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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000311_pilon:174670..176817- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043457 ID=XLOC_043457|Name=XLOC_043457|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2148bp|location=Sequence derived from alignment at sc0000311_pilon:174670..176817- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTATGGAATCCTTCAACCTTACAGCTCTCTGCAACCTGACACAGGA
AAGGATCAAAGAACTTTATCACATTAGTGAAAATTCTGATAAAGCTGGTG
ACGCAACCTGGATATTAACTTCTGCATTCATCATATTCACCATGCAAAGT
GGGTTTGGATTACTGGAAGCAGGTGAAAACCATCTAGCTTTATTCAATAG
AATATGCACTGTGAATAAGTTTAAAAATGAAAGAAGCTCATCACGACGAG
TGAAAATGTGCATTTAATATTCCAAAAAGTATCAGATTAATTTTAAAAGA
TACCTAAAATATTCTGTTAAAAATTAGTTCCCTCCCTAGTTGGGAACTTA
ATGAAAATTTCACCTTTTTCCATATTTCTAACACTATTCCAGGGAGCGTT
TCATCCAAAAACGAATGTAACATCATGGTAAAGAATGCAGTAGATGTTAT
TTTTGGTGGTCTTGGCTATTGGATTTGTGGATTTGCATTCAGCTTTGGGG
AAGATGAAACATATTCAAATGCTTTCACCGGTTAGTGAAGAATTCTTACT
TTTTGTTATTTTTACCCTTGCACAGTCTGGTCATTACACTTCTTAGTGCA
GTACCCGCTAACCGGTATTTATTCATCAGATTTCATATTTTTCAACAAAA
AGAATCTGTTTACTTTGACAGGTTTTGGCAGCTTCTTCACTGGTTCAAGC
AACGACGACAATTCAGACATCATTCTATCGAAATATTTCTTCCAACTTTC
ATTTGCTACCACTGCAACAACCATTGTGTCAGGAGCGATGGCCGAACGCA
CCAATTTAAAAGCATACATGTTCTTCTCATTCATTAATTTTCTATCTTAC
GTTTTTCCTGCTCATTGGATATGGGCAGAGGGTGGATATTTTAAGATGAA
AGGTGTTGTAGATGTGGCGGGATGTGGTCCAGTACATGTGGTAGGAGGAA
CAGCGGCCATTGTTGCTTCCATCATACTGAAACCAAGGTAACATCCCTTT
GTATGTCTGCTCCTTTCTGTAAATGTATTTTTCGCACCTTAAAACATGGC
GATTTCATGAAGGGGTTTTAAAATTATAACGACTTATCAATTGTAGGACG
GGAGTGTTTGACCATTCCCAAGATGAAAAGAGAGATGAATATTCAACGAT
GGCCTCACCTACAAATGTGGTGTTGGGAACGTTCATGCTTTGGTGGGGAT
GGCTAGGATTCAATTGTGGATCAACCTTCGGAGTTAGCGGAGGTATAAAA
AGGCAAACTATGCGAAGGCCAAAATTGTGGAAGATTTATAAGAATTCTTG
TCAACTTCTTTCAATTTTAGATTGCGGTTTATTACGGATTTAAGATTTCA
ATGTTTAAATCAAAAGCTTTCTTCAAGGCGCTTCCATTATGATCTTAATT
AGTGAATGTTATTTTCTTTTACTCGTAGGGAAATGGAAACTAGCTTCTCG
TGCTGCAGTGACTACTGTTAATGCTTCAGTAGGAGGAGGCATCTGGTCTG
TCTTTTATTGCTATGTGCTCACCAAAGAATACAACCACAAACTAGATATT
GGAATCTTTACCAACTGTATTTTGGGTGGCTTAGTTTCGATCACAGCAAT
TTGTGCTTTGTGCAAGCCCTGGGAGGCATTGCTGGTTGGAATGGCAGGCG
GATTTATTGTTTCGTACGGTGAGTGAGCGCACAACTATCGACGGATAGTA
TCATTTAATTGTAGTATCAAATCAAACTTTTGCGAGAGAATGTTTTGGAA
GGCTCTAATTATATTGCCTTTTGAATGATCTGTCTGTCCATTGCATCATA
ATTTTTTTCTTTATCTTAGGAGTGCTATTGATAGGTAAACTGAAAATTGA
TGATCCAGTATCTTGTATTCCTGTTCATTGTTTCTGCGGCATGTGGGGAA
TGGTGTGTGTCGGGTGAGTGACTGTTCTTCATTTGGCCATGAAACAAATG
TGTTGAAAATATTCAAAATATTCATCATCATTTCATTACAATACTTAAAA
TATCAGCCACCTTTTCAGCTTGTTTGGCGAGAAAGATGAAGTAGAGAACA
TCAATTTGCAATATGGCGTTGCTAAAGGTGGACCTGCTTCATTTCTTGGC
TACCAGATTGCTGCTGCATTGGCTATTGCTGCTTGGTCTGGTGTTTCA Coding sequence (CDS) from alignment at sc0000311_pilon:174670..176817- >XLOC_043457 ID=XLOC_043457|Name=XLOC_043457|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2472bp|location=Sequence derived from alignment at sc0000311_pilon:174670..176817- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTATGGAATCCTTCAACCTTACAGCTCTCTGCAACCTGACACAGGA
AAGGATCAAAGAACTTTATCACATTAGTGAAAATTCTGATAAAGCTGGTG
ACGCAACCTGGATATTAACTTCTGCATTCATCATATTCACCATGCAAAGT
GGGTTTGGATTACTGGAAGCAGATGAGTATGGAATCCTTCAACCTTACAG
CTCTCTGCAACCTGACACAGGAAAGGATCAAAGAACTTTATCACATTAGT
GAAAATTCTGATAAAGCTGGTGACGCAACCTGGATATTAACTTCTGCATT
CATCATATTCACCATGCAAAGTGGGTTTGGATTACTGGAAGCAGGGAGCG
TTTCATCCAAAAACGAATGTAACATCATGGTAAAGAATGCAGTAGATGTT
ATTTTTGGTGGTCTTGGCTATTGGATTTGTGGATTTGCATTCAGCTTTGG
GGAAGATGAAACATATTCAAATGCTTTCACCGGGAGCGTTTCATCCAAAA
ACGAATGTAACATCATGGTAAAGAATGCAGTAGATGTTATTTTTGGTGGT
CTTGGCTATTGGATTTGTGGATTTGCATTCAGCTTTGGGGAAGATGAAAC
ATATTCAAATGCTTTCACCGGTTTTGGCAGCTTCTTCACTGGTTCAAGCA
ACGACGACAATTCAGACATCATTCTATCGAAATATTTCTTCCAACTTTCA
TTTGCTACCACTGCAACAACCATTGTGTCAGGAGCGATGGCCGAACGCAC
CAATTTAAAAGCATACATGTTCTTCTCATTCATTAATTTTCTATCTTACG
TTTTTCCTGCTCATTGGATATGGGCAGAGGGTGGATATTTTAAGATGAAA
GGTGTTGTAGATGTGGCGGGATGTGGTCCAGTACATGTGGTAGGAGGAAC
AGCGGCCATTGTTGCTTCCATCATACTGAAACCAAGGTTTTGGCAGCTTC
TTCACTGGTTCAAGCAACGACGACAATTCAGACATCATTCTATCGAAATA
TTTCTTCCAACTTTCATTTGCTACCACTGCAACAACCATTGTGTCAGGAG
CGATGGCCGAACGCACCAATTTAAAAGCATACATGTTCTTCTCATTCATT
AATTTTCTATCTTACGTTTTTCCTGCTCATTGGATATGGGCAGAGGGTGG
ATATTTTAAGATGAAAGGTGTTGTAGATGTGGCGGGATGTGGTCCAGTAC
ATGTGGTAGGAGGAACAGCGGCCATTGTTGCTTCCATCATACTGAAACCA
AGGACGGGAGTGTTTGACCATTCCCAAGATGAAAAGAGAGATGAATATTC
AACGATGGCCTCACCTACAAATGTGGTGTTGGGAACGTTCATGCTTTGGT
GGGGATGGCTAGGATTCAATTGTGGATCAACCTTCGGAGTTAGCGGAGGA
CGGGAGTGTTTGACCATTCCCAAGATGAAAAGAGAGATGAATATTCAACG
ATGGCCTCACCTACAAATGTGGTGTTGGGAACGTTCATGCTTTGGTGGGG
ATGGCTAGGATTCAATTGTGGATCAACCTTCGGAGTTAGCGGAGGGAAAT
GGAAACTAGCTTCTCGTGCTGCAGTGACTACTGTTAATGCTTCAGTAGGA
GGAGGCATCTGGTCTGTCTTTTATTGCTATGTGCTCACCAAAGAATACAA
CCACAAACTAGATATTGGAATCTTTACCAACTGTATTTTGGGTGGCTTAG
TTTCGATCACAGCAATTTGTGCTTTGTGCAAGCCCTGGGAGGCATTGCTG
GTTGGAATGGCAGGCGGATTTATTGTTTCGTACGGGAAATGGAAACTAGC
TTCTCGTGCTGCAGTGACTACTGTTAATGCTTCAGTAGGAGGAGGCATCT
GGTCTGTCTTTTATTGCTATGTGCTCACCAAAGAATACAACCACAAACTA
GATATTGGAATCTTTACCAACTGTATTTTGGGTGGCTTAGTTTCGATCAC
AGCAATTTGTGCTTTGTGCAAGCCCTGGGAGGCATTGCTGGTTGGAATGG
CAGGCGGATTTATTGTTTCGTACGGAGTGCTATTGATAGGTAAACTGAAA
ATTGATGATCCAGTATCTTGTATTCCTGTTCATTGTTTCTGCGGCATGTG
GGGAATGGTGTGTGTCGGGAGTGCTATTGATAGGTAAACTGAAAATTGAT
GATCCAGTATCTTGTATTCCTGTTCATTGTTTCTGCGGCATGTGGGGAAT
GGTGTGTGTCGGCTTGTTTGGCGAGAAAGATGAAGTAGAGAACATCAATT
TGCAATATGGCGTTGCTAAAGGTGGACCTGCTTCATTTCTTGGCTACCAG
ATTGCTGCTGCATTGGCTATTGCTGCTTGGTCTGGTGTTTCACTTGTTTG
GCGAGAAAGATGAAGTAGAGAACATCAATTTGCAATATGGCGTTGCTAAA
GGTGGACCTGCTTCATTTCTTGGCTACCAGATTGCTGCTGCATTGGCTAT
TGCTGCTTGGTCTGGTGTTTCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000311_pilon | genome | sc0000311_pilon:174670..176817 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1108-1236:130 |
| Aaloc | 1015-1104:328 |
| Aaloc | 775-1011:719 |
| Aaloc | 628-771:1052 |
| Aaloc | 313-624:1476 |
| Aaloc | 175-309:1755 |
| Aaloc | 1-171:2149 |
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