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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000419_pilon:205965..208190- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043489 ID=XLOC_043489|Name=XLOC_043489|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2226bp|location=Sequence derived from alignment at sc0000419_pilon:205965..208190- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCGCACAAGACGCCCTGTATCACAAATCATGTTTACTCAAATTGTA
CAAAAGAGCTTCAAGCAAACAATTCGGAGACGAAACGTCAGAGGAGCAAC
GGAGACTGAGTGGTATCGCGTTTGGCGAAGTTGTTGCTTTTATTGAAGAA
ACCATGTTAGAATTGATAGAAACTGCAAATATCCCTACGTTTAAGCTGTC
AGATCTCATCAAGCTGTATACTGCAAACCTTGAGAAACTTGGCGTCACGC
TTGAAACAAGAGAACACAGCACACGATTCAAAAAGAGACTGCTCAATCAA
TTTGAGGATCTAACTGCTTACAATGACGGAAAAGAAGTCATTCTAGTATT
CAATAAAAATGTTGGAGAGGCATTATCGGTAGCTGCAGAAACCAATTACG
ATGAAGACGGGTATATCCTTGCAAAGGCGGCAAATATCATGCGCAGGTTA
ATCTGGTTTCAAGCTATTAAATTCTTTCTTATATTAAACTTTCTATGTCA
ATGGGCTCCATCTTTACCTTGTTTATTTGATTGAAAAAATGACCACTAAC
AACTTTCCATTCTAAATTTTGCTACTCGTTTTCCTTCACAGGGACATATT
GAACTCGGAGCATTTTCAATTTCACGGGGACTTCAAACCAGGATGCCAAG
AATCTTCAATACCACCAGCTTTAAAATCCTTCATGTCATATTTAATACAC
AGTTCAACTGAGACACCAGGAAACAATGAGCATTACAAACAAGCTGTACT
AACCCTCTGTCAATTAGTAACTTTTAACACTTTGATCCGCACTCGTAAGG
AGTCGACATCCTCGTATCATTCAGTCAACAGAGAACCAGCATTGTGCGTG
TTTCTGGCAATGATGATTCACAATAAAACCAGAAATTTGGACATGGTGGA
GACCGTATCAAAGCTTGGTTTATGCATTAGCAAGCACCGGTTATCAAACC
TCTCTATTGCAATGGGAAACAAAGTAATAGAACTGAATGAATTTGACAGG
GTTGTATTGCCTACCAGCTTAATGCTTGGTATTTTTTCAACGGCATCCAT
TGACAATCTAGATATTGCAATTAAATCAGCATTAGCTACAACATCTTTCC
ATGGGACTGCGGCTTCTATCAATCAACATCCTAAAGCCATTGGTCAAGGT
TTTCCGAGGAAAGCTCCTAGAGTTGAAAAAATTCAGTCCGAGTCACTGAA
GAATCTCCCAACATCATATACTGACGTACCTCCTTTTGATTTGCCAAGTG
AAGTTAAACCTCCTGCATTTAAAAAGTCTAATGTTCCAAAACAAGACTCG
GTGGCTGATCAAACGAAAGACAAGAAATGGTTAGAGAATCCAGAACAGTT
ATCATGGGCAGTCTATCATTCAAAAGAACGAAACCCAGCAACCTGTAAAG
ATATCTCAGCAATGTTGCCAATTTTTCGTGATGATTCAAAGTCGCCAGCT
ACAATCAAACATCTACTCAATGTTCTCATTCATTCTATCAGCTTCTTAAA
TCCAGGTCAACCTGCTGTAATTGGGCTCGACCAACCGCTATTTGCACTTG
CTAAAAGGATTCAATGGTATCAGCCATCATTATATGGTGAAAAGAAGCTG
GTGTTGATGCTCGGAGCACTTCACATTGAAATGGTCATGTTGAGTTGTTT
GGGTGATTGGCTTGAGGATAGTGGCTGGACTATTGTCGTCTCCAACAGTG
GTATCTCGTCATCTGGAAATGACTCCTTATTAACTGGCCACGATGTTGCC
CAAACAAAATATGTGCATCAAGTAACTGCTATGGCCTTGCATCGCCTAAT
GAAATCAGCATATGACAACAGGACACCAAAAATGCGAACACTTTTGAAAT
TTGGAGAGCCGAGATGGAAAAAGAGAACCCACAGTTCAAATTTTGGTCAA
TTGCTTTGAAGATGGAAATGGATTATCTTACGTTTCTACGCTCCATTCGG
TCTGCTGATTTCAAACTCTACGTCGCATCATTAAAAAAGTTTTTGCCATG
GATCTTCCTCTTCGACCATGTCCATTATGCTCGTTGGCTAACCATTCATC
ATCACGACATGGAAGTTTTGAAAGACACAAATCCTCAAGTATACGAAGAG
TTTGTGACAAACGGAAACTTCGTTGTGAACAGAACTCAAAACCGCTTCTC
TAGCATGGGTCTGGATCAACGCCATGAACAACTGAACAAAGATGTCAAAG
GTTTGTATAAAGTATCAAAATTTTAA Coding sequence (CDS) from alignment at sc0000419_pilon:205965..208190- >XLOC_043489 ID=XLOC_043489|Name=XLOC_043489|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4162bp|location=Sequence derived from alignment at sc0000419_pilon:205965..208190- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCGCACAAGACGCCCTGTATCACAAATCATGTTTACTCAAATTGTA
CAAAAGAGCTTCAAGCAAACAATTCGGAGACGAAACGTCAGAGGAGCAAC
GGAGACTGAGTGGTATCGCGTTTGGCGAAGTTGTTGCTTTTATTGAAGAA
ACCATGTTAGAATTGATAGAAACTGCAAATATCCCTACGTTTAAGCTGTC
AGATCTCATCAAGCTGTATACTGCAAACCTTGAGAAACTTGGCGTCACGC
TTGAAACAAGAGAACACAGCACACGATTCAAAAAGAGACTGCTCAATCAA
TTTGAGGATCTAACTGCTTACAATGACGGAAAAGAAGTCATTCTAGTATT
CAATAAAAATGTTGGAGAGGCATTATCGGTAGCTGCAGAAACCAATTACG
ATGAAGACGGGTATATCCTTGCAAAGGCGGCAAATATCATGCGCAGATGA
TCGCACAAGACGCCCTGTATCACAAATCATGTTTACTCAAATTGTACAAA
AGAGCTTCAAGCAAACAATTCGGAGACGAAACGTCAGAGGAGCAACGGAG
ACTGAGTGGTATCGCGTTTGGCGAAGTTGTTGCTTTTATTGAAGAAACCA
TGTTAGAATTGATAGAAACTGCAAATATCCCTACGTTTAAGCTGTCAGAT
CTCATCAAGCTGTATACTGCAAACCTTGAGAAACTTGGCGTCACGCTTGA
AACAAGAGAACACAGCACACGATTCAAAAAGAGACTGCTCAATCAATTTG
AGGATCTAACTGCTTACAATGACGGAAAAGAAGTCATTCTAGTATTCAAT
AAAAATGTTGGAGAGGCATTATCGGTAGCTGCAGAAACCAATTACGATGA
AGACGGGTATATCCTTGCAAAGGCGGCAAATATCATGCGCAGGGACATAT
TGAACTCGGAGCATTTTCAATTTCACGGGGACTTCAAACCAGGATGCCAA
GAATCTTCAATACCACCAGCTTTAAAATCCTTCATGTCATATTTAATACA
CAGTTCAACTGAGACACCAGGAAACAATGAGCATTACAAACAAGCTGTAC
TAACCCTCTGTCAATTAGTAACTTTTAACACTTTGATCCGCACTCGTAAG
GAGTCGACATCCTCGTATCATTCAGTCAACAGAGAACCAGCATTGTGCGT
GTTTCTGGCAATGATGATTCACAATAAAACCAGAAATTTGGACATGGTGG
AGACCGTATCAAAGCTTGGTTTATGCATTAGCAAGCACCGGTTATCAAAC
CTCTCTATTGCAATGGGAAACAAAGTAATAGAACTGAATGAATTTGACAG
GGTTGTATTGCCTACCAGCTTAATGCTTGGTATTTTTTCAACGGCATCCA
TTGACAATCTAGATATTGCAATTAAATCAGCATTAGCTACAACATCTTTC
CATGGGACTGCGGCTTCTATCAATCAACATCCTAAAGCCATTGGTCAAGG
TTTTCCGAGGAAAGCTCCTAGAGTTGAAAAAATTCAGTCCGAGTCACTGA
AGAATCTCCCAACATCATATACTGACGTACCTCCTTTTGATTTGCCAAGT
GAAGTTAAACCTCCTGCATTTAAAAAGTCTAATGTTCCAAAACAAGACTC
GGTGGCTGATCAAACGAAAGACAAGAAATGGTTAGAGAATCCAGAACAGT
TATCATGGGCAGTCTATCATTCAAAAGAACGAAACCCAGCAACCTGTAAA
GATATCTCAGCAATGTTGCCAATTTTTCGTGATGATTCAAAGTCGCCAGC
TACAATCAAACATCTACTCAATGTTCTCATTCATTCTATCAGCTTCTTAA
ATCCAGGTCAACCTGCTGTAATTGGGCTCGACCAACCGCTATTTGCACTT
GCTAAAAGGATTCAATGGTATCAGCCATCATTATATGGTGAAAAGAAGCT
GGTGTTGATGCTCGGAGCACTTCACATTGAAATGGTCATGTTGAGTTGTT
TGGGTGATTGGCTTGAGGATAGTGGCTGGACTATTGTCGTCTCCAACAGT
GGTATCTCGTCATCTGGAAATGACTCCTTATTAACTGGCCACGATGTTGC
CCAAACAAAATATGTGCATCAAGTAACTGCTATGGCCTTGCATCGCCTAA
TGAAATCAGCATATGACAACAGGACACCAAAAATGCGAACACTTTTGAAA
TTTGGAGAGCCGAGATGGAAAAAGAGAACCCACAGTTCAAATTTTGGTCA
ATTGCTTTGAAGATGGAAATGGATTATCTTACGTTTCTACGCTCCATTCG
GTCTGCTGATTTCAAACTCTACGTCGCATCATTAAAAAAGTTTTTGCCAT
GGATCTTCCTCTTCGACCATGTCCATTATGCTCGTTGGCTAACCATTCAT
CATCACGACATGGAAGTTTTGAAAGACACAAATCCTCAAGTATACGAAGA
GTTTGTGACAAACGGAAACTTCGTTGTGAACAGAACTCAAAACCGCTTCT
CTAGCATGGGTCTGGATCAACGCCATGAACAACTGAACAAAGATGTCAAA
GGTTTGTATAAAGTATCAAAATTTTAAGGACATATTGAACTCGGAGCATT
TTCAATTTCACGGGGACTTCAAACCAGGATGCCAAGAATCTTCAATACCA
CCAGCTTTAAAATCCTTCATGTCATATTTAATACACAGTTCAACTGAGAC
ACCAGGAAACAATGAGCATTACAAACAAGCTGTACTAACCCTCTGTCAAT
TAGTAACTTTTAACACTTTGATCCGCACTCGTAAGGAGTCGACATCCTCG
TATCATTCAGTCAACAGAGAACCAGCATTGTGCGTGTTTCTGGCAATGAT
GATTCACAATAAAACCAGAAATTTGGACATGGTGGAGACCGTATCAAAGC
TTGGTTTATGCATTAGCAAGCACCGGTTATCAAACCTCTCTATTGCAATG
GGAAACAAAGTAATAGAACTGAATGAATTTGACAGGGTTGTATTGCCTAC
CAGCTTAATGCTTGGTATTTTTTCAACGGCATCCATTGACAATCTAGATA
TTGCAATTAAATCAGCATTAGCTACAACATCTTTCCATGGGACTGCGGCT
TCTATCAATCAACATCCTAAAGCCATTGGTCAAGGTTTTCCGAGGAAAGC
TCCTAGAGTTGAAAAAATTCAGTCCGAGTCACTGAAGAATCTCCCAACAT
CATATACTGACGTACCTCCTTTTGATTTGCCAAGTGAAGTTAAACCTCCT
GCATTTAAAAAGTCTAATGTTCCAAAACAAGACTCGGTGGCTGATCAAAC
GAAAGACAAGAAATGGTTAGAGAATCCAGAACAGTTATCATGGGCAGTCT
ATCATTCAAAAGAACGAAACCCAGCAACCTGTAAAGATATCTCAGCAATG
TTGCCAATTTTTCGTGATGATTCAAAGTCGCCAGCTACAATCAAACATCT
ACTCAATGTTCTCATTCATTCTATCAGCTTCTTAAATCCAGGTCAACCTG
CTGTAATTGGGCTCGACCAACCGCTATTTGCACTTGCTAAAAGGATTCAA
TGGTATCAGCCATCATTATATGGTGAAAAGAAGCTGGTGTTGATGCTCGG
AGCACTTCACATTGAAATGGTCATGTTGAGTTGTTTGGGTGATTGGCTTG
AGGATAGTGGCTGGACTATTGTCGTCTCCAACAGTGGTATCTCGTCATCT
GGAAATGACTCCTTATTAACTGGCCACGATGTTGCCCAAACAAAATATGT
GCATCAAGTAACTGCTATGGCCTTGCATCGCCTAATGAAATCAGCATATG
ACAACAGGACACCAAAAATGCGAACACTTTTGAAATTTGGAGAGCCGAGA
TGGAAAAAGAGAACCCACAGTTCAAATTTTGGTCAATTGCTTTGAAGATG
GAAATGGATTATCTTACGTTTCTACGCTCCATTCGGTCTGCTGATTTCAA
ACTCTACGTCGCATCATTAAAAAAGTTTTTGCCATGGATCTTCCTCTTCG
ACCATGTCCATTATGCTCGTTGGCTAACCATTCATCATCACGACATGGAA
GTTTTGAAAGACACAAATCCTCAAGTATACGAAGAGTTTGTGACAAACGG
AAACTTCGTTGTGAACAGAACTCAAAACCGCTTCTCTAGCATGGGTCTGG
ATCAACGCCATGAACAACTGAACAAAGATGTCAAAGGTTTGTATAAAGTA
TCAAAATTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000419_pilon | genome | sc0000419_pilon:205965..208190 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1687-2082:397 |
| Aaloc | 448-1683:1635 |
| Aaloc | 1-444:2227 |
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