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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000311_pilon:150625..153131+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043455 ID=XLOC_043455|Name=XLOC_043455|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2507bp|location=Sequence derived from alignment at sc0000311_pilon:150625..153131+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATGGTTTCCAGAAGCAGATGAATCAGTATTGACAATCCTGAAAtc
aattttgccaaaaagtACCGTGGaaagaaaccaaaacaaatcaaagaagT
TCCACAAGCATTGACCCGTCGTCAATGCATGTCAAAAGTAGCAGAGGTCT
TCGATATTGCTGGCCTTGTCACCCCAATCACAGCCACACTGAAAGTTGAT
CTACACAAACTTGTCCTGAGGCGAATGGAGTGGGATGACGCACTACCAGA
TAATCTACGAAATGTATGGatatctcattttgaaatgcTTCAAGAAATCA
AgacaatcaaattcaaacgtGCTGCTGTCCCATCTTATGCTTCCAATCTA
GAGATCAACACTCTAGACTTCGGAGATGCCAGTGAAAATCTCATCTGCGC
TGCAATTTATGCAAGATTTAAACTGACAAATGGAAGCTACTCATGTCAAT
TGGTATTTGCCAGAAGTCGCCTTGTGCCAGAAGAAATGACACAGCCTCGT
GCTGAGTTATATGCAGCATTGGTCAATACGCATGCAGGAGAAGTTGTCAG
GAAATCATTTCAACACGCAACATCAGTCAAATTCACTGACTCTCAAATAG
TGCTTTATTGGATCACCAAGCCAACCATTCAACTCAAACAATGGGTGCGA
AATAGAGTCAACGAGATCAAAAGACTGACATCATCATCTCAGTGGGTATA
CGTACAAACAAATGACATGATTGCTGATATTGGTACACGAAGATGCACAT
CAGTCGAAGAAGTGGACCAATCATCTGTCTGGACAACTGGCTATCCATGG
ATGAAGCAATCCTCAACATCCTTCCCTTCAAAGACAATGGAGGAAATAAC
ATTAACCAACAGCCAACTGGCGGAGGTTCAAAAGGAGGTCAAACAAGAAG
TAACACCATCCTGTCATCTCAATCAGAAACTTATCAATAACACCAAAGCC
AGATATCGATTCTCTGGTCACTTGGTCGATCCCAACAGTCATCGGTTTTC
AAAAGTTGTCCGAATTATGGCATATGTACTTCGATTCATTAATGTACATG
TGTTCAAACAGAAATCACCTAGTCCATCACTAACAGAAGATGAACTTTGT
CATTCAGAAAAGTACTTCTTCCGAAAGGCAACAAAGGAAATCAAGCATTT
CACAGACCGATCAAAGTACAAAAAGATATCAATGGAAAAGGATGGCATAC
TTATCCACATTGGACGTATATTGCCAACAGATTCAATCACTGTTCTGGGC
AACTTGACAAAAACAATGAAGGATCTAAAGTCCACGACATTTTGTGTTCC
CCTTGTGGAAAAGTTCTCACCGATTGCCATCAGCATTGTCAATGATATCC
ATTGGCATCACCCGACCGCCAAACATTCTGGGAATGAAACAACTTGGCGA
CATGTTCTTCAAAAAGCACTTATCATTGATGGTAAATCATTGGTAGAGGA
TGTGCGATCTTTCTGTCAGCGTTGTCGTTACATAATGAAGAAACCCATCA
ACATTGAAATGGGTCCATTATCAATGGACAACTTATGCATTGCACCAGCC
TTTTTCATCACACAAGCCGATCTTGCTGGACCTTTTCAAGCCTTTTCTCA
ACATCACAAGAGAACAACTGTTAAAGTATGGCTTCttgtgttctgctgtg
cgaCTACAACAAGTGTCAACATCAGAGTGATGGAGGATTATGCAGCACCA
TCATTCATTCAAGCATTCACACGCTTTTCCTGTCAATTTGGTTATCCATC
AAAATTACTAATTGACGAAGGTGGGCAATTAGTGAAGGGTTGCCAAACAA
TGAAGTTCGACATGACTGACATTCAGCAACAGCTACACAAGGATGTACAT
TTGGAATTTCAAACATGTCCTGTTGGAGGGCATAATATGCATGGGCGAGT
AGAGCGAAAGATCAAGTCTGTTCGAAATTCACTCGACAAAAATTTGCAGC
TCCACCGCCTGTCAATTATCCAATGGGAAACAATGGCGTCAATAATCAGC
AACTCAATCAACAACATGCCAATCGCAGTCAACAACATAAAATCAGATGT
TGAAATGGCTGATCTTATCACCCCTAACCGACTCCTTTTGGGCAGAAACA
ATGAACGAAGTCCAACAGGGAGATTAACCGCTGAAAATGATCATATCAAA
CTGATCCGCGACAATCAAAAGATCTTCGACTCATGGTTTGACGCCTGGCT
TACAACTCATGTGCCAAGCCTCGTTGCGCGTCCCAAATGGTTCAACTCTG
ACACTGATATTAATATTGGTGATGTAGTTCTATTTACAAAACAGGAATCA
GTTTTATCCAATACCTATCAATATGGCATGGTTGATGAAGTTGAACGTAG
CCGAGATAATCAAATCCGTCGTTTAAAAATTCGATACCACAACGCAAGTG
AAAATTGTAAAAGGATTACAACACGATCAGCGCGTAGCTTGGTTGTTATC
CATCGAATTGAGGAAATTGATTGGTCCAAAGAACTGAATGATTGTTTCAA
TAATTAA Coding sequence (CDS) from alignment at sc0000311_pilon:150625..153131+ >XLOC_043455 ID=XLOC_043455|Name=XLOC_043455|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5014bp|location=Sequence derived from alignment at sc0000311_pilon:150625..153131+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATGGTTTCCAGAAGCAGATGAATCAGTATTGACAATCCTGAAAtc
aattttgccaaaaagtACCGTGGaaagaaaccaaaacaaatcaaagaagT
TCCACAAGCATTGACCCGTCGTCAATGCATGTCAAAAGTAGCAGAGGTCT
TCGATATTGCTGGCCTTGTCACCCCAATCACAGCCACACTGAAAGTTGAT
CTACACAAACTTGTCCTGAGGCGAATGGAGTGGGATGACGCACTACCAGA
TAATCTACGAAATGTATGGatatctcattttgaaatgcTTCAAGAAATCA
AgacaatcaaattcaaacgtGCTGCTGTCCCATCTTATGCTTCCAATCTA
GAGATCAACACTCTAGACTTCGGAGATGCCAGTGAAAATCTCATCTGCGC
TGCAATTTATGCAAGATTTAAACTGACAAATGGAAGCTACTCATGTCAAT
TGGTATTTGCCAGAAGTCGCCTTGTGCCAGAAGAAATGACACAGCCTCGT
GCTGAGTTATATGCAGCATTGGTCAATACGCATGCAGGAGAAGTTGTCAG
GAAATCATTTCAACACGCAACATCAGTCAAATTCACTGACTCTCAAATAG
TGCTTTATTGGATCACCAAGCCAACCATTCAACTCAAACAATGGGTGCGA
AATAGAGTCAACGAGATCAAAAGACTGACATCATCATCTCAGTGGGTATA
CGTACAAACAAATGACATGATTGCTGATATTGGTACACGAAGATGCACAT
CAGTCGAAGAAGTGGACCAATCATCTGTCTGGACAACTGGCTATCCATGG
ATGAAGCAATCCTCAACATCCTTCCCTTCAAAGACAATGGAGGAAATAAC
ATTAACCAACAGCCAACTGGCGGAGGTTCAAAAGGAGGTCAAACAAGAAG
TAACACCATCCTGTCATCTCAATCAGAAACTTATCAATAACACCAAAGCC
AGATATCGATTCTCTGGTCACTTGGTCGATCCCAACAGTCATCGGTTTTC
AAAAGTTGTCCGAATTATGGCATATGTACTTCGATTCATTAATGTACATG
TGTTCAAACAGAAATCACCTAGTCCATCACTAACAGAAGATGAACTTTGT
CATTCAGAAAAGTACTTCTTCCGAAAGGCAACAAAGGAAATCAAGCATTT
CACAGACCGATCAAAGTACAAAAAGATATCAATGGAAAAGGATGGCATAC
TTATCCACATTGGACGTATATTGCCAACAGATTCAATCACTGTTCTGGGC
AACTTGACAAAAACAATGAAGGATCTAAAGTCCACGACATTTTGTGTTCC
CCTTGTGGAAAAGTTCTCACCGATTGCCATCAGCATTGTCAATGATATCC
ATTGGCATCACCCGACCGCCAAACATTCTGGGAATGAAACAACTTGGCGA
CATGTTCTTCAAAAAGCACTTATCATTGATGGTAAATCATTGGTAGAGGA
TGTGCGATCTTTCTGTCAGCGTTGTCGTTACATAATGAAGAAACCCATCA
ACATTGAAATGGGTCCATTATCAATGGACAACTTATGCATTGCACCAGCC
TTTTTCATCACACAAGCCGATCTTGCTGGACCTTTTCAAGCCTTTTCTCA
ACATCACAAGAGAACAACTGTTAAAGTATGGCTTCttgtgttctgctgtg
cgaCTACAACAAGTGTCAACATCAGAGTGATGGAGGATTATGCAGCACCA
TCATTCATTCAAGCATTCACACGCTTTTCCTGTCAATTTGGTTATCCATC
AAAATTACTAATTGACGAAGGTGGGCAATTAGTGAAGGGTTGCCAAACAA
TGAAGTTCGACATGACTGACATTCAGCAACAGCTACACAAGGATGTACAT
TTGGAATTTCAAACATGTCCTGTTGGAGGGCATAATATGCATGGGCGAGT
AGAGCGAAAGATCAAGTCTGTTCGAAATTCACTCGACAAAAATTTGCAGC
TCCACCGCCTGTCAATTATCCAATGGGAAACAATGGCGTCAATAATCAGC
AACTCAATCAACAACATGCCAATCGCAGTCAACAACATAAAATCAGATGT
TGAAATGGCTGATCTTATCACCCCTAACCGACTCCTTTTGGGCAGAAACA
ATGAACGAAGTCCAACAGGGAGATTAACCGCTGAAAATGATCATATCAAA
CTGATCCGCGACAATCAAAAGATCTTCGACTCATGGTTTGACGCCTGGCT
TACAACTCATGTGCCAAGCCTCGTTGCGCGTCCCAAATGGTTCAACTCTG
ACACTGATATTAATATTGGTGATGTAGTTCTATTTACAAAACAGGAATCA
GTTTTATCCAATACCTATCAATATGGCATGGTTGATGAAGTTGAACGTAG
CCGAGATAATCAAATCCGTCGTTTAAAAATTCGATACCACAACGCAAGTG
AAAATTGTAAAAGGATTACAACACGATCAGCGCGTAGCTTGGTTGTTATC
CATCGAATTGAGGAAATTGATTGGTCCAAAGAACTGAATGATTGTTTCAA
TAATTAAATGAAATGGTTTCCAGAAGCAGATGAATCAGTATTGACAATCC
TGAAAtcaattttgccaaaaagtACCGTGGaaagaaaccaaaacaaatca
aagaagTTCCACAAGCATTGACCCGTCGTCAATGCATGTCAAAAGTAGCA
GAGGTCTTCGATATTGCTGGCCTTGTCACCCCAATCACAGCCACACTGAA
AGTTGATCTACACAAACTTGTCCTGAGGCGAATGGAGTGGGATGACGCAC
TACCAGATAATCTACGAAATGTATGGatatctcattttgaaatgcTTCAA
GAAATCAAgacaatcaaattcaaacgtGCTGCTGTCCCATCTTATGCTTC
CAATCTAGAGATCAACACTCTAGACTTCGGAGATGCCAGTGAAAATCTCA
TCTGCGCTGCAATTTATGCAAGATTTAAACTGACAAATGGAAGCTACTCA
TGTCAATTGGTATTTGCCAGAAGTCGCCTTGTGCCAGAAGAAATGACACA
GCCTCGTGCTGAGTTATATGCAGCATTGGTCAATACGCATGCAGGAGAAG
TTGTCAGGAAATCATTTCAACACGCAACATCAGTCAAATTCACTGACTCT
CAAATAGTGCTTTATTGGATCACCAAGCCAACCATTCAACTCAAACAATG
GGTGCGAAATAGAGTCAACGAGATCAAAAGACTGACATCATCATCTCAGT
GGGTATACGTACAAACAAATGACATGATTGCTGATATTGGTACACGAAGA
TGCACATCAGTCGAAGAAGTGGACCAATCATCTGTCTGGACAACTGGCTA
TCCATGGATGAAGCAATCCTCAACATCCTTCCCTTCAAAGACAATGGAGG
AAATAACATTAACCAACAGCCAACTGGCGGAGGTTCAAAAGGAGGTCAAA
CAAGAAGTAACACCATCCTGTCATCTCAATCAGAAACTTATCAATAACAC
CAAAGCCAGATATCGATTCTCTGGTCACTTGGTCGATCCCAACAGTCATC
GGTTTTCAAAAGTTGTCCGAATTATGGCATATGTACTTCGATTCATTAAT
GTACATGTGTTCAAACAGAAATCACCTAGTCCATCACTAACAGAAGATGA
ACTTTGTCATTCAGAAAAGTACTTCTTCCGAAAGGCAACAAAGGAAATCA
AGCATTTCACAGACCGATCAAAGTACAAAAAGATATCAATGGAAAAGGAT
GGCATACTTATCCACATTGGACGTATATTGCCAACAGATTCAATCACTGT
TCTGGGCAACTTGACAAAAACAATGAAGGATCTAAAGTCCACGACATTTT
GTGTTCCCCTTGTGGAAAAGTTCTCACCGATTGCCATCAGCATTGTCAAT
GATATCCATTGGCATCACCCGACCGCCAAACATTCTGGGAATGAAACAAC
TTGGCGACATGTTCTTCAAAAAGCACTTATCATTGATGGTAAATCATTGG
TAGAGGATGTGCGATCTTTCTGTCAGCGTTGTCGTTACATAATGAAGAAA
CCCATCAACATTGAAATGGGTCCATTATCAATGGACAACTTATGCATTGC
ACCAGCCTTTTTCATCACACAAGCCGATCTTGCTGGACCTTTTCAAGCCT
TTTCTCAACATCACAAGAGAACAACTGTTAAAGTATGGCTTCttgtgttc
tgctgtgcgaCTACAACAAGTGTCAACATCAGAGTGATGGAGGATTATGC
AGCACCATCATTCATTCAAGCATTCACACGCTTTTCCTGTCAATTTGGTT
ATCCATCAAAATTACTAATTGACGAAGGTGGGCAATTAGTGAAGGGTTGC
CAAACAATGAAGTTCGACATGACTGACATTCAGCAACAGCTACACAAGGA
TGTACATTTGGAATTTCAAACATGTCCTGTTGGAGGGCATAATATGCATG
GGCGAGTAGAGCGAAAGATCAAGTCTGTTCGAAATTCACTCGACAAAAAT
TTGCAGCTCCACCGCCTGTCAATTATCCAATGGGAAACAATGGCGTCAAT
AATCAGCAACTCAATCAACAACATGCCAATCGCAGTCAACAACATAAAAT
CAGATGTTGAAATGGCTGATCTTATCACCCCTAACCGACTCCTTTTGGGC
AGAAACAATGAACGAAGTCCAACAGGGAGATTAACCGCTGAAAATGATCA
TATCAAACTGATCCGCGACAATCAAAAGATCTTCGACTCATGGTTTGACG
CCTGGCTTACAACTCATGTGCCAAGCCTCGTTGCGCGTCCCAAATGGTTC
AACTCTGACACTGATATTAATATTGGTGATGTAGTTCTATTTACAAAACA
GGAATCAGTTTTATCCAATACCTATCAATATGGCATGGTTGATGAAGTTG
AACGTAGCCGAGATAATCAAATCCGTCGTTTAAAAATTCGATACCACAAC
GCAAGTGAAAATTGTAAAAGGATTACAACACGATCAGCGCGTAGCTTGGT
TGTTATCCATCGAATTGAGGAAATTGATTGGTCCAAAGAACTGAATGATT
GTTTCAATAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000311_pilon | genome | sc0000311_pilon:150625..153131 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 31-2508:30 |
| Aaloc | 1-27:1 |
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