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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000166_pilon:245729..249848+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043438 ID=XLOC_043438|Name=XLOC_043438|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4120bp|location=Sequence derived from alignment at sc0000166_pilon:245729..249848+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTATCAGCTAGTCACAAATTCAAAGGTAATTCTACTTTGAAATACTA
GTTAGTGTACTCATTTATTGGATTGATCTTTCATTTGCAGAaccattttg
catttttcattcCTTCTAgctaaaggttttatttttagatgagtgttttc
gtttcatatcagacacatatttcatatcaggacagtgtctatctattgtt
atattatgctgatataaacaaaaaaatgtttttctttccctctttctgat
caTCTTGCTCCACCTCCGTGTCaatcaaaatgtgaaaaagcttgcaaatt
aaaattgatgagtaagcaaacaaacGATATTgctcttattcaaaaacaaa
acctttaagaagcATTGTCAGCGGTGATCAGACGCTGCCCTTGTAAcaaa
ttatgagaaaaatattttggtctgcgATAGAAGCAGCCCTACTTTTTTAG
AATATGGCCGGATTTGATAATATAGCCTTAAATCTAGAGAATTCCAACAG
TACAGTCTAGTGTATAATTTATGCTAgaaaaaaacattcattttaactct
gaaaacttaattttcaatacttttgcTGACTTTAAtaacaaatagacctt
ttgctaaaGACAATgacatgttgaataattaattcTCAGCGTCAAAATAA
TGACATATTCTGCATAATAATACTAATTACATGTGACATCATTTTCACCC
ACGATTGACcagccatttttctaagaaacagAAGGAAGGATGATTTAGTA
ACACCTTTATTAGCTCCATTGCTTTTAGGCAGGATTCCACTTTGAACCTG
GGCATAGTTTTgtatttgttttctttgatgatGATTGTATGTCTTTTTAT
TTCCTGGGTGAAAATTTTGTCTTTGAGAACAGGCGGCTTGCATGAGTTGG
CTGAAGATAGTTCATCACTAGATTTTGCCAAATCTGTCTATAAAgtaaga
attaaaaaattgtcaaactTACTTTGTGTCAATAACATAAAACCATCAAT
TTGAGTTTCTTTCATATAAGTCTGTAGTTACttttgaatttataataatg
CCTTAAAGGTCCAAATAATGACCAAAAGCAGCAGAAATGACATATAATTA
ACATATTTagtgtttgtaattttttatctaagaaaGATAATAAAAACCTT
GACacaaatttgaaatcagcaaggattttctaaaaaagtctTATCTCATG
AGTTTTTTATCAGAAgaagaaatcttcatttttttcatcttcattcttct
tcttcatttttaaacttttcaaaaatcttttatctaTTAGATTAGCTCCT
TGgaattatctttccaatgatgtATAGCTTTCTATACAAAGGTAGTCAGA
ATCGGCATTTATTTATCTGTCTATATAATCTATTGAAAATTTCAACGGGT
TAGATTGATCCAAAAATACAATTTGTATATATGTGATTATTGAACAAACA
AAATCATACTTTATTTATAGGTATCTTAAGCAACCCAGTCACCTACGTCA
TAGCATGTTCAATCGTATCAACTGTTGCtttttttGCTATCTGTGCTTGG
TGTTTCAAAAGGAAGAATAAGCGAAAACGGAGTGATGATGGAGATACTGA
TGCTGAGGATCTTGCAGATTACCCAGTTTCTGAAACATCTAAGCGTCCAT
TACTTGGGTCTTCATCATCAgccaaaaataaatcaaatggTTTCTCATTC
CTAAATTCTTCAAAAGATGATGGAAAATCTCGTTCACAAAATTCATTGGG
TAAAGCTTCTAATGAATCACCAGTTAATGAAATGCCTGGATGGGGGCGTA
AAACATTGAAATTCGGAAGTCCACCAGGCGATACAACATTTGAGAGCATG
GGTGTACAACCAAAAAATAAAGACTTGTCACAATCCTATGATTCTTTAGT
TTCTTCCTGGGCATCTATTCCAGACGAGCCAGAAATTCCTACGGATAGAG
GAGAAGATTTGGGTTCTATTTATTTTAGTGTTTCATATGATGTTTATGAT
TTAGTATTGAAATTGACAATTCAAAAAGCTGTTAATCTTCCAGCCAAGGA
CTTGTCTGGTACAAGTGATCCTTTTGTGAAAGTATTATTATTAcctgata
aaaaaaataaacttgaaaCAAGAGTGAAAAGGAAAAAGCTGAATCCAGTA
TGGAATGAAGTATTTACATTTGAGGGATTTCCCCATCAAAAGTTAGTGCA
AAGGACTTTATATCTGCAAGTTTTGGACTATGATAGATTTTCAAGGAATG
ATCCTATTGGTGAAATTGAATTGCCATTATCGGAAGTTCATCTACAGTCT
GAACCTGTTCCTTTTGTGAAGAAGTTGAGTCCATGCAAACGTTCAGCTGT
AAGTATTTTAGATTAATCTTTAATTCATTGTGGGGGAATTTTTTCCACTG
CTGAGATCTTGATTCACAGAACACTTGTATTCCTCAGAAATTACGAGTTT
TATTATTCAGGTTTTCTCTGTAGGATGAAGTTTCCCTTTATCTTTGAGGG
CATATTTTACTCTCACAActtcttttttcacaaaaaaaactaatctaAGG
TTTAACATGATCactgtttttctcttttgataTAGGGATGAAATTTATAA
CAATCTTTCAAAGGTCTTTTACATAAGAAAGAGTCTAGGTGTTAAAACAG
CTCTTGAAAGAACGTTgaaacattgttttttattgcgATGGAAAATTGAA
CCTTTCCTTTACAAACAAATGAAAGATATAAAAGGCTAGTTTTCCCTAAT
GGAAAGATTAAGGTCGTAGGTctaatttttattcttttgaggTCGAATAA
ACACCAAGAGAAGAAATTTCTCTAGCTTTCACAAGCTTCTGATGAATAAT
ctttctgaaaattaaaaagcaaTCAAAAATTTAACACCTGCTTCTCTGCT
TACATTTTCAGTTTTCttcattgttttcttttcttgttaAGAAAAACTAT
TACAAGTTCCAAAATATTTCCCTCTCGTGCGTTGTGTTTAGAAAAATGCA
TGTAAATTTCCACATATTATTTTTCGTGTCATTTTAAAATATGATAAATA
TTATTTGATGAAATAATTTTCCCTTCTTTGAAGCTTCCCATCTGGTCGCG
GTGACTGGTGCAAAGTTTCCCCCTATTTTTGTTGATcctgttttttgaaa
aacaggTCCCATAGATCAACACCATATGCTCTTTTTCCTGTAGCCTGATA
TTTAGATTAATCCGGCGAAAACATTTGAAGTATTATCCATCTTGTGAAta
ttattttcaagttttcaaggTCACTAATCTTCTGAATATGTTTCTACTTT
CTTTGTAGGATTATCTGGGAGATCTATTAATTTCCATGTGTTACAATCCG
ACTTCAAGTCAGATTAATATTGTCGTGATGAAATGTACCAATTTGAAAGT
GATGGATATCACGGGAAGCTGCGGTATGTTTCTCTATTAGTTTTGATCTC
CCTTgccttttcattttattcattcattaAAAACTGACCAAAATGGTATA
AAGATGACCATGATAAAACTTTCACATACAATGTCACACGCAATTTAAGA
ATGATAATGTTTTCATTCACATTGTTCATTCCTATAGAAGCCCTCAAAAT
ATCTTTAATCCCATTGCGTACCTTTCAAACTTATCTTTGTCACGGAGAAA
AGTTTACAAAATCATAACTATTGACGAAAGCCAGTCCGAAAGATAATCGT
TTACAATTCTCTAACAAACAAATCAATCTACTAATGTTTCCTTATTCTAA
TGACCTACTACTGTCTTTTCTGGTCATGTTGTTAATTTGTCATTCGATTT
TTCCTTCGCTAGATCCGTATGTCAAAATCTACCTAGTCTATTCTGGCAAA
CGAATCGACAAGAAGAAAACGAGCATCAAACGGAGAGCGCTCAACCCAGT
ATGGAATGAGAATTTCGATTTCGACGTTCCCATTGATAAAATTCGTgaga
tttctttcattttaactgTAACAGACTTTGACCGCTTATTACCGAACGAA
GCTATCGGACAAGTGATTATTGGTTACCGGACGGCTGGTACTTCTCTTAA
ACATTGGACTGAAATGATGAATCATCCCCGCAAACCCATTGCTATGTGGC
ATAAAATCATCAAATATTGA Coding sequence (CDS) from alignment at sc0000166_pilon:245729..249848+ >XLOC_043438 ID=XLOC_043438|Name=XLOC_043438|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2658bp|location=Sequence derived from alignment at sc0000166_pilon:245729..249848+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTATCAGCTAGTCACAAATTCAAAGATGGTATCAGCTAGTCACAAAT
TCAAAGGTATCTTAAGCAACCCAGTCACCTACGTCATAGCATGTTCAATC
GTATCAACTGTTGCtttttttGCTATCTGTGCTTGGTGTTTCAAAAGGAA
GAATAAGCGAAAACGGAGTGATGATGGAGATACTGATGCTGAGGATCTTG
CAGATTACCCAGTTTCTGAAACATCTAAGCGTCCATTACTTGGGTCTTCA
TCATCAgccaaaaataaatcaaatggTTTCTCATTCCTAAATTCTTCAAA
AGATGATGGAAAATCTCGTTCACAAAATTCATTGGGTAAAGCTTCTAATG
AATCACCAGTTAATGAAATGCCTGGATGGGGGCGTAAAACATTGAAATTC
GGAAGTCCACCAGGCGATACAACATTTGAGAGCATGGGTGTACAACCAAA
AAATAAAGACTTGTCACAATCCTATGATTCTTTAGTTTCTTCCTGGGCAT
CTATTCCAGACGAGCCAGAAATTCCTACGGATAGAGGAGAAGATTTGGGT
TCTATTTATTTTAGTGTTTCATATGATGTTTATGATTTAGTATTGAAATT
GACAATTCAAAAAGCTGTTAATCTTCCAGCCAAGGACTTGTCTGGTACAA
GTGATCCTTTTGTGAAAGTATTATTATTAcctgataaaaaaaataaactt
gaaaCAAGAGTGAAAAGGAAAAAGCTGAATCCAGTATGGAATGAAGTATT
TACATTTGAGGGATTTCCCCATCAAAAGTTAGTGCAAAGGACTTTATATC
TGCAAGTTTTGGACTATGATAGATTTTCAAGGAATGATCCTATTGGTGAA
ATTGAATTGCCATTATCGGAAGTTCATCTACAGTCTGAACCTGTTCCTTT
TGTGAAGAAGTTGAGTCCATGCAAACGTTCAGCTGTATCTTAAGCAACCC
AGTCACCTACGTCATAGCATGTTCAATCGTATCAACTGTTGCtttttttG
CTATCTGTGCTTGGTGTTTCAAAAGGAAGAATAAGCGAAAACGGAGTGAT
GATGGAGATACTGATGCTGAGGATCTTGCAGATTACCCAGTTTCTGAAAC
ATCTAAGCGTCCATTACTTGGGTCTTCATCATCAgccaaaaataaatcaa
atggTTTCTCATTCCTAAATTCTTCAAAAGATGATGGAAAATCTCGTTCA
CAAAATTCATTGGGTAAAGCTTCTAATGAATCACCAGTTAATGAAATGCC
TGGATGGGGGCGTAAAACATTGAAATTCGGAAGTCCACCAGGCGATACAA
CATTTGAGAGCATGGGTGTACAACCAAAAAATAAAGACTTGTCACAATCC
TATGATTCTTTAGTTTCTTCCTGGGCATCTATTCCAGACGAGCCAGAAAT
TCCTACGGATAGAGGAGAAGATTTGGGTTCTATTTATTTTAGTGTTTCAT
ATGATGTTTATGATTTAGTATTGAAATTGACAATTCAAAAAGCTGTTAAT
CTTCCAGCCAAGGACTTGTCTGGTACAAGTGATCCTTTTGTGAAAGTATT
ATTATTAcctgataaaaaaaataaacttgaaaCAAGAGTGAAAAGGAAAA
AGCTGAATCCAGTATGGAATGAAGTATTTACATTTGAGGGATTTCCCCAT
CAAAAGTTAGTGCAAAGGACTTTATATCTGCAAGTTTTGGACTATGATAG
ATTTTCAAGGAATGATCCTATTGGTGAAATTGAATTGCCATTATCGGAAG
TTCATCTACAGTCTGAACCTGTTCCTTTTGTGAAGAAGTTGAGTCCATGC
AAACGTTCAGCTGATTATCTGGGAGATCTATTAATTTCCATGTGTTACAA
TCCGACTTCAAGTCAGATTAATATTGTCGTGATGAAATGTACCAATTTGA
AAGTGATGGATATCACGGGAAGCTGCGGATTATCTGGGAGATCTATTAAT
TTCCATGTGTTACAATCCGACTTCAAGTCAGATTAATATTGTCGTGATGA
AATGTACCAATTTGAAAGTGATGGATATCACGGGAAGCTGCGATCCGTAT
GTCAAAATCTACCTAGTCTATTCTGGCAAACGAATCGACAAGAAGAAAAC
GAGCATCAAACGGAGAGCGCTCAACCCAGTATGGAATGAGAATTTCGATT
TCGACGTTCCCATTGATAAAATTCGTgagatttctttcattttaactgTA
ACAGACTTTGACCGCTTATTACCGAACGAAGCTATCGGACAAGTGATTAT
TGGTTACCGGACGGCTGGTACTTCTCTTAAACATTGGACTGAAATGATGA
ATCATCCCCGCAAACCCATTGCTATGTGGCATAAAATCATCAAATATTGA
ATCCGTATGTCAAAATCTACCTAGTCTATTCTGGCAAACGAATCGACAAG
AAGAAAACGAGCATCAAACGGAGAGCGCTCAACCCAGTATGGAATGAGAA
TTTCGATTTCGACGTTCCCATTGATAAAATTCGTgagatttctttcattt
taactgTAACAGACTTTGACCGCTTATTACCGAACGAAGCTATCGGACAA
GTGATTATTGGTTACCGGACGGCTGGTACTTCTCTTAAACATTGGACTGA
AATGATGAATCATCCCCGCAAACCCATTGCTATGTGGCATAAAATCATCA
AATATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000166_pilon | genome | sc0000166_pilon:245729..249848 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1024-1329:3815 |
| Aaloc | 907-1020:3309 |
| Aaloc | 31-906:1473 |
| Aaloc | 1-27:1 |
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