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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:572179..577608- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043448.3 ID=XLOC_043448.3|Name=XLOC_043448.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5430bp|location=Sequence derived from alignment at sc0000094_pilon:572179..577608- (Clytia hemisphaerica_ch_hm2_pilon)
CATGGTTTTATCAATATTTCTTTTTCTGTTGAATTCTCAGTGTGCTATTT
TCTTGCGAGTTCATGTGTCATTTTTTCTTTGTGCGTCTCATTTGCTCATT
TTCTGTTTGTTCAATCACATTTTTCTCAGTTTTCATTTGCGTCATTTCAG
TTTAAGTATTTTATAATTTCAATTTTCAAATTTTCAAATAGTCAATCCTT
GTCATTATTTACTTTTCAATTCAATAGTTTGAACCTGTCAATCGTTACAA
ACGTCTCAAGTTTTATATCCCGCCACATTCAAACAAGTAGTCGATCATTC
ATCAAATTAATTCGTCGATTACATGTCAAGAAATCTTCGAAACATTCCAA
GGATCGACTATCAAATTCTCCACTCAACTGGGAAACGTGTAATCAAACCA
AATCAAACGTCAATACGAACCACCAACAGGACAGTTAATATGTCCGTCGA
AATAATCAATTCAACGAAAATCGCCATTCAAGAGGTCACCGATGTCATTG
AGGAGAATCCCACCTCCACGTTGACCGACATAGATGAATCTATTCAACAA
CTGATGGGGCTACGTTTGCTCCTCAGAGAAAACGAGAACGCAATCCATGC
CGAAAACCCAGAACACGAGCTTCTCGTCTCGACAAAAGCATCTCTTCAAT
CAATCAGAGATTATGTACGTAAAATCAAAGACTCCAGAGCAAAACTCAGA
CAAATCGTGGACACAAAGATTCAACAACAAAACGATGGTAAGAAAGACGC
TCTACTCTCTTCTCCATCAAGGACACTACACGAACAGTCAACGACCTTAT
CAAAGAATTCGAACAGAATACATCCAATCTCACCGATGAAGAGCTTATCC
AGATCAAATCCAGTCTTGCCAGCAGAGATAACCAAATCGACAGAATTGCC
AAGAAATATCAATCTATTCTGCTAGAAAAACCAGTTTCAACTCCTGAAAC
CTTATTGGAAATTAAAACATTAGGAGAGAGGTATGAACTATTAATTACAA
CAAAGTCAAATTTTGTCGAACACTTAACCTCTTCTCTTGGAGATCGTGAT
GTCTACAAACAAAAGCTCTTCTCAGCTGCCAAACTTAATATCGAAATTAG
CAAATTTAGTGGCTACGGTGACGTCATAGACATTTATACTTTCAAAGACA
ATTTCAGTAAGGTCCACGAGAAATCAACACCAAAAACATTTGTTAGGAGA
TCTTCTAAAGAATAATTACCTACAAGAACCAGCTTTAGGTGTCGTCAAGA
TGCTCACCGACATTGACGAGATTTGGTCACGCCTTAAATCAACATATGGT
GACGTTATGATACTACTCAACCAAAAAATCAACCGACTGGCCAATCTCGA
TCCTCTCTATCGGATGAAAGATCCTGAATCCACAGCCAACGCCCTCAACA
AGATGGTCAATCTCCTCAAAGAGTTATCGACAACTGCAGAAACACACAAG
ATCGAGCAGTTCCTCTACTATGGAGGTGGTATCAACAAAATCTACTCGCT
GATCGGAGATGCTAGATTATCTCGTTGGTTGACACAGATTTCAAACGAAA
CGTTATCCCCCAAAGCTGAATGGAAGAGACTCATCATTTTCCTTGAATCA
GAGATGAAGATTCAGCAACAAAAGATGTTGATCAAAAAGCAAACCAACGA
ACCTCCAAAACAACCACCGAAACAACCACGTTCACATTATACTGATACAG
AGGTGAGTGATCCTACTTCATCCCCTCCTGACCAATCGAAATGTTTTATT
TGTGATTCGTCCGATCATATATTGACTTCTGGTCCACAGGGCACAAAATT
GATTCAATACTTTGTGTGCAAAAAGTTCGTCGAAATGACACCTTCAAATC
GTTTTGCAGAACTCAAACGTAAAAACCTTTGCTATCAGTGCTTATTTCCA
GGAGCTCAAGCCACTACAGGAAAACATCGTGAAGGCAAATGTCAAAAGGT
CTTCACATGTCAACATCCGAGCCACGAGAAGTACACAATGAAGAAGCACA
TTCTCGTTTGCAACGACCACAAGTCAGATCCCGGCAACCAAGAAGTACTG
GAACAATTCAAATCGCGATGCATTGTCAAACGACCCAACATCCCAGAATT
TTCAAAAACGATATCGAACTACTACACGTTTCAATCTTTTCCAATCCGTC
CACAAAATGACGACTCAGCTTCAGGTATATATCAGCTTCAACAAATCATC
ATCAACTCAAAATCTTACCTGATCTTCTACGATTCTGGGTGCAGCGATTT
TGTTGTACGTGACCACGCGATCGATCAATTGGAATCGAGAGCCCGACTTC
AAGAAAAGGGACCTATCAAGCTTGGTGGTGTTGGCGACGTATCAACACTG
TCATCCAAGGGCATCTACAGTATCGATCTACCAACCTTTGACGGCTCAAA
TGTGACACTCACCGGTGTCGCTCTCAAGAAGATCACTTCAACATTTCCAA
ATTACCCTCTCGATGGTCAAGTCAAAGATGATATCCATGATGCATTTCGT
CGGAGTGGAGGGAATCCGTCAACTTTACCAAAGCTTCCATCATCTGTCGG
AGGTGACGTCGACTTTATGATTGGCATACGATACCTACGATACCATCCCA
AGGTGATCTTCCAAATGCCTTCAGGACTCACCATTTACAAATCATTGTTC
AAAAATCCAGATGGCAGTCGTGGTATAATTGGAGGACCACACGAAATATT
CTCAATGATCGAACAGCAATTCAAAGGAAGTGGTAAGAATACTTTCTTTT
CAAATCAATTAACAATTTATAAGTCTGGTTTTAGTGTCAACCCAGACGTA
CCACTCCTTTGTGCAAAACCCAACAAAAACCAATTCGACGAAGCAGAGAC
AGCTGGGTAGCATCATCAATTACCGATGTATGAAGTGTCGAGACTGCGAA
AACTGCAAGACCAACGATTCCATAACAGCCATCAGTATTCGTGAAGAGAT
CGAACAAGATATCATCAACAAGTCAATCGAAGTCATACCAAACGAGAAGA
TCACTGTGGCGACTCTACCCTTCACACAAGATCCCAATATCAGACTACAT
CCAAATCGAATGAAGGCCAAGAAGGTGTACGACCAACAAGTCAAGAAGTT
ATCCTCTTACCCGAATGACAAACGTGACGTCATCGAATCTGAGGCTAAGC
TCCAAAAACTTGGCCACGTCGACTTCATCAGGAACCTTCATCCCAACGTT
CAAAACCAATTGGCACACAGCCCAATTCAAAACTTTATACCATGGAGGGC
AGTTTGGAAAGCAAGCTCCGTCACAACACCTTGCCGAGTCGTTTTCGACG
CATCACAACCAACAAACAGCGGCTACAGTCTTAACTCAATTCTCGCAAAG
GGCACCAACGGTATGAATAAACTTGTCGAAATCCTCATTCGCTGGTACTG
TCACAAAGTCGCATTTCATACTGACGTAACCAAAATGTACAACGCAATCA
AACTCGATCAAAGCCAATGGTGCTACCAACGATACTTGTGGAACAACGAT
CTTCATCCCAACCAACCTCCGGAAGAAAAAGTTATCAAAACCTTGATTTA
TGGGGTTAAGTCGAGCGGCAACCAGGCAGAGCGAGCAATACGACAAACGT
CAGCACTATCCAAAAACGAATTCCCTGAGATCGATCACATTGTCAACTTC
GATCTCTATGTCGACGACTGTATCACTGGAGAAGACAATCTCAAAACCGC
CATGGAAAGAGCCGACCAAATGGAAATCTCACTCGGTAGAGGTGGATTCC
GATTAAAAGGCTTCACCTTCAGTGGCAGCGATCCTCCAGAATCACTCTCC
AAAGATGGCAAATCAATCGGTGTAGGAGGAATGATTTGGTATCCTAAAGA
TGACGAAGTATCGATCGACGTATCCGAACTAAACTTCGCCAAGAAACGAC
GAGGAAAGAAACCAGATGAGAAAGTTGGTATCGTTCCATCCACCCTCACA
AGGCGTCATTGCGTATCCAAGGTGCACGAGCTATTCGACATCACTGGGAA
GATCACACCAATCACTGCGTCACTCAAGATTGATCTCCACAACATCGTAC
AGCGTGGTTTGAAGTGGGACGATGCCATACCGGACAACCTTAGAGCCATA
TGGGAATCCAACTTCGAAATGATTCAAGAGATAAAATCAATTCGATACGC
CAGAACCATCGTGCCTGATGATGCAGCCAACTTAATGATTGAGACCATCG
ACTTCGGTGATGCAACCAAAGAGATGGCAGCCGTTGCTATCTATGCCAGA
ATACTACGTTTAAACGGTGAATATTCGTGCCAACTCGTATTTGCTCGATC
AAAGATTTTGTCATCATCAACTCAACCTCGAGCTGAACTCGAAGCAGCTG
TCCTCAACACTCATACTTCCGAAGTCGTCAAACGTGCATTGAAGTCCAAA
CACAACGGATCAATCAAATTGACAGACAGCACCATCGTTCTACACTGGAT
CAGTAATGATGAAATCTCCCTCAAGCCATTCGTTCGAAATCGAATAATCG
AAATCATTCGACACACAACTCGTGAAGATTGGCAACACATCGACACAAAC
AACATGCTCGCAGATATCGCAACTCGTAAAGGTGCAACAATAGACGATAT
CAGCAGCAAATCAACATGGATCAATGGGCACTCCTGGCTCAGGGGTGACA
AATCAACCTTCCCAACCAAAACTGTAAGTCAAATTAATTTCAATTCTACT
GACTTATGTGAAATCAAGAATGAGGCAATTCAAGGCAGTCGTGAAGTTTA
CTTGGCATCAATGAAGATTGTGTCCGAAGTTCGAGATCACTATTCATGCT
CCAAATATCTGATTGACCCAAATAAGTTTCGTTTTCAAAAGGTCATCAGA
ATACTTGCTCAAGCCATTAAATTTCTACAACTACTTAGATCTTTAGTAGC
TCTACGTAAACAATCATCTGCACCAACCTACGAATTCAAATCAAATGGAC
GACTGACTGATGACGATCAACTCAAGCAAGCCGAGACGTACTTCTGGCGC
AAGGGTACTGAAAGAGGTGAAACAGTTCGTCAGCAAAGAGAAGTACAAAC
GCATATCAACAGAGATTGACGGCATCCTAACGTATACTGGTCGTATCATG
CCAACAGACGAAATCAACGTGATCACTCCGATGACGAAAGTGATGAAAGA
TCTACATCAAACGACCTTCTGCGTTCCAATCATCAGCAAACATTCACCCA
TCGCCTACGCCGTCCTGAGTGACGTTCACTGGCACAACAAAGTCGTCAAA
CATTCCGGCATCGAAGCTACGTTACGCTATGCATCCCAGAAGGCATTCAT
CATTGAAGGACGCGAAGTTGCAAAGAAGGTCAAAGCATCTTGCAAATTGT
GTCGTTTCCTCGAAAAATCGAAAGTCAAAGTCAGCATGGGCAAAACACCA
AGTTGTTGCAGAACGATTGCTCCTGCTTTC Coding sequence (CDS) from alignment at sc0000094_pilon:572179..577608- >XLOC_043448.3 ID=XLOC_043448.3|Name=XLOC_043448.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=816bp|location=Sequence derived from alignment at sc0000094_pilon:572179..577608- (Clytia hemisphaerica_ch_hm2_pilon)
CATGGTTTTATCAATATTTCTTTTTCTGTTGAATTCTCAGTGTGCTATTT
TCTTGCGAGTTCATGTGTCATTTTTTCTTTGTCATGGTTTTATCAATATT
TCTTTTTCTGTTGAATTCTCAGTGTGCTATTTTCTTGCGAGTTCATGTGT
CATTTTTTCTTTGTCAGACGAAATCAACGTGATCACTCCGATGACGAAAG
TGATGAAAGATCTACATCAAACGACCTTCTGCGTTCCAATCATCAGCAAA
CATTCACCCATCGCCTACGCCGTCCTGAGTGACGTTCACTGGCACAACAA
AGTCGTCAAACATTCCGGCATCGAAGCTACGTTACGCTATGCATCCCAGA
AGGCATTCATCATTGAAGGACGCGAAGTTGCAAAGAAGGTCAAAGCATCT
TGCAAATTGTGTCGTTTCCTCGAAAAATCGAAAGTCAAAGTCAGCATGGG
CAAAACACCAAGTTGTTGCAGAACGATTGCTCCTGCTTTCCAGACGAAAT
CAACGTGATCACTCCGATGACGAAAGTGATGAAAGATCTACATCAAACGA
CCTTCTGCGTTCCAATCATCAGCAAACATTCACCCATCGCCTACGCCGTC
CTGAGTGACGTTCACTGGCACAACAAAGTCGTCAAACATTCCGGCATCGA
AGCTACGTTACGCTATGCATCCCAGAAGGCATTCATCATTGAAGGACGCG
AAGTTGCAAAGAAGGTCAAAGCATCTTGCAAATTGTGTCGTTTCCTCGAA
AAATCGAAAGTCAAAGTCAGCATGGGCAAAACACCAAGTTGTTGCAGAAC
GATTGCTCCTGCTTTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:572179..577608 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 85-408:325 |
| Aaloc | 1-81:5431 |
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