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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000166_pilon:130448..137292- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043440 ID=XLOC_043440|Name=XLOC_043440|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6845bp|location=Sequence derived from alignment at sc0000166_pilon:130448..137292- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCGTTTTCTTTTGGCAACACGAGCTCTTCTTCAACCTCAGGATTTGG
TGGATTTGGAGCTACATCAAAGCCTTCAACAACAGGTTTTGGAGGATTTG
GATCAACCTCCACAGGTATGTTCAGTTTACCTATTTATTTTTTCAGTCGT
CATAGAGAGTTTGCCTCTAGTTTTCTTTTTGTTGTCTCCATAATAGAGAG
TCCCCTTCGGGACGTCTTTGAACCCAGAAATATGGCGCGCCAAAAGGCTT
TTTAATACCAACTTTTTTTTATAATACCAACTTTTTTTTATAATACCAAC
TTTTTTTATAATATCAACTTTTTTTAATAATGCCAACTTTTTTTTATAAT
ACCAACTTTTTTTATTATAATACCAACTTTTTTTTTTATAGTAGAGTCCC
CTGCCCAGTTGGCGACCGAACGTCTTTGAACCCAGAAAAGTCATACATAA
ACAAACCTCTGGAGAATTTCTTTTGGTAGTTATCTGCCTTGACCTATTTC
CCGTACTGTGTAAAAAAGGTTTTAGAAAAAAAACGAGTAGAATCCGAAAG
ATCCAACTTTGCACGGAAGCACACGAAAAAGCCGGATTTTTCAAAAAAAA
TAAAAAATGGCTACCTGTGGACAAAAAATCTTCGTAAGAAAAAACGCTTC
AACTCCCACGCCAAAAAATACTTGTCCAAAACATTGAGTATGTTAGAAAG
CATTTCTGTAAAAATCAGCTCGATACAGTTTCCTTCGTGTGAAATATTGA
TAAAAAAGTTGATGCAATCAGCTTCGAAATTTGACGTCCAGTCTGCGACC
GACCAAACTCAAAAAATGAAAAAGAAGACTCTACATTGCGATCAAAAAAT
TCCAGACGCGAAGAGAAAAAAACAGGCATAAAAAATTCCCGCGTTTTTAT
CAAATGAAGACTCTCCATAGACCGCCACTTTCAAAACAAAACAAATACAA
ACTTTAGAAAAAAATGGCGACTTGAAGAAAAATTCTGAAAAAACATGCCG
AAGGGAAATGTAAGTGAGCTATTTTAAAACAAAAGAACAAGTGTAAATAA
ATTTAATACGGGAAAGCTTATGAGTTTTTTTATCATCCTGATCAATTAAT
ATGACCTTACCTGTAAGTAGAGCACTGATTTTCTCTTTTTAACGATCGGT
CGCAGACTGGTATGTCGGTCGGGAACTGGGCACTAGTACCGCTCGCTTCG
AAAGTTTTTTATTCTAAGAAGATCGCCTCAAATAAAAAATCAAAACAAAC
ACGAAGAACATGTTAAAAGTTGTCTAACCATTGGTTGAAAAGGATTTTCA
AAAAAGTTAAAAGTAAGTGAAAAATTCGAATCCAAAAATTTCGGTCGCCA
ACTGGGCAGGGTACTCTACCAACTTTTTTTTTAGTTCGAAGTTTTTTCAT
AACACCAATTTTTGTCTCGCTTACTATGCGTGTATAATCGATCAAGTGTA
GAAAGAGTCTTAGCGCGATGCAAAGCGTAATGGGTAATCAGGACCACTGC
GCGCTGATGACGACTTATTATTGGTCCAAAGTTTTGAAAAAATTTAAAGA
TTTTTGCGTCTAGCCAACCGGAAGTCGTTACTAGAGCGCAACCAGTCCTG
ATTACCCATGATTCATTTCGAGTGTGAAATGGCCTATTTGTTGCCAACCA
AAATCCATCAACCGAAATTCGAAGTTTCCATGGAGACGACAAAAAGTTGC
GCTTGAAATCGAAAGTGCCTTCTAGTCTTTACTGAACTCAGCGTCATTGA
AATCATCAAAATGCAAAGTTAATCCAAAAGTAGACTCTAGTCTAGATTAC
ACTAGGCTCGATACGCCAATACGCCAGCCAGCCATCGAAATGTTAGACTA
GAGTATACTTTTAGACCAATTCCCTTCTTGGGATGGTAATTATTATTAGG
ACTAAGTTTTGGACGGGTATTTACTGTCAGTATTTGGCCTAAAATTGCTG
ACATGGGGAATAAACTTTTAAATCTGATACATAGATCAAAACGCTACCAA
CAGCTGGAAACAAAACCTTTAACGATCGATTCACCTATCGACCTATTATT
TTAACGCGAAATTTAAGACATTTACTTTCACATGTAAACAAAAAATATTT
TCCAGTGAAGAACCGTAAAGGTCCGTCTATATGGTGAAAAAAGAAAATTG
ACTAAGCGAGACCAAAAAAATTTATATCATAAAAATGAAAGTTGGTATTA
TAATAAAAAGTTGGTATTATAAAAAAAAGTTGATATTATAAAAATGAAAG
TTGCTATTATAAAAAAAAGTTGATATTATAAAAATGAAAGTTGGTATTAT
AAAAGTGAAAGTTGGTATTATAAAAAAAATTTAGTATTATAAAATAAAGT
TGATATTATAAAAAAAAGTTAGTATTAAAAAGCCCTTTGGCGCGCCATAC
AGAAAAGTCATACAATAACAAACCTCTGGAGAATTTCATTTGGTAGTTAT
CTGCCTTGACCTATATCCCGTACTATGTAAAAAAATTCTAGAAAAGAACG
AGTAGAATCCGAAAGATCCAACTTCACTTAAACACATGAAATAACCGGAT
TTTTCGAAAAAAATTAAAAATGGTGTGGACAAAAAAGCTTTGTAAGAAAA
AACGCTTCAACTGCCACTCCAAAAAATACTTGTCCAAAACAATGAGTACT
GTGAAGTCAGGTAACTTGCATCAGTGGAGGCTAACATGCATAGCCCTTAA
ATGACTGACCAATAATCAAAGCTGCAAAATTTCAAAACAAATGAACTACA
CAGCTTCGCTCGCAGGGCAGCTCTACTCTACTATTTTTGTTTTGATTTAA
CTTTGTATTTAAAGGACCAGACAGGTCATTCATTTGAGGGCTATGCATGT
TAGCCTCCACTGATACAAGTTACTATCCGACTTCACGGTATGTTAGGCGA
CAATCACAAATATCTTCGTTTCGCGTCGCACGACCGACTCTCGAAAAATT
GAGGAGAATTGAGTCGGTAAATGTGTCGGACTTTTTCTTTCTTTCGTTCA
AAAACTTTATTATTGCCAATTTTTTGCGAGTGATTTCTAGCGCATTTGCG
GCATTTTGACTTTGTTTATCATTACATGCGCAGTTTTTGATTGTCAGAGG
TCACAGTGTTCAAAGGTCATAATTGGAAACCACCCATAACACGTGGTTGT
TTTGGGCTGGCTGGCTGGCTGGCAGTTTCATTCAAGAATACACTCCAAAA
ATGGATGATAGAGGTAAGAAAACCCGAAAATTTTTACGACCGACCAACCG
ACCAACCCACTTTTTAGATGAAGATATTTGTGATTGCTGCCTTAGAAAGA
AAGCATTTCTATAAAAATCAGCTCAATACAGCTTCCTTCCTCTGAAATAT
TGATAAAAAAGTTGATGCAATCAGTTTTGAAATTAGATGCCCTGTCTGCG
ACCAACAAAATCGAAAGTAAGAAAAAGAAGACTCTACATTGTGATCAAAA
CATTCCAGACACAGAGAAAAAAAGAAGACTTTAAAATGCGATCAAAACAT
TCAAGGGACATGCCCGCGGTCTTCAACTTGACAGTTCTAATGCGAAGTTT
AAGGCGCTTTGGTATAGTGGTCATCGACCTTGGTTAATGTACAGGCGACT
GAGGTTCGAATCCCACTTGCAGCAGTTCACTTGGCAAGTGAATGAACCTT
TGCCTGGGTCAACCCATGCCATGTGAGGGGAATTGGGTAGTCAGTTCAAG
GTGCTGACGGGGCACTATAATTGAAAGCGTCTATAGTTGCGAAAATGGGT
CTCAAAGCCTCCTGCGACTCAACCAAATAGAAATAGAGAAGAAAAAAATC
TCTTTGACAATAAATTTGTTTTGATAACTCCACCAAGTTTATTAATCTTA
CTTCTTTGTTCCTCTTAGAGTGCACACACACTCGCCTGTGTTCCACTACG
GATTTTTCTCATATTTCAATTTAAAAGCTTACTCGGTGCGAAAGAGAAAT
TGTGTATTTTTAATACGCCGTTCATTAACTCAAATCAAATGTCTTTGGAG
GTTCAGTGAAATGGTGGCCAAATTGCCGTCCCATGTTTTGTCAGATAGTT
CCAAGTATTATAGCTCAAATAATGTGAATACGCTACTCTCACCAGGTAGG
CGTTCACACCGCAAATGGAACAAATCTTTGCGACAAGAAACACGTAAATG
TGATCGCACGCATTCGCACAAGCGTCCAAATACAGATATAAAAAAGTCTG
TTTTTCCGTGGAAAATTGTGAGTACTGTTATCGACACTCGGTAACTTTGA
CATGTCAATCAATTGCGCACACTGGAAAAAAGTCTCTGAATATTTCATTC
TTCCCAATAAATGCGAAAATGAAAAACGAAGAAGCTTTCGTTTTCTGATC
GTCTTTTTAATCTGCCATGAAGTGTTATAAAATTCCTTATAGAAAGACAC
ATTCTTCTCACAGACCTGAGGTGTGCATCTAAGAACCGGTTTGATTACAA
TTCTAATTTGTTATTTAAAAACAAATGATATATATTAAGTCTTTTCCACA
CTTTATTAAGTTTTTCTTTAATTAAGTGAATGGAGGTCTTATCGTTGCAA
GATCTATTTTAGTTAGTAGGCCATTTTTGAAAGGCAACCTTGAAAGATTT
AACTTTATTCCATGAGGCAATTTTATCCAAGGCAAAGGGAGATGTAAAAA
TCATTCGATTTCAGATGAAAAAAATGGCACATCAAAAGAAAATTTGTTGC
TGAATAGGGCACCTAATTCATAGCAAAGTCTTAGGGGTACCTTGTAATCA
TAGAGAATTGATAAATGGGATTAATTTATGACACCACTGGCTATCATTAA
TGTTGTTTAAATTCGTGATCTCTTTATTATATATGAAATGATTAATTATT
TTTCAAAGGTGGAGGATTCAGTGGTTTTGGTGCAAAAACAACAGCGTCAA
CAGGATTCTCTTTTGGAACTCCATCAACTGCAACAAGCACAGGGGGAGGA
CTCTTTTCAGGATTTGGTTCAACAACCAAAACAACAGCTTCTACAGGTTT
TGGTGGATTCGGCACAGGAACAACAACTGGTTTTGGAGGATTTGGTGCCA
AAACAACAGCTTCCACATTTGGTGGGTTTGGAACAACAACTACATCTGCC
TCAGGTAGTAAGTTATTCTCATTATTGTTTGAATAAGTTTTCATATTATT
TTTTTATGAATGATAATCTGCAATATTCTCTTGATAACAAAACCTCAGTT
ATATGGTAAGTAAATATATTCATCTGGTGGCTGAGTGTGGAGCCAGGAGA
GAGGGAGTCTATCCCCTTTTCTATTTTGCGCTAGTACAGGGAGATCGAAT
GCTGAAGTGGAGCGCCACACCTACTCTTAGCTTCCAGTAACTTACCACCC
AAATTGATGAGTTGAGTGAAATCGGTGAGTTGGCGGTGACCGGGGATCAA
CCCACAACCCTCAGATTGTTTGGTGAATGCAGGCCACACAGTCATATTTA
CACTAGCATATTTTATACCTATGTATAAATTTACCTTTTTTCTCGATTTT
ACTTAAAGCCAGGGATACGAAAAAATAAAAAAAACGGCTGAGAAAAGGCT
GATCAATTAAAGACATAGAAATCACTTCTTCCTGTCGTTTCCCAATTGTT
TAATCTAAAATATCTTACCATGTAAAATCCTGCTATTTGAAAATTTGAAA
TCTATTTATTTAAAAGTGTAGGTGCAATGTACATACATACTTTTGATAGA
AATTTTTATATTAACATATCATTTGATATTAAATTTCTCATCGTTCTTTT
CAGGATTTGGTACAACCGGCAGTCTATTTGGTGGTAGGTATCTTTGTGGT
CAAATTTGGTCAATTCTCAACAAATTCTGAAGAAATTCTGAAGAATTCTC
GAAAAACTGTTTCTGTTATAAATCTTATCAGAGTAAGGTTTCAGTTATTG
AAGTTTTCTTTGTGTATATTTTATGGCCTTTGATTTTTAGGGTTGAACAA
AACAACAACAGCAAGCACTGGTTTCTCTCTTTCCAATCCCACCCAAACAG
GATGGAATGCTGGTACGACACGTAGTTCTTCTTTGTATTATTTTGTCAAG
TAGCAAATGATCATTTTCATGATGTAGTTTTTTCTCAAGTTTCCAGTTTA
TAACGTGTCATCCACTTAACATCAGTTTCTGTCAGTTTTGATGTAAAATC
TTATCCTCTCAAAAAATAATTTACTCAGTGGTAAAAAACGAGATTGTCAA
CTTGTTTAGGTCAACAACAACAGCAGCAAGCTCAAGGTTTGGACAATCCA
TTGGCAAGCATGACCAGTGCACTGACAATGCCCACCATCTTTGGTGACGA
GCGAGATGGCATCATTGCCAAACTGAACCAATTGCAAGCATTGTGGGGTG
AAGGGAAAGCTGTTTATTCACACAACGCACAACCTATTCCATTGTCACAA
GAAAACCCTTTTTCACGATTTAAGGTACGGCTGTTCAGTTGATTAATTGC
TATTTAGGAACTTTTAATGAATTTTACTTTTCGAGACACTATTAATATTA
TTGCTTGGTTTCTGCCAATATAACAAGAGTGAAGCTTTTGGCTCGATGCT
AGTGGGTTTTGTTGTGAATAAGAAAAGTAATAAGCAGCTCTTTGCATGCT
ATGGTGATTACAAACACTAAAACGTAATAATATCCAATCTTTATCACTGA
CAGACGATAGGTTACAGTTGTTTACCATCTGCGAAAGACAGTGATGGTTT
CATTTCGTTCGACTTGAAACACAAGGAAGATTACGTGAAAACCAACCAAC
AACAATTTGTCGAATCCATCAGTAAAATCATGGGCAACAAACCGACATTC
TCCGTATGTGTTGATGGATTACGCAGTCTTCCTGGTGACAGGTAA Coding sequence (CDS) from alignment at sc0000166_pilon:130448..137292- >XLOC_043440 ID=XLOC_043440|Name=XLOC_043440|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1746bp|location=Sequence derived from alignment at sc0000166_pilon:130448..137292- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCGTTTTCTTTTGGCAACACGAGCTCTTCTTCAACCTCAGGATTTGG
TGGATTTGGAGCTACATCAAAGCCTTCAACAACAGGTTTTGGAGGATTTG
GATCAACCTCCACAGATGCCGTTTTCTTTTGGCAACACGAGCTCTTCTTC
AACCTCAGGATTTGGTGGATTTGGAGCTACATCAAAGCCTTCAACAACAG
GTTTTGGAGGATTTGGATCAACCTCCACAGGTGGAGGATTCAGTGGTTTT
GGTGCAAAAACAACAGCGTCAACAGGATTCTCTTTTGGAACTCCATCAAC
TGCAACAAGCACAGGGGGAGGACTCTTTTCAGGATTTGGTTCAACAACCA
AAACAACAGCTTCTACAGGTTTTGGTGGATTCGGCACAGGAACAACAACT
GGTTTTGGAGGATTTGGTGCCAAAACAACAGCTTCCACATTTGGTGGGTT
TGGAACAACAACTACATCTGCCTCAGGTAGTGGAGGATTCAGTGGTTTTG
GTGCAAAAACAACAGCGTCAACAGGATTCTCTTTTGGAACTCCATCAACT
GCAACAAGCACAGGGGGAGGACTCTTTTCAGGATTTGGTTCAACAACCAA
AACAACAGCTTCTACAGGTTTTGGTGGATTCGGCACAGGAACAACAACTG
GTTTTGGAGGATTTGGTGCCAAAACAACAGCTTCCACATTTGGTGGGTTT
GGAACAACAACTACATCTGCCTCAGGTAGATTTGGTACAACCGGCAGTCT
ATTTGGTGGATTTGGTACAACCGGCAGTCTATTTGGTGGGTTGAACAAAA
CAACAACAGCAAGCACTGGTTTCTCTCTTTCCAATCCCACCCAAACAGGA
TGGAATGCTGGGTTGAACAAAACAACAACAGCAAGCACTGGTTTCTCTCT
TTCCAATCCCACCCAAACAGGATGGAATGCTGGTCAACAACAACAGCAGC
AAGCTCAAGGTTTGGACAATCCATTGGCAAGCATGACCAGTGCACTGACA
ATGCCCACCATCTTTGGTGACGAGCGAGATGGCATCATTGCCAAACTGAA
CCAATTGCAAGCATTGTGGGGTGAAGGGAAAGCTGTTTATTCACACAACG
CACAACCTATTCCATTGTCACAAGAAAACCCTTTTTCACGATTTAAGGTC
AACAACAACAGCAGCAAGCTCAAGGTTTGGACAATCCATTGGCAAGCATG
ACCAGTGCACTGACAATGCCCACCATCTTTGGTGACGAGCGAGATGGCAT
CATTGCCAAACTGAACCAATTGCAAGCATTGTGGGGTGAAGGGAAAGCTG
TTTATTCACACAACGCACAACCTATTCCATTGTCACAAGAAAACCCTTTT
TCACGATTTAAGACGATAGGTTACAGTTGTTTACCATCTGCGAAAGACAG
TGATGGTTTCATTTCGTTCGACTTGAAACACAAGGAAGATTACGTGAAAA
CCAACCAACAACAATTTGTCGAATCCATCAGTAAAATCATGGGCAACAAA
CCGACATTCTCCGTATGTGTTGATGGATTACGCAGTCTTCCTGGTGACAG
GTAAACGATAGGTTACAGTTGTTTACCATCTGCGAAAGACAGTGATGGTT
TCATTTCGTTCGACTTGAAACACAAGGAAGATTACGTGAAAACCAACCAA
CAACAATTTGTCGAATCCATCAGTAAAATCATGGGCAACAAACCGACATT
CTCCGTATGTGTTGATGGATTACGCAGTCTTCCTGGTGACAGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000166_pilon | genome | sc0000166_pilon:130448..137292 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 682-873:193 |
| Aaloc | 469-681:635 |
| Aaloc | 397-465:904 |
| Aaloc | 367-393:1091 |
| Aaloc | 118-363:1986 |
| Aaloc | 1-114:6846 |
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