTTGAAAGCGTATTTGGATGTAG
AATACCGTATTCGGTGTAACTTAAATTCTTTCTCAGTATAATCAGAGATA
TCTAAAGAAAACCTGATTATGACGTCATGATTGATGACGTCATAAATACA
AAAAGTCGAATATCTCGAGAAATATAAATCAAAATTTTATGAAATTTGAA
ATTATAAATAATGACGTCATAATCAAGTTTTCTTTAAGAAACTCAAATTC
TGCTGTGAAAGAATTTAAGTTACACCGAATACGGTATTCTACATCCAAAT
ACGCTTCCAAAAATGTATAGTTTGTTATGGTTTAAGGACTGGAACTGGGG
CGAATAAATTAATGCATTTTTGGGACAGGCATTAAGTTACCCGAGTGGTA
CAACAAAGTCCACCATGGCCAAATTGGCTCTTGCATCTATTGGTGTTAAA
GGAAATAAATTTGGTAAAATATTGCTTTACTATTATAAAGAGAGATTTAA
ACTAAAGTTGATTCTACATGCTGCAAAAGGTAGTAGGTGCTGCACTTGGA
TAATTATTGTATATTGAATCAGGTTAAATTTGTATTATTCTTTTAAAAAA
ATATTGCATTCTTTCTGGAAATGGAGTAACTAATTTATTTATTATGTGTT
TTTACCAGATCTTTATTTAGACTTTAAACTTCTTTTTGTAGATCCGACTT
ATTCATCACTTGTGAACCTTGTTTTGAAAACCCAAGTACCTTTTCTTTGG
GAGGATGCTGAAGATTTCAATTGCCTTGGTAAATTGGTGATGCTGATATA
TAATGATGTAAGTTCAGTAATGATTCGAAAATTATTCTCATTTTGTTTTG
AAAGGTTCCTGAGAGATTTAATACTGAGGCGAAATAATTTTTATTTCTAG
TTCTTCAGGCTATTTTTCTTTACAAAAATCCACAACTGTTAATTTTTCAC
ATTAGTTATTGTAAGTTTGTGTAAAAGAGCTGTTAAGATTTATTCCTCAG
CATTGATAAAATGTGAAATTTTGAATTCAAAGCACTATAAATTATCAAAC
TTCATCATAGGACCTGAAATTTTAGGTAGAACCTTGAACTTCCCCCTGCA
CACTATGACGGTGTATTGCTTATTTATCCATTTGTTAGGAAATGGAAAGC
AAAATAAAAATTAGTGCACACTTATCTTGAATAGACTTTAACAAGCAATA
ACGTTTTGATACTTTTTGCTCTACCCATGAGTCACTATTTTGAGAATAAC
TGATCTATCAATTGACAGCTCTCTTAAAATATTAAAGTGTATAAAAATGC
TCAAAATCATAAATGGTACATGATGTAAGATATTAGTCGATTAAAAATTA
GAAAGATTAGATTAGAAAGATTTAGTAGAATGACGTGGGTTTTTGTATTT
TCTTTTAGTCTGAACGAGAAAAGTATGAAGGGTCATCTGAAAGTCCACAT
ACGATGCCGGTATGCACTACCAACGGCACTTTCTTTGACAGTCTCCCTGA
AGGAATACGCTACAACATGTAAGTTTGCTATGTTGATGAAAAATATTCAG
TCACTATGTTCGTAACAATATTGGGTTCTTCAAAAGATTTATTAGTTGAC
CACTTCCTCAGGACAATCAAGAGGTCGTGTAGGCGTTTCTTTTTTTTAAT
ATAGACGATTGTAGTATGGTGAATTCTGCCCAGATGAATGTGTCAACGCA
GCAGAAAGCAATAAGAAAAAAATAATGAATCTTTTTATCACTAGATACTT
TTCTTTATTCAGATTCGTCCAACGTACACTTTTGATACCGTTCAATGAAT
ATAAACACCAAAAATTGGGTGTTATTGGAAAGTTGATGTTCTCGCATACG
CTGACTACCGAGATGGGGCCGAAAGCTAGTGCCCTTTTCCCTCAGTTTTT
GGAACTGGAAGAGGTGATAAAACTGAAAAATATCGAAAACGATCCCCTTA
TGAAGGGTTTAGAGAAGACCCTTCTTGGAAAAGAACTGTTCCATGTGTCA
GACTTGAGGTCTGACAAGAACTATGCCTTAATGATGTTCTTCACTGGTAA
GGTAGGTTGTTTTACTTTCAGTCAACAGTTTGAATCTAATTATTTTCTCA
TTTGCAATCTATCCCCTCCCTTGTGATCGATATTCGGTCCTTTGATTTCA
ATTTTGCCAACTTTTATATAGCAAAAAAAGGTTCACTTTACTAAGGTCTA
TTCGCTTTAAGAGCAGATGCACCCAAGAATCAGAAATCTGGAATCATGGG
GGTCTTCACTCATCAGATTTACCTGAAATTTAGTTCACCAATACTAGGGG
TCGGGTGGATCAGGCCTGCAAAATTTAAGCGCTGTAGCTTATACAGTTGG
AAAGATATTAGCATTTGAAAAACGTGTAAAATACAGACCAGAATTTAAAA
CCTTAATATCTCTTTTAACATTAATGATATTGATCGGAAACTTGGCACAA
TGGTTGAAAAAAAATATTCAATTGAAAATTTTTGCACACGATGACTTGCG
GTCTCATTTTCCAAAAAGGGTATTAAAAGTTTCCAAAATGTTATACATTT
TTAAAATCTACAGTCTATCTACTTTCTGAATCAAAAAGAATTTCTGGACA
AATCAACCTATTTAAAATAACAGCCGTTTAAAACACTGCATTTTTTTTTA
CCTTAACAACACCTTAGTTACGGGTTGTTTCAGTTCTCCTTGATGTTTAC
CAAAAACTGAACTAGAGACTTTTGTTTGAGTTTTAGGAATCATTTTAGCA
CAAAAATTGGTGGAGTTTGTAAAATTTGTATGATAGTTTGATAATAAATA
TATAGTGCTTTGAAGTCATCTCGGAAAAAACATGATAAAAGTAATAGTAA
TACACAGATTCAAAGAAAATTTATTTTTAAACAATTCGGTCCACGGGGAA
AAATTGTACTGACTGTAGATTATAAAGTTATGATGTTTTTCTGAGAAAAA
TACATCAGTACATTTATAGCTATCGTGTACTAGTAAGCTTCTTATCCCAC
ATTGTTGGTATAAATATTTGCTGGTAAAATTAATATACCGCAATTGCGGT
GATATCCCAACTGTCACACCTTTTAAGATGGGCTATCTattaataaaagt
aaaaatatcacTTCTCTTAGATTCTACAAAGAGCTGGTCTGAAGGATGAA
TCAATTTTGGGAATGTGTGAATTCTTTCTTGATAAACATCTGCAGCCATT
TTTGCACGCTGGCAAAAAAGAGAAAGTGAAAACGAAGATCAAAGAATCTA
GTGACAAAGAACTCATGGAAAGGCTGTTTCAGATGGTGATCAATGCCTGT
ACTAAAGACGAGGTTaggaaaattaaacaaattgattttttcttaaGGCT
GGCCGTCCACTTTCATGCAAAGAGcgtgaaagattttttaaaactgtttt
tgcctgaagaaaagattatgccataaGAAAGTtttgcgcgaacaaaaaaa
gttgaaggattctaaaaaatttagcggttattttcagtttcaataacatt
ttttaaagtttcgcGGGTAGAAATTTTCACGATATCAAAtagtcgcgaaa
tttcgcgaattcTTCTTTTAGAAGAAATTATTTCTTATTTAGGGTGacat
gtatcaaaagaaatcgcCTTCATGCAATTGCTTATCACTGAGTACCTCAA
ACGTAAACAGAATTACAGGTTCACCTTTCACTGAGGGAGAGCTGAAAAGG
ATTCCGGGCTTGGTGCTCAAATATGAGCTTGGGTGCCAAAAAGCAGAATC
AACAGTGAAGAAACGTTTGTTCACTGGGAGGATTAAGGACGATGGTAATA
AGGAATACATCAATTGCATACATTTAAGGACTGAACTCTTCAGCAACAAT
GCAAACATGAAAGCCAAGTATGGAATTAACAGTGACTCCACCAATAATGA
CGAGGCTACTTGTAAGTAGAATACTCGACctgtttcattatttttgtcAT
GTGATTGTTAGAGCTATTTCCAAATCCAATCCAACCATATGCTATCTGTA
GCATAAcatcttattttttatttctcatcGTATTTCTCTAGTTTAAATTA
AAATACGCTTAAATCAGAATTCTCGCAATTGGCagttaaaatgaaagccg
tgaaaacatgtatttttttctttcttggtgGTATTTATACTCTTTATCAT
TAATCTCAGCCAACCAGATTTCAGAAGAGCAGGAACAAGGAGAAGAAGGT
ACAAAAAAgttctagtttagacggtcgaATTTCTGTCTTGTCACCTCTCA
TTTTGCCATCCACTTCACACAACATCTCTCACAAAATCAAGCGGCAAATA
CACTTTGATCTTAGTAAAATTGAAATGCTGAGAATTTTTATTGAGTATTA
CTGGAAATTTTTAAATGTAACTATGTTTGCATCCAATGAACTACTTATTA
ATTTGCTGTTTTTACCTATCTAAATTCTAGGTGCATTGAAAAGAATAAGC
GAAGAAACTGATGATGGCAATGAAGCAGGAGAAGGTAATTGA Coding sequence (CDS) from alignment at sc0000663_pilon:41308..47149+ >XLOC_043490 ID=XLOC_043490|Name=XLOC_043490|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3438bp|location=Sequence derived from alignment at sc0000663_pilon:41308..47149+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCACGACATGAATTCTTTTACCTCAATCGTTAAAGCAATGAAGAACAA
GGCTTCATTACTGACAATACAGTATGTCCAAGCCACAAAGTATGACCACT
TTTTGTCACGGCTGTTTCTGAAAACCATACACGCATACAACGAATCAGAC
AATCCAGTCAAACTAACAACCTTAATTATGCACGACATGAATTCTTTTAC
CTCAATCGTTAAAGCAATGAAGAACAAGGCTTCATTACTGACAATACAGT
ATGTCCAAGCCACAAAGTATGACCACTTTTTGTCACGGCTGTTTCTGAAA
ACCATACACGCATACAACGAATCAGACAATCCAGTCAAACTAACAACCTT
AATTCGTCAGGGTAAGCAAAGTGAAGATACCTGGGCTTATCGAGTTCAAT
CAGAGTTAAACAGACCTGGAGTAGTGTTTTTTAAAAGGATTAACGGAAAA
ATTCAAAAAGTGGAGGAGGAACAATCGGGCTATACAGTTACCACTACCAG
TTTTTTTTTCAATGATTTATCGTCAGGGTAAGCAAAGTGAAGATACCTGG
GCTTATCGAGTTCAATCAGAGTTAAACAGACCTGGAGTAGTGTTTTTTAA
AAGGATTAACGGAAAAATTCAAAAAGTGGAGGAGGAACAATCGGGCTATA
CAGTTACCACTACCAGTTTTTTTTTCAATGATTTATACTTTTTTCTAGTA
CAAGCTGACATGAATTTCAAGAACATGATCAAATTCGTTCAACAAAAGTC
AGGAGGGAATTTTCCTGCAGCAATCCAAATCTTTGGGGCCACTTTCATGG
CCCTTCATTTTAAAACTATCATGGACGAGTAAGGGTTCGTTCCTGTGCCA
TTAGTCATCGGAGCTTCTGACTTTTTTCTAGTACAAGCTGACATGAATTT
CAAGAACATGATCAAATTCGTTCAACAAAAGTCAGGAGGGAATTTTCCTG
CAGCAATCCAAATCTTTGGGGCCACTTTCATGGCCCTTCATTTTAAAACT
ATCATGGACGAGTAAGGGTTCGTTCCTGTGCCATTAGTCATCGGAGCTTC
TGGTACAACAAAGTCCACCATGGCCAAATTGGCTCTTGCATCTATTGGTG
TTAAAGGAAATAAATTTGGTACAACAAAGTCCACCATGGCCAAATTGGCT
CTTGCATCTATTGGTGTTAAAGGAAATAAATTTGATCCGACTTATTCATC
ACTTGTGAACCTTGTTTTGAAAACCCAAGTACCTTTTCTTTGGGAGGATG
CTGAAGATTTCAATTGCCTTGGTAAATTGGTGATGCTGATATATAATGAT
ATCCGACTTATTCATCACTTGTGAACCTTGTTTTGAAAACCCAAGTACCT
TTTCTTTGGGAGGATGCTGAAGATTTCAATTGCCTTGGTAAATTGGTGAT
GCTGATATATAATGATTCTGAACGAGAAAAGTATGAAGGGTCATCTGAAA
GTCCACATACGATGCCGGTATGCACTACCAACGGCACTTTCTTTGACAGT
CTCCCTGAAGGAATACGCTACAACATTCTGAACGAGAAAAGTATGAAGGG
TCATCTGAAAGTCCACATACGATGCCGGTATGCACTACCAACGGCACTTT
CTTTGACAGTCTCCCTGAAGGAATACGCTACAACATATTCGTCCAACGTA
CACTTTTGATACCGTTCAATGAATATAAACACCAAAAATTGGGTGTTATT
GGAAAGTTGATGTTCTCGCATACGCTGACTACCGAGATGGGGCCGAAAGC
TAGTGCCCTTTTCCCTCAGTTTTTGGAACTGGAAGAGGTGATAAAACTGA
AAAATATCGAAAACGATCCCCTTATGAAGGGTTTAGAGAAGACCCTTCTT
GGAAAAGAACTGTTCCATGTGTCAGACTTGAGGTCTGACAAGAACTATGC
CTTAATGATGTTCTTCACTGGTAAGATTCGTCCAACGTACACTTTTGATA
CCGTTCAATGAATATAAACACCAAAAATTGGGTGTTATTGGAAAGTTGAT
GTTCTCGCATACGCTGACTACCGAGATGGGGCCGAAAGCTAGTGCCCTTT
TCCCTCAGTTTTTGGAACTGGAAGAGGTGATAAAACTGAAAAATATCGAA
AACGATCCCCTTATGAAGGGTTTAGAGAAGACCCTTCTTGGAAAAGAACT
GTTCCATGTGTCAGACTTGAGGTCTGACAAGAACTATGCCTTAATGATGT
TCTTCACTGGTAAGATTCTACAAAGAGCTGGTCTGAAGGATGAATCAATT
TTGGGAATGTGTGAATTCTTTCTTGATAAACATCTGCAGCCATTTTTGCA
CGCTGGCAAAAAAGAGAAAGTGAAAACGAAGATCAAAGAATCTAGTGACA
AAGAACTCATGGAAAGGCTGTTTCAGATGGTGATCAATGCCTGTACTAAA
GACGAGATTCTACAAAGAGCTGGTCTGAAGGATGAATCAATTTTGGGAAT
GTGTGAATTCTTTCTTGATAAACATCTGCAGCCATTTTTGCACGCTGGCA
AAAAAGAGAAAGTGAAAACGAAGATCAAAGAATCTAGTGACAAAGAACTC
ATGGAAAGGCTGTTTCAGATGGTGATCAATGCCTGTACTAAAGACGAGGG
TGacatgtatcaaaagaaatcgcCTTCATGCAATTGCTTATCACTGAGTA
CCTCAAACGTAAACAGAATTACAGGTTCACCTTTCACTGAGGGAGAGCTG
AAAAGGATTCCGGGCTTGGTGCTCAAATATGAGCTTGGGTGCCAAAAAGC
AGAATCAACAGTGAAGAAACGTTTGTTCACTGGGAGGATTAAGGACGATG
GTAATAAGGAATACATCAATTGCATACATTTAAGGACTGAACTCTTCAGC
AACAATGCAAACATGAAAGCCAAGTATGGAATTAACAGTGACTCCACCAA
TAATGACGAGGCTACTTGGTGacatgtatcaaaagaaatcgcCTTCATGC
AATTGCTTATCACTGAGTACCTCAAACGTAAACAGAATTACAGGTTCACC
TTTCACTGAGGGAGAGCTGAAAAGGATTCCGGGCTTGGTGCTCAAATATG
AGCTTGGGTGCCAAAAAGCAGAATCAACAGTGAAGAAACGTTTGTTCACT
GGGAGGATTAAGGACGATGGTAATAAGGAATACATCAATTGCATACATTT
AAGGACTGAACTCTTCAGCAACAATGCAAACATGAAAGCCAAGTATGGAA
TTAACAGTGACTCCACCAATAATGACGAGGCTACTTCCAACCAGATTTCA
GAAGAGCAGGAACAAGGAGAAGAAGCCAACCAGATTTCAGAAGAGCAGGA
ACAAGGAGAAGAAGGTGCATTGAAAAGAATAAGCGAAGAAACTGATGATG
GCAATGAAGCAGGAGAAGGTAATTGAGTGCATTGAAAAGAATAAGCGAAG
AAACTGATGATGGCAATGAAGCAGGAGAAGGTAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000663_pilon | genome | sc0000663_pilon:41308..47149 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1660-1719:5783 |
| Aaloc | 1621-1656:5512 |
| Aaloc | 1300-1617:4943 |
| Aaloc | 1108-1299:4471 |
| Aaloc | 820-1107:3114 |
| Aaloc | 709-816:2759 |
| Aaloc | 595-708:2044 |
| Aaloc | 529-591:1750 |
| Aaloc | 346-525:1113 |
| Aaloc | 178-342:534 |
| Aaloc | 1-177:1 |
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