|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000311_pilon:224671..229571- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043459 ID=XLOC_043459|Name=XLOC_043459|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4901bp|location=Sequence derived from alignment at sc0000311_pilon:224671..229571- (Clytia hemisphaerica_ch_hm2_pilon)
AAAACATATGGAAAGTATAAAACTTCTAAGAACCTCAAATCTGATGATTG
GGATGAAATTGTTGGTGTTAAAGCTGATATCAGGTATTTGTTTTTTTGTG
ATTTTTCTCACAGGGTTTGATACCATCCCAGACTATTATTGTCTTTTACA
AACACTTACATGTTCTATTAAATCCTACTTCCTGGTCACCATACTATTTA
TTGTTAGGGCCCCTCAAGTTTACAGTTGTTTGATTATTACTTTAGGCCTC
CAGAAGTGTCAGGGATTTCAATGTTAAGAAACAAGGAAAATAGAGGGCCC
AACACTGATTCACCAACCACTGATGAAACGTTTGATCAGAGTGAACATTT
TAGGGACCAAGGAGATGAAATTGATGAAGTGTTTCGCAAAGTAAAGCCAA
TTCAGATACATAAGATGGCTGGTTTGTTTGAGGGTTTATCAGTCAGCGAT
CATTCAACTCCCATTGTTTTATGCGAAGATACCCCTCCCTCGCCCAATTC
TAAAGGAGACACTCCTCTGAGATCTACATCGCTAAAGTCAAAAGCTGACA
CACCTTTGAAAGCACCTAAGAAGAATGGTGAAAGATTGTCTTCTACTGAC
TATAGTAAGTTTACTGATGTTACTAAAACAATATTTTTGATAAAAATAAA
AAAGTAAGATACAAAAAGTTGATCTATTATATTTGTCTCAATTTGTCCTA
GCACGCCAACTTGCATTCATTGTTTTTTTAGATTTTGCATGTCGGAAGGT
GGTCAACATCAGTTTGGGAGACAATGGAAAGAAGCGATATGAGATTATCA
GTATAAATTCTTCATGTTGCTCTGAAACTTCAAACTTAACGCCTCAAACA
AATGTGTCTTTCAAAGTATGAATTTTGTTTAATAGAAAAATTTCACAATT
AGCTAGGGACTTTGTGTGTGGTACCAATACCACACACTTGTGTAGCAAGG
AATGTTTGCAAATAAACTTTTTCTCAAAAAAGGTTTCTTGGTTTAATTTC
GAAGTAAGATGAGAACGTCTAGATACCAAAATAAATTTCCCTTTTTTTCT
TTTTGAAGGATGCTTTGGCAAAATCTTTTACATTTGATGGTGCCGAAAAA
AAGATTTTGAATTTTTGCGGTCAAAACGATGTAATTCCATTACAGAATGT
TGTCGAGAAAAGGTAGGGTTGCATTTTTCTTCGTTGAAGTGAGAAAAATT
TATTTTCAAAATTTTGGAGAAAAAAAGAATCCCTATTCCAGAAAGAGTAT
TAAGATTTTAAAAAATTATCTCTTATCTTAAAAATCGTTTAAAAACCAAG
GGGTCTCAAAAATTCCGACGGAAATATAAGGGGATACCTAAAAATTTGTC
TAAAAATCTAGCTGGTAAAAGGGTTCACGGGGTTCGACCTTTCAACAATA
ATCTCCGCCAAAATGACACAGGCAAACATTAAGGCTCAAAGCGTAAGCTT
CACACTGTCCAGAAAACTACATTTAGTCGTTAGATATGTTGACATAATGG
CGTCGATGTTTCCGTGGACTTAAAGCCCTATCAGTTTGGTTGAATTTAAC
CCGACATTCATATCAAGTACACAAAACTTAAAATTATGACGTTCATCATA
CCTTTTACTCTACTTACCACTACATACTAACTACCTACTCTACCATTCTG
CCTTCGAAAACAAATCATTTTGAAACGCCATTTTCTCGATAAACATCTAT
TTTTGTACACTGGTTTTAGTACCCCTCTCATCGAAGAAGTTTTCGTATTC
AATAAAGCTCACTCGTTCGTATTCTATTCTTTCAGTATTGAACGTAAAAT
TGGTGAAGGGTCGTATGGAGAGGTTTATTTGAAGAAACAAAATCATTGTC
TAACTGCTTTGAAGGTAACCAAATGTGCCTTCTCAGTTCTTAATCATGTT
TAAAAAAATAAGCTTTTGTAATTGAATTTTGAATATCATTTTTACAAGGT
TAAGGTTTGCATAAAATTGTCTGGTGGTATAAGATAAGGTATTAATAAAT
GAAAGCAGATATTAAATCTACATTGGATTTGCTTGGGTACCTTATAAAAT
TCAGGTGTGTTGGCTTAGGGCATAATGATTTCATAAAGCTATCCTGTATT
AGATCGTCCCGGTTGGTCACAATACAACAGAACAAATGAAGCTGGATGAT
ATACTATCAGAGATTGCCATTTCCAAGTAAAATTCTTTCATATCTTATTC
ACTTATAACCCCTTAATTGCCAATGTCGAGTATATTGGACATGCGCTATA
TAAGAGGGCGAAGCCCTCCTGTAATGCCCAGCTTATTTTAAATCGTCATT
TTTGGTCCAACTCATAGGAATTGCATTGTGCTTCATTGTGCTTCGTCAAG
CAAAAAAAAAATTAAAAGCTATTCTTTCTAGCGAGATTTTAAGCCAAAAA
GTCAAAAAATGCAAAAATTTGACAAAAATCCAATTTTTTGAGATTTTGAC
CGTTTTTGACCATTTTTGGTCAACGAGTGAACCCAGAACCTCCAAATTTG
GCCCCGTTTTACTTTTTTCTGTCTTCTAGCGGATTGATTTGGAAGTTTTA
CCACTGGGCATCTTCCCGTCGTTCAGTCAGGTCCGCAGCTGCTTTAATTC
CGCTAACCTACCCCCTTTTTAGCCGCCACCTACCGCGCGATTTATTTATT
CAAATGAAAGAGGAGACTCTCAGCTATCCAACGAGCTATGAATGAACGAG
CTTCTCACTCCTTCTAGATCCGGAGATTAAGCCTTTGAAGTTTGACATAG
TGATTTTCTTAAAAAACTTCTTAAAAAAGGACTGTGACACTTAAAGGGTT
AGTAAAGGTTCAGTAAACAATAAAAAACAATAAAAATAACGAGCTTCAAA
TTATACCAACACGAAAACCCATAAATTTCCATCTCCTTTTTTCAGAAAGC
TGTCTTGTTGGAAGCAACATAGTCATGTAAGAGAACCACCTTTACCCCAT
GAAAAACTATCTTCATTCATTCACACAAAGCAAAACTGATTTGATAGTTT
TTTCTTCTCTTTTTCTTATCGAGCTCTTTATAGAATTATTTTCACATCGA
TGATAAATATATTTTTTTAATTTTAGGATAAGAAGCTCTATCCTGAAAAT
TGTGTTGAGGGCTTCATTGAATTGAAAAGGTAGATAGACAAAATGTTTGT
CGGACTCTTGCTAAAAAACTTCCATATAATAGTCCCTATACTTTAGTTTG
CTTTTGTTCGAGGGAGTCTCCGATGTAAAAAAAAAACAAACACAGCTCAT
TCTTGAATACTCAATATTATCTTACCTTTGTAGCTTCTTGCTTCTAGTTT
AAGTTATTGTAAAGGCCCATTCACACGACATTTGATTGATCTTTGGGAGG
AATGGGAAGAAGATAAAAAGAATGACTGCCAAAACAACCACCCTGGTAAG
AAACAACCAATAAGAACTTGTGTATTAAGTACTACTACTTTTTGAGTTTA
TAGCTTTGTATGTTTTTTATGCTTTTTAATTTTGAGCTTGCATGGTTAAC
ATTGTAAAACGCATTCATTGTTTTAATCGCTTCAACTTAAGATTTATTGA
TTCTTATCAAAAGAACTCGCATTCTTTGCAATGGATTTAAATCAAACCCC
GTGCATTGTTTTTTATTAAATTATTTTTTTAAAAGCTATACGAAATTTTC
TCTCAAATGTTATTTATTGACGCCTAACCCATTTGTTTTTAGCTTCACAG
AAAACGGCTTCAGAGTCTTGCAAATTGTTAGACGCTTCTAATTAGGCAAT
TCATAGACCTTTCAATACGGCACCCGGCATCTCCCACAACGAAAAGCCAG
TAATTATTATTCTCACTTTCGAAATTCATACTTTGTTCTCTTTTGATTTT
CAGAAGTTTATAGTGAAAATCAAAGGTATGTGGTATTTGAGAACCGATTT
GGGGGACAGGATCTCGAGAAATGCAAAATCACCACCATGAAAGAAGCAAT
GAGCATCTTAAAACAAGTAAATTCTTTCTTCCCTCTATTCATCATGCAAC
CTACTCTTCGTTATTATTATAATAAAAGTTAGATTTGGTTGTCAGAGTTG
AAGTATTTAAATCCTCCCTTTATACTTGTTTTGCAGCTGGTTGCCACCCT
TGCATCTGCAGAACTTTCTATGCAGTTCGAACACCGTGATTTGCACTGGG
GCAACATTTTGATCGAGAAAATGGAAGAGAAGAACAAGAATTTGTACATC
CTGGTGGACGATGAAGAATACGTGATACCTTCTTGTGGTCTTGTTGTCAC
CATCATTGACTTCACGTTGGCTCGTCTTCTCAGTGGTAAGCCTTGTTTGT
AAATGTTAAGTGCTATTAACTTTCTTATACACACTTTGAATTGAATATTA
CTGGATGCATACGAAAGCACGCACTAAAAAAGTTTTGTAGACGGTCATAG
GATGGAAGTATGTACAATATTTCATTATTTCAGAGGATTGTGTGGTGTAT
ACGGATTTGAGTGAAGAAGATGTTTTATTCGAAGGAGAGGGAGATGAACA
ATTCGATGTTTACCGACAGATGAAATCGCATAACCAGTAAGTCCCCCCTT
CTCATACATGGTTTTTTCTTACCAACGAATAATTTATTGAATAAAATGCT
GAGTTTGCAATTATTAAAAACGAATCAAAATATGAATCTTAATCACTTTA
TGTTGTATTAATTATGTGTGTTCTTAGTTGAATACTGTAACTAAGAACGC
CTATAGTTTTCCTTCTTTTTCTTTCACAGTAACGAATGGGAGGCATTCAA
TCCCTTCACCAATGTGTTATGGATTCATTACATCACCAACAAACTAGCTT
CCAAGCTTCGTAAAAATGCCACCATGAAGAAGTTCGCTGCTCGTGTACTA
GACTACAAATCCTGTCACGATATCTTATTGGAGGACGTATTGTTTCGATG
A Coding sequence (CDS) from alignment at sc0000311_pilon:224671..229571- >XLOC_043459 ID=XLOC_043459|Name=XLOC_043459|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3306bp|location=Sequence derived from alignment at sc0000311_pilon:224671..229571- (Clytia hemisphaerica_ch_hm2_pilon)
AAAACATATGGAAAGTATAAAACTTCTAAGAACCTCAAATCTGATGATTG
GGATGAAATTGTTGGTGTTAAAGCTGATATCAGAAAACATATGGAAAGTA
TAAAACTTCTAAGAACCTCAAATCTGATGATTGGGATGAAATTGTTGGTG
TTAAAGCTGATATCAGGCCTCCAGAAGTGTCAGGGATTTCAATGTTAAGA
AACAAGGAAAATAGAGGGCCCAACACTGATTCACCAACCACTGATGAAAC
GTTTGATCAGAGTGAACATTTTAGGGACCAAGGAGATGAAATTGATGAAG
TGTTTCGCAAAGTAAAGCCAATTCAGATACATAAGATGGCTGGTTTGTTT
GAGGGTTTATCAGTCAGCGATCATTCAACTCCCATTGTTTTATGCGAAGA
TACCCCTCCCTCGCCCAATTCTAAAGGAGACACTCCTCTGAGATCTACAT
CGCTAAAGTCAAAAGCTGACACACCTTTGAAAGCACCTAAGAAGAATGGT
GAAAGATTGTCTTCTACTGACTATAGCCTCCAGAAGTGTCAGGGATTTCA
ATGTTAAGAAACAAGGAAAATAGAGGGCCCAACACTGATTCACCAACCAC
TGATGAAACGTTTGATCAGAGTGAACATTTTAGGGACCAAGGAGATGAAA
TTGATGAAGTGTTTCGCAAAGTAAAGCCAATTCAGATACATAAGATGGCT
GGTTTGTTTGAGGGTTTATCAGTCAGCGATCATTCAACTCCCATTGTTTT
ATGCGAAGATACCCCTCCCTCGCCCAATTCTAAAGGAGACACTCCTCTGA
GATCTACATCGCTAAAGTCAAAAGCTGACACACCTTTGAAAGCACCTAAG
AAGAATGGTGAAAGATTGTCTTCTACTGACTATAATTTTGCATGTCGGAA
GGTGGTCAACATCAGTTTGGGAGACAATGGAAAGAAGCGATATGAGATTA
TCAGTATAAATTCTTCATGTTGCTCTGAAACTTCAAACTTAACGCCTCAA
ACAAATGTGTCTTTCAAAATTTTGCATGTCGGAAGGTGGTCAACATCAGT
TTGGGAGACAATGGAAAGAAGCGATATGAGATTATCAGTATAAATTCTTC
ATGTTGCTCTGAAACTTCAAACTTAACGCCTCAAACAAATGTGTCTTTCA
AAGATGCTTTGGCAAAATCTTTTACATTTGATGGTGCCGAAAAAAAGATT
TTGAATTTTTGCGGTCAAAACGATGTAATTCCATTACAGAATGTTGTCGA
GAAAAGGATGCTTTGGCAAAATCTTTTACATTTGATGGTGCCGAAAAAAA
GATTTTGAATTTTTGCGGTCAAAACGATGTAATTCCATTACAGAATGTTG
TCGAGAAAAGTATTGAACGTAAAATTGGTGAAGGGTCGTATGGAGAGGTT
TATTTGAAGAAACAAAATCATTGTCTAACTGCTTTGAAGTATTGAACGTA
AAATTGGTGAAGGGTCGTATGGAGAGGTTTATTTGAAGAAACAAAATCAT
TGTCTAACTGCTTTGAAGATCGTCCCGGTTGGTCACAATACAACAGAACA
AATGAAGCTGGATGATATACTATCAGAGATTGCCATTTCCAAATCGTCCC
GGTTGGTCACAATACAACAGAACAAATGAAGCTGGATGATATACTATCAG
AGATTGCCATTTCCAACGGATTGATTTGGAAGTTTTACCACTGGGCATCT
TCCCGTCGTTCAGTCAGCGGATTGATTTGGAAGTTTTACCACTGGGCATC
TTCCCGTCGTTCAGTCAGAAAGCTGTCTTGTTGGAAGCAACATAGTCATA
AAGCTGTCTTGTTGGAAGCAACATAGTCATGATAAGAAGCTCTATCCTGA
AAATTGTGTTGAGGGCTTCATTGAATTGAAAAGGATAAGAAGCTCTATCC
TGAAAATTGTGTTGAGGGCTTCATTGAATTGAAAAGTTTAAGTTATTGTA
AAGGCCCATTCACACGACATTTGATTGATCTTTGGGAGGAATGGGAAGAA
GATAAAAAGAATGACTGCCAAAACAACCACCCTGTTTAAGTTATTGTAAA
GGCCCATTCACACGACATTTGATTGATCTTTGGGAGGAATGGGAAGAAGA
TAAAAAGAATGACTGCCAAAACAACCACCCTGAAGTTTATAGTGAAAATC
AAAGGTATGTGGTATTTGAGAACCGATTTGGGGGACAGGATCTCGAGAAA
TGCAAAATCACCACCATGAAAGAAGCAATGAGCATCTTAAAACAAAAGTT
TATAGTGAAAATCAAAGGTATGTGGTATTTGAGAACCGATTTGGGGGACA
GGATCTCGAGAAATGCAAAATCACCACCATGAAAGAAGCAATGAGCATCT
TAAAACAACTGGTTGCCACCCTTGCATCTGCAGAACTTTCTATGCAGTTC
GAACACCGTGATTTGCACTGGGGCAACATTTTGATCGAGAAAATGGAAGA
GAAGAACAAGAATTTGTACATCCTGGTGGACGATGAAGAATACGTGATAC
CTTCTTGTGGTCTTGTTGTCACCATCATTGACTTCACGTTGGCTCGTCTT
CTCAGTGCTGGTTGCCACCCTTGCATCTGCAGAACTTTCTATGCAGTTCG
AACACCGTGATTTGCACTGGGGCAACATTTTGATCGAGAAAATGGAAGAG
AAGAACAAGAATTTGTACATCCTGGTGGACGATGAAGAATACGTGATACC
TTCTTGTGGTCTTGTTGTCACCATCATTGACTTCACGTTGGCTCGTCTTC
TCAGTGAGGATTGTGTGGTGTATACGGATTTGAGTGAAGAAGATGTTTTA
TTCGAAGGAGAGGGAGATGAACAATTCGATGTTTACCGACAGATGAAATC
GCATAACCAAGGATTGTGTGGTGTATACGGATTTGAGTGAAGAAGATGTT
TTATTCGAAGGAGAGGGAGATGAACAATTCGATGTTTACCGACAGATGAA
ATCGCATAACCATAACGAATGGGAGGCATTCAATCCCTTCACCAATGTGT
TATGGATTCATTACATCACCAACAAACTAGCTTCCAAGCTTCGTAAAAAT
GCCACCATGAAGAAGTTCGCTGCTCGTGTACTAGACTACAAATCCTGTCA
CGATATCTTATTGGAGGACGTATTGTTTCGATGATAACGAATGGGAGGCA
TTCAATCCCTTCACCAATGTGTTATGGATTCATTACATCACCAACAAACT
AGCTTCCAAGCTTCGTAAAAATGCCACCATGAAGAAGTTCGCTGCTCGTG
TACTAGACTACAAATCCTGTCACGATATCTTATTGGAGGACGTATTGTTT
CGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000311_pilon | genome | sc0000311_pilon:224671..229571 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1483-1653:172 |
| Aaloc | 1381-1479:467 |
| Aaloc | 1180-1377:816 |
| Aaloc | 1069-1179:1047 |
| Aaloc | 970-1065:1604 |
| Aaloc | 916-966:1826 |
| Aaloc | 886-915:2006 |
| Aaloc | 835-882:2372 |
| Aaloc | 760-831:2800 |
| Aaloc | 682-759:3116 |
| Aaloc | 577-678:3844 |
| Aaloc | 445-576:4169 |
| Aaloc | 85-441:4656 |
| Aaloc | 1-81:4902 |
|
